Wall clock time and date at job start Tue Mar 31 2020 23:03:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35994 * 117.00267 * 2 1 4 4 C 1.38561 * 120.06226 * 359.97438 * 3 2 1 5 5 C 1.38345 * 119.98564 * 180.02562 * 4 3 2 6 6 Cl 1.73599 * 119.93973 * 180.02562 * 5 4 3 7 7 C 1.38358 * 120.11797 * 359.97438 * 5 4 3 8 8 C 1.50701 * 119.93303 * 180.02562 * 7 5 4 9 9 N 1.46895 * 109.47321 * 75.65470 * 8 7 5 10 10 C 1.47441 * 110.99790 * 75.38548 * 9 8 7 11 11 C 1.54316 * 107.23725 * 123.25681 * 10 9 8 12 12 C 1.55145 * 103.01906 * 22.28109 * 11 10 9 13 13 O 1.42896 * 110.98722 * 82.47923 * 12 11 10 14 14 C 1.50697 * 110.98956 * 206.25815 * 12 11 10 15 15 H 1.08006 * 120.00055 * 115.94729 * 14 12 11 16 16 C 1.37879 * 120.00030 * 295.93923 * 14 12 11 17 17 N 1.31508 * 120.00177 * 4.64487 * 16 14 12 18 18 Si 1.86797 * 119.99967 * 184.63933 * 16 14 12 19 19 H 1.48496 * 109.47166 * 94.94625 * 18 16 14 20 20 H 1.48501 * 109.47352 * 214.94757 * 18 16 14 21 21 H 1.48508 * 109.47170 * 334.94623 * 18 16 14 22 22 C 1.47851 * 111.00065 * 196.22429 * 9 8 7 23 23 C 1.38241 * 120.13520 * 0.02562 * 7 5 4 24 24 C 1.38558 * 120.01127 * 359.72534 * 23 7 5 25 25 O 1.36017 * 120.06308 * 180.27702 * 24 23 7 26 26 C 1.42901 * 116.99822 * 0.27314 * 25 24 23 27 27 H 1.09000 * 109.46841 * 60.00464 * 1 2 3 28 28 H 1.09004 * 109.46959 * 300.00527 * 1 2 3 29 29 H 1.09002 * 109.47248 * 180.02562 * 1 2 3 30 30 H 1.07995 * 120.00911 * 0.02562 * 4 3 2 31 31 H 1.09004 * 109.47124 * 195.66330 * 8 7 5 32 32 H 1.09006 * 109.46742 * 315.65806 * 8 7 5 33 33 H 1.08999 * 109.88694 * 242.66141 * 10 9 8 34 34 H 1.09008 * 109.89167 * 3.84795 * 10 9 8 35 35 H 1.08999 * 110.71100 * 140.66621 * 11 10 9 36 36 H 1.09005 * 110.70603 * 263.72601 * 11 10 9 37 37 H 0.96696 * 114.00235 * 54.24672 * 13 12 11 38 38 H 0.96994 * 120.00599 * 179.97438 * 17 16 14 39 39 H 1.09004 * 110.37262 * 332.46730 * 22 9 8 40 40 H 1.08990 * 110.37126 * 94.81113 * 22 9 8 41 41 H 1.07993 * 119.99463 * 180.02562 * 23 7 5 42 42 H 1.08999 * 109.46881 * 59.99894 * 26 25 24 43 43 H 1.09001 * 109.47171 * 180.02562 * 26 25 24 44 44 H 1.08997 * 109.47376 * 300.00508 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 1.2931 2.3746 -0.0005 5 6 1.9229 3.6064 -0.0011 6 17 0.9779 5.0626 -0.0011 7 6 3.3045 3.6797 -0.0005 8 6 3.9862 5.0238 -0.0005 9 7 3.9012 5.6160 1.3410 10 6 4.8476 4.9663 2.2663 11 6 5.7571 6.0724 2.8413 12 6 4.9104 7.3577 2.6462 13 8 3.9619 7.5113 3.7038 14 6 5.7932 8.5740 2.5356 15 1 5.8151 9.1439 1.6184 16 6 6.5728 8.9595 3.6055 17 7 6.6163 8.2158 4.6893 18 14 7.5675 10.5381 3.5155 19 1 6.7950 11.6458 4.1330 20 1 8.8473 10.3592 4.2472 21 1 7.8511 10.8642 2.0947 22 6 4.2003 7.0634 1.3013 23 6 4.0610 2.5226 0.0000 24 6 3.4359 1.2861 0.0058 25 8 4.1792 0.1469 0.0120 26 6 5.6000 0.2994 0.0183 27 1 -0.3633 0.5138 -0.8900 28 1 -0.3633 0.5139 0.8900 29 1 -0.3634 -1.0277 0.0005 30 1 0.2146 2.3195 -0.0005 31 1 5.0332 4.9001 -0.2776 32 1 3.4953 5.6801 -0.7192 33 1 4.3012 4.4786 3.0736 34 1 5.4493 4.2341 1.7277 35 1 5.9546 5.8979 3.8990 36 1 6.6904 6.1337 2.2814 37 1 4.3523 7.4911 4.5883 38 1 7.1650 8.4868 5.4418 39 1 4.8615 7.2913 0.4652 40 1 3.2782 7.6394 1.2250 41 1 5.1392 2.5825 0.0008 42 1 5.9022 0.8512 0.9084 43 1 6.0709 -0.6836 0.0224 44 1 5.9106 0.8470 -0.8715 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000602698708.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 23:03:54 Heat of formation + Delta-G solvation = -92.108164 kcal Electronic energy + Delta-G solvation = -28104.652645 eV Core-core repulsion = 24049.020590 eV Total energy + Delta-G solvation = -4055.632055 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 341.123 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -40.74161 -38.67371 -38.51633 -37.29790 -35.89358 -34.60357 -32.11810 -31.56133 -30.27193 -29.22598 -28.06913 -27.43805 -27.36307 -25.24333 -23.87732 -22.37841 -21.56722 -19.95987 -19.53825 -18.53460 -17.24833 -17.09451 -16.92478 -16.24410 -15.39979 -15.21123 -15.14634 -14.90341 -14.83367 -14.61876 -14.57904 -13.93588 -13.66615 -13.15550 -12.90563 -12.63225 -12.43999 -12.19074 -12.07692 -11.99640 -11.67612 -11.52973 -11.36356 -11.30012 -11.23129 -11.12361 -10.96703 -10.74534 -10.50393 -10.39704 -10.37371 -10.24062 -9.82790 -9.18906 -8.79503 -8.58410 -8.05698 -7.79230 -7.57608 -6.19049 -4.26037 1.08573 1.22432 2.33724 3.08900 3.12766 3.22885 3.30519 3.33129 3.47627 4.30902 4.53793 4.69252 4.82308 4.86542 4.95972 4.97380 5.04611 5.06921 5.09502 5.16595 5.28668 5.36302 5.39653 5.55491 5.64000 5.75944 5.84211 5.97057 6.02282 6.09826 6.16622 6.35827 6.42568 6.48709 6.69984 6.85853 6.89391 7.08324 7.38575 7.39019 7.49836 7.65403 7.76018 7.84240 8.21324 8.75428 9.42443 9.52311 10.88101 Molecular weight = 341.12amu Principal moments of inertia in cm(-1) A = 0.017585 B = 0.003037 C = 0.002758 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1591.863577 B = 9217.320175 C =10148.617306 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.305 6.305 3 C 0.104 3.896 4 C -0.168 4.168 5 C -0.009 4.009 6 Cl -0.051 7.051 7 C -0.052 4.052 8 C 0.087 3.913 9 N -0.513 5.513 10 C 0.045 3.955 11 C -0.145 4.145 12 C 0.253 3.747 13 O -0.575 6.575 14 C -0.534 4.534 15 H 0.060 0.940 16 C 0.073 3.927 17 N -0.893 5.893 18 Si 0.898 3.102 19 H -0.279 1.279 20 H -0.286 1.286 21 H -0.274 1.274 22 C 0.061 3.939 23 C -0.155 4.155 24 C 0.101 3.899 25 O -0.306 6.306 26 C 0.025 3.975 27 H 0.055 0.945 28 H 0.056 0.944 29 H 0.100 0.900 30 H 0.143 0.857 31 H 0.042 0.958 32 H 0.083 0.917 33 H 0.063 0.937 34 H 0.033 0.967 35 H 0.076 0.924 36 H 0.055 0.945 37 H 0.374 0.626 38 H 0.265 0.735 39 H 0.046 0.954 40 H 0.072 0.928 41 H 0.141 0.859 42 H 0.058 0.942 43 H 0.100 0.900 44 H 0.055 0.945 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.101 -15.782 -10.244 20.111 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.218 6.218 3 C 0.058 3.942 4 C -0.188 4.188 5 C -0.037 4.037 6 Cl -0.022 7.022 7 C -0.054 4.054 8 C -0.041 4.041 9 N -0.237 5.237 10 C -0.083 4.083 11 C -0.184 4.184 12 C 0.213 3.787 13 O -0.382 6.382 14 C -0.572 4.572 15 H 0.078 0.922 16 C -0.130 4.130 17 N -0.532 5.532 18 Si 0.725 3.275 19 H -0.205 1.205 20 H -0.212 1.212 21 H -0.199 1.199 22 C -0.066 4.066 23 C -0.175 4.175 24 C 0.056 3.944 25 O -0.220 6.220 26 C -0.070 4.070 27 H 0.073 0.927 28 H 0.075 0.925 29 H 0.118 0.882 30 H 0.160 0.840 31 H 0.061 0.939 32 H 0.102 0.898 33 H 0.081 0.919 34 H 0.052 0.948 35 H 0.095 0.905 36 H 0.073 0.927 37 H 0.222 0.778 38 H 0.075 0.925 39 H 0.064 0.936 40 H 0.090 0.910 41 H 0.158 0.842 42 H 0.076 0.924 43 H 0.118 0.882 44 H 0.073 0.927 Dipole moment (debyes) X Y Z Total from point charges -8.006 -16.094 -10.407 20.770 hybrid contribution 1.782 1.293 0.258 2.217 sum -6.224 -14.800 -10.150 18.995 Atomic orbital electron populations 1.23086 0.78569 1.03937 1.01440 1.86171 1.21019 1.25471 1.89160 1.17953 0.88907 0.84808 1.02562 1.20849 1.00339 0.89884 1.07706 1.20300 0.91301 0.87512 1.04543 1.98377 1.71606 1.35548 1.96619 1.19481 0.91424 0.95547 0.98952 1.21168 0.97795 0.91623 0.93489 1.63585 1.50645 1.03961 1.05520 1.22868 0.93006 0.96770 0.95610 1.23293 0.97632 0.95909 1.01545 1.19510 0.84570 0.91201 0.83449 1.86175 1.37851 1.96262 1.17960 1.21533 1.24049 1.11781 0.99876 0.92193 1.24974 0.95885 0.96814 0.95291 1.69761 1.40760 1.37365 1.05359 0.86497 0.79244 0.83533 0.78187 1.20501 1.21215 1.19861 1.22994 0.99258 0.86168 0.98146 1.20927 1.00405 0.90010 1.06151 1.18187 0.88178 0.86055 1.02012 1.86156 1.18742 1.28038 1.89024 1.23096 0.78514 1.03861 1.01570 0.92662 0.92523 0.88205 0.83964 0.93937 0.89845 0.91871 0.94829 0.90540 0.92665 0.77785 0.92514 0.93619 0.91011 0.84161 0.92387 0.88193 0.92651 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.20 9.81 101.05 0.99 1.19 16 2 O -0.30 -3.77 10.28 -34.24 -0.35 -4.13 16 3 C 0.10 1.38 6.70 -39.12 -0.26 1.12 16 4 C -0.17 -2.13 8.82 -39.42 -0.35 -2.48 16 5 C -0.01 -0.13 6.31 -39.50 -0.25 -0.38 16 6 Cl -0.05 -0.74 27.54 -51.86 -1.43 -2.17 16 7 C -0.05 -0.77 5.05 -104.58 -0.53 -1.29 16 8 C 0.09 1.38 4.05 -4.98 -0.02 1.36 16 9 N -0.51 -9.75 5.03 -232.69 -1.17 -10.92 16 10 C 0.05 0.87 6.51 -2.84 -0.02 0.85 16 11 C -0.14 -3.27 5.38 -24.91 -0.13 -3.40 16 12 C 0.25 6.22 0.86 -89.63 -0.08 6.14 16 13 O -0.58 -15.06 13.13 -35.23 -0.46 -15.52 16 14 C -0.53 -14.23 8.25 -34.44 -0.28 -14.51 16 15 H 0.06 1.59 7.79 -52.48 -0.41 1.18 16 16 C 0.07 1.92 5.32 -17.82 -0.09 1.83 16 17 N -0.89 -23.78 10.86 55.43 0.60 -23.18 16 18 Si 0.90 20.66 29.54 -169.99 -5.02 15.64 16 19 H -0.28 -6.46 7.11 56.52 0.40 -6.06 16 20 H -0.29 -6.53 7.11 56.52 0.40 -6.13 16 21 H -0.27 -6.25 7.11 56.52 0.40 -5.84 16 22 C 0.06 1.31 5.81 -2.29 -0.01 1.30 16 23 C -0.16 -2.06 8.24 -39.46 -0.33 -2.38 16 24 C 0.10 1.38 6.70 -39.13 -0.26 1.11 16 25 O -0.31 -3.92 10.28 -34.32 -0.35 -4.28 16 26 C 0.02 0.22 9.81 101.05 0.99 1.21 16 27 H 0.05 0.37 7.66 -51.93 -0.40 -0.03 16 28 H 0.06 0.41 7.66 -51.93 -0.40 0.02 16 29 H 0.10 0.57 8.14 -51.93 -0.42 0.14 16 30 H 0.14 1.47 6.30 -52.49 -0.33 1.14 16 31 H 0.04 0.64 7.60 -51.93 -0.39 0.24 16 32 H 0.08 1.28 7.40 -51.93 -0.38 0.89 16 33 H 0.06 1.27 8.14 -51.93 -0.42 0.85 16 34 H 0.03 0.58 6.96 -51.92 -0.36 0.21 16 35 H 0.08 1.85 7.51 -51.93 -0.39 1.46 16 36 H 0.05 1.27 8.04 -51.93 -0.42 0.85 16 37 H 0.37 9.79 7.63 45.56 0.35 10.14 16 38 H 0.27 6.78 8.31 -40.82 -0.34 6.44 16 39 H 0.05 0.94 7.70 -51.93 -0.40 0.54 16 40 H 0.07 1.59 8.14 -51.93 -0.42 1.17 16 41 H 0.14 1.62 6.24 -52.49 -0.33 1.29 16 42 H 0.06 0.50 7.67 -51.93 -0.40 0.10 16 43 H 0.10 0.66 8.14 -51.93 -0.42 0.24 16 44 H 0.05 0.43 7.65 -51.93 -0.40 0.03 16 LS Contribution 370.32 15.07 5.58 5.58 Total: -1.00 -29.72 370.32 -8.72 -38.44 By element: Atomic # 1 Polarization: 14.37 SS G_CDS: -5.48 Total: 8.88 kcal Atomic # 6 Polarization: -7.71 SS G_CDS: -0.63 Total: -8.34 kcal Atomic # 7 Polarization: -33.54 SS G_CDS: -0.57 Total: -34.10 kcal Atomic # 8 Polarization: -22.76 SS G_CDS: -1.17 Total: -23.93 kcal Atomic # 14 Polarization: 20.66 SS G_CDS: -5.02 Total: 15.64 kcal Atomic # 17 Polarization: -0.74 SS G_CDS: -1.43 Total: -2.17 kcal Total LS contribution 5.58 Total: 5.58 kcal Total: -29.72 -8.72 -38.44 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000602698708.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -53.670 kcal (2) G-P(sol) polarization free energy of solvation -29.715 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -83.385 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.723 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.438 kcal (6) G-S(sol) free energy of system = (1) + (5) -92.108 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds