corina     4.2.0 0026  27.09.2018  elisfink  01. 04. 2020 03:24  gimel2.cluster.ucsf.bkslab.org

Input file type  SMILES
Output file type SYBYL MOL2

INFORMATION corina(): Annual license expires on August 9, 2022

Options:
   Writing added hydrogen atoms
   Generating multiple ring conformations
      Generating a maximum of 1 ring conformations
      Inverting flippy ring nitrogen atoms
      Applying an energy window of 6.0 kJ/mol
      Setting RMS for similar conformations set to 0.30 A
   Canonicalizing molecules before 3D generation
   Max. atoms per fragment: 999

Standard values, version 3.4 January, 2006 
Ring templates, version 3.0 March, 2001 
Torsion angle library version December, 1999 (1088 patterns), all rights CCDC, Cambridge, UK
International Chemical Identifier (InChI) Software version 1.05 (January 2017), copyright (C) IUPAC and InChI Trust Limited

*** RECORD no.:  1 read ***********************
   Name ZINC001099490232
   32 atoms

ERROR allcis(): No suited stereo descriptors for bridge 17- -7 (half-defined)
                17-2-4-7
ERROR gen3d(): Unable to build a 3D structure.
WARNING gen3d(): Re-ordering CT to build 3D structure (2).

ERROR allcis(): No suited stereo descriptors for bridge 1- -4 (half-defined)
                1-6-38-4
ERROR gen3d(): Unable to build a 3D structure.
WARNING gen3d(): Re-ordering CT to build 3D structure (3).

ERROR allcis(): No suited stereo descriptors for bridge 32- -45 (half-defined)
                32-10-20-45
ERROR gen3d(): Unable to build a 3D structure.
WARNING gen3d(): Re-ordering CT to build 3D structure (4).

ERROR allcis(): No suited stereo descriptors for bridge 17- -9 (half-defined)
                17-47-6-9
ERROR gen3d(): Unable to build a 3D structure.
WARNING gen3d(): Re-ordering CT to build 3D structure (5).

ERROR allcis(): No suited stereo descriptors for bridge 30- -36 (half-defined)
                30-6-29-36
ERROR gen3d(): Unable to build a 3D structure.
WARNING gen3d(): Re-ordering CT to build 3D structure (6).

ERROR allcis(): No suited stereo descriptors for bridge 14- -52 (half-defined)
                14-35-30-52
ERROR gen3d(): Unable to build a 3D structure.
WARNING gen3d(): Re-ordering CT to build 3D structure (7).

ERROR allcis(): No suited stereo descriptors for bridge 52- -33 (half-defined)
                52-47-5-33
ERROR gen3d(): Unable to build a 3D structure.
WARNING gen3d(): Re-ordering CT to build 3D structure (8).

ERROR allcis(): No suited stereo descriptors for bridge 34- -13 (half-defined)
                34-27-10-13
ERROR gen3d(): Unable to build a 3D structure.
WARNING gen3d(): Re-ordering CT to build 3D structure (9).

ERROR allcis(): No suited stereo descriptors for bridge 8- -19 (half-defined)
                8-12-31-19
ERROR gen3d(): Unable to build a 3D structure.
WARNING gen3d(): Re-ordering CT to build 3D structure (10).

ERROR allcis(): No suited stereo descriptors for bridge 10- -33 (half-defined)
                10-50-4-33
ERROR gen3d(): Unable to build a 3D structure.
   Elapsed time: 20 ms

1 record(s) read, 0 converted
   1 corina error(s)
   Totally elapsed time: 0 s
INFORMATION corina: Statistics over multiple ring conformer generation