Wall clock time and date at job start Wed Apr 1 2020 02:11:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.52998 * 109.46772 * 2 1 4 4 H 1.08997 * 109.47437 * 55.00057 * 3 2 1 5 5 F 1.39904 * 109.47250 * 295.00047 * 3 2 1 6 6 C 1.50698 * 109.46888 * 175.00162 * 3 2 1 7 7 O 1.21287 * 120.00009 * 44.99929 * 6 3 2 8 8 N 1.34780 * 120.00303 * 224.99724 * 6 3 2 9 9 C 1.47026 * 125.64285 * 359.97438 * 8 6 3 10 10 C 1.54321 * 107.26791 * 181.07596 * 9 8 6 11 11 C 1.55448 * 102.96961 * 22.19024 * 10 9 8 12 12 H 1.09004 * 111.00873 * 82.52495 * 11 10 9 13 13 N 1.46893 * 111.11668 * 206.46036 * 11 10 9 14 14 C 1.46897 * 111.00528 * 267.10217 * 13 11 10 15 15 C 1.50701 * 109.47533 * 180.02562 * 14 13 11 16 16 O 1.21278 * 119.99679 * 0.02562 * 15 14 13 17 17 N 1.34774 * 120.00015 * 180.02562 * 15 14 13 18 18 C 1.46492 * 120.00197 * 359.97438 * 17 15 14 19 19 C 1.53005 * 109.47200 * 90.00226 * 18 17 15 20 20 C 1.46506 * 119.99942 * 179.97438 * 17 15 14 21 21 C 1.50705 * 109.46759 * 89.99733 * 20 17 15 22 22 H 1.07996 * 120.00006 * 359.97438 * 21 20 17 23 23 C 1.37881 * 119.99822 * 180.02562 * 21 20 17 24 24 N 1.31509 * 120.00134 * 180.02562 * 23 21 20 25 25 Si 1.86806 * 119.99823 * 0.02562 * 23 21 20 26 26 H 1.48497 * 109.47380 * 90.00054 * 25 23 21 27 27 H 1.48505 * 109.46824 * 210.00135 * 25 23 21 28 28 H 1.48500 * 109.46815 * 329.99641 * 25 23 21 29 29 C 1.47419 * 125.65139 * 179.97438 * 8 6 3 30 30 H 1.09004 * 109.47520 * 299.99390 * 1 2 3 31 31 H 1.08997 * 109.47802 * 60.00113 * 1 2 3 32 32 H 1.09004 * 109.47364 * 180.02562 * 1 2 3 33 33 H 1.08998 * 109.46881 * 240.00395 * 2 1 3 34 34 H 1.08997 * 109.47059 * 119.99911 * 2 1 3 35 35 H 1.08998 * 109.88266 * 300.48971 * 9 8 6 36 36 H 1.08997 * 109.88244 * 61.50329 * 9 8 6 37 37 H 1.08998 * 110.71927 * 140.55469 * 10 9 8 38 38 H 1.08997 * 110.72400 * 263.82847 * 10 9 8 39 39 H 1.00904 * 111.00537 * 31.06231 * 13 11 10 40 40 H 1.08998 * 109.47406 * 300.00715 * 14 13 11 41 41 H 1.09000 * 109.46962 * 60.00301 * 14 13 11 42 42 H 1.09002 * 109.47332 * 210.00068 * 18 17 15 43 43 H 1.08995 * 109.47504 * 330.00377 * 18 17 15 44 44 H 1.08997 * 109.47295 * 179.97438 * 19 18 17 45 45 H 1.08993 * 109.47038 * 300.00344 * 19 18 17 46 46 H 1.09002 * 109.46659 * 60.00045 * 19 18 17 47 47 H 1.08992 * 109.47174 * 209.99561 * 20 17 15 48 48 H 1.08998 * 109.46779 * 330.00220 * 20 17 15 49 49 H 0.96996 * 120.00269 * 180.02562 * 24 23 21 50 50 H 1.09002 * 110.36926 * 274.69484 * 29 8 6 51 51 H 1.08995 * 110.36556 * 36.90768 * 29 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 1 1.6053 1.9815 0.8418 5 9 1.6698 2.0680 -1.1954 6 6 3.5418 1.4443 0.1238 7 8 4.2063 0.6811 -0.5447 8 7 4.1466 2.2941 0.9773 9 6 3.4657 3.2680 1.8431 10 6 4.5582 4.0338 2.6188 11 6 5.8185 3.8395 1.7298 12 1 5.8351 4.5605 0.9125 13 7 7.0480 3.9243 2.5290 14 6 7.5780 5.2943 2.5361 15 6 8.8367 5.3419 3.3634 16 8 9.2517 4.3336 3.8944 17 7 9.5012 6.5048 3.5132 18 6 9.0001 7.7226 2.8713 19 6 8.0421 8.4432 3.8221 20 6 10.7245 6.5512 4.3179 21 6 11.9158 6.2749 3.4372 22 1 11.7756 6.0835 2.3836 23 6 13.1846 6.2654 3.9768 24 7 14.2243 6.0249 3.2082 25 14 13.4268 6.5943 5.7997 26 1 13.3688 5.3119 6.5461 27 1 14.7498 7.2335 6.0158 28 1 12.3546 7.4992 6.2861 29 6 5.6004 2.4011 1.1975 30 1 -0.3634 0.5137 0.8900 31 1 -0.3634 0.5138 -0.8899 32 1 -0.3634 -1.0277 0.0005 33 1 1.8933 -0.5138 -0.8900 34 1 1.8933 -0.5138 0.8900 35 1 2.8866 3.9631 1.2353 36 1 2.8082 2.7484 2.5400 37 1 4.3038 5.0904 2.7012 38 1 4.7107 3.5948 3.6048 39 1 6.8921 3.5920 3.4690 40 1 7.8029 5.6023 1.5150 41 1 6.8360 5.9687 2.9638 42 1 9.8374 8.3787 2.6332 43 1 8.4726 7.4595 1.9546 44 1 7.6697 9.3495 3.3447 45 1 7.2049 7.7872 4.0603 46 1 8.5697 8.7063 4.7389 47 1 10.8264 7.5387 4.7676 48 1 10.6712 5.7977 5.1038 49 1 15.1168 6.0178 3.5878 50 1 5.9271 1.6694 1.9364 51 1 6.1375 2.2582 0.2599 RHF calculation, no. of doubly occupied orbitals= 66 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001184889792.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Wed Apr 1 2020 02:11:56 Heat of formation + Delta-G solvation = -112.164048 kcal Electronic energy + Delta-G solvation = -30251.342558 eV Core-core repulsion = 25907.318806 eV Total energy + Delta-G solvation = -4344.023751 eV No. of doubly occupied orbitals = 66 Molecular weight (most abundant/longest-lived isotopes) = 343.206 amu Computer time = 1.23 seconds Orbital eigenvalues (eV) -48.30120 -40.45597 -39.31060 -38.11503 -35.57556 -34.93100 -34.44231 -32.72885 -31.19908 -30.38001 -29.65013 -28.44695 -27.47980 -25.46894 -23.76018 -23.03555 -22.39673 -21.99569 -21.22733 -19.87517 -18.53315 -18.15326 -17.33972 -16.96048 -16.72552 -16.40242 -16.28491 -15.90984 -15.50743 -15.11560 -14.77557 -14.44729 -14.26627 -14.09385 -14.00960 -13.67906 -13.55305 -13.45331 -13.28153 -13.07918 -12.86319 -12.69709 -12.63432 -12.43485 -12.34430 -12.22421 -11.95591 -11.86452 -11.64330 -11.58889 -11.44928 -11.35037 -11.20277 -11.00109 -10.74711 -10.51730 -10.17194 -10.14980 -9.54522 -9.15098 -9.03533 -8.59036 -8.50375 -7.75273 -6.08319 -4.07171 2.00903 2.32909 3.27949 3.28528 3.33843 3.35647 3.55033 3.70158 3.96787 3.97699 4.11250 4.24348 4.32805 4.39033 4.40216 4.54221 4.82046 4.82729 4.92755 4.92995 4.93884 5.03976 5.14416 5.14864 5.24229 5.25169 5.34005 5.42348 5.46741 5.47602 5.52618 5.58356 5.64001 5.64749 5.68327 5.70413 5.76886 5.90429 6.09249 6.32200 6.61085 6.78398 6.93283 6.97299 7.21486 7.32313 7.59427 7.60850 8.22112 8.46907 8.92314 8.97897 9.51619 11.05103 Molecular weight = 343.21amu Principal moments of inertia in cm(-1) A = 0.023311 B = 0.001881 C = 0.001818 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1200.864778 B =14885.629974 C =15400.959908 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C -0.142 4.142 3 C 0.086 3.914 4 H 0.099 0.901 5 F -0.189 7.189 6 C 0.507 3.493 7 O -0.516 6.516 8 N -0.613 5.613 9 C 0.098 3.902 10 C -0.165 4.165 11 C 0.080 3.920 12 H 0.096 0.904 13 N -0.658 5.658 14 C 0.044 3.956 15 C 0.506 3.494 16 O -0.527 6.527 17 N -0.593 5.593 18 C 0.106 3.894 19 C -0.169 4.169 20 C 0.218 3.782 21 C -0.529 4.529 22 H 0.075 0.925 23 C 0.072 3.928 24 N -0.897 5.897 25 Si 0.876 3.124 26 H -0.274 1.274 27 H -0.285 1.285 28 H -0.267 1.267 29 C 0.114 3.886 30 H 0.057 0.943 31 H 0.062 0.938 32 H 0.065 0.935 33 H 0.088 0.912 34 H 0.084 0.916 35 H 0.073 0.927 36 H 0.073 0.927 37 H 0.086 0.914 38 H 0.083 0.917 39 H 0.355 0.645 40 H 0.099 0.901 41 H 0.056 0.944 42 H 0.085 0.915 43 H 0.067 0.933 44 H 0.061 0.939 45 H 0.049 0.951 46 H 0.059 0.941 47 H 0.029 0.971 48 H 0.035 0.965 49 H 0.264 0.736 50 H 0.080 0.920 51 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -30.212 -2.034 -1.999 30.346 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.210 4.210 2 C -0.180 4.180 3 C 0.047 3.953 4 H 0.117 0.883 5 F -0.170 7.170 6 C 0.292 3.708 7 O -0.391 6.391 8 N -0.348 5.348 9 C -0.025 4.025 10 C -0.204 4.204 11 C -0.032 4.032 12 H 0.115 0.885 13 N -0.290 5.290 14 C -0.088 4.088 15 C 0.292 3.708 16 O -0.403 6.403 17 N -0.326 5.326 18 C -0.019 4.019 19 C -0.227 4.227 20 C 0.097 3.903 21 C -0.567 4.567 22 H 0.093 0.907 23 C -0.130 4.130 24 N -0.535 5.535 25 Si 0.703 3.297 26 H -0.199 1.199 27 H -0.211 1.211 28 H -0.192 1.192 29 C -0.009 4.009 30 H 0.077 0.923 31 H 0.081 0.919 32 H 0.084 0.916 33 H 0.107 0.893 34 H 0.103 0.897 35 H 0.092 0.908 36 H 0.091 0.909 37 H 0.105 0.895 38 H 0.102 0.898 39 H 0.176 0.824 40 H 0.117 0.883 41 H 0.074 0.926 42 H 0.104 0.896 43 H 0.085 0.915 44 H 0.080 0.920 45 H 0.068 0.932 46 H 0.078 0.922 47 H 0.047 0.953 48 H 0.053 0.947 49 H 0.074 0.926 50 H 0.098 0.902 51 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges -29.016 -3.246 -2.653 29.317 hybrid contribution -0.329 0.859 1.428 1.698 sum -29.345 -2.387 -1.225 29.467 Atomic orbital electron populations 1.21775 0.93981 1.02782 1.02511 1.22008 0.97376 0.93407 1.05209 1.21635 0.91650 0.96427 0.85608 0.88305 1.92890 1.91964 1.83899 1.48219 1.20640 0.90184 0.80373 0.79557 1.90769 1.66051 1.38859 1.43381 1.48521 1.08656 1.36996 1.40661 1.22089 0.95943 0.91298 0.93190 1.23484 0.96011 1.01277 0.99658 1.22784 0.87278 0.96747 0.96406 0.88549 1.59873 1.27751 1.21771 1.19645 1.21922 0.95444 0.89836 1.01611 1.20166 0.85101 0.83647 0.81904 1.90686 1.68097 1.33160 1.48319 1.47932 1.26475 1.07272 1.50923 1.21439 0.98087 0.87546 0.94781 1.22233 0.99488 1.00121 1.00904 1.19631 0.81962 0.96975 0.91706 1.21335 0.89476 1.48826 0.97091 0.90727 1.24866 0.95836 0.94584 0.97761 1.69894 0.98719 1.49280 1.35601 0.86853 0.77690 0.79075 0.86045 1.19931 1.21090 1.19150 1.22231 0.79223 0.96921 1.02510 0.92343 0.91853 0.91569 0.89295 0.89727 0.90848 0.90891 0.89528 0.89799 0.82401 0.88319 0.92642 0.89642 0.91475 0.91970 0.93179 0.92192 0.95324 0.94667 0.92566 0.90191 0.89446 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -0.75 9.83 37.16 0.37 -0.39 16 2 C -0.14 -0.96 5.41 -26.73 -0.14 -1.11 16 3 C 0.09 0.67 3.54 -27.89 -0.10 0.57 16 4 H 0.10 0.47 6.73 -51.93 -0.35 0.12 16 5 F -0.19 -1.87 16.75 2.25 0.04 -1.83 16 6 C 0.51 5.52 7.19 -10.98 -0.08 5.44 16 7 O -0.52 -7.75 16.86 5.55 0.09 -7.66 16 8 N -0.61 -5.64 3.33 -170.52 -0.57 -6.21 16 9 C 0.10 0.56 5.91 -3.06 -0.02 0.54 16 10 C -0.16 -0.99 6.56 -24.74 -0.16 -1.15 16 11 C 0.08 0.72 3.39 -65.40 -0.22 0.50 16 12 H 0.10 0.84 7.83 -51.93 -0.41 0.43 16 13 N -0.66 -8.12 6.04 -105.56 -0.64 -8.76 16 14 C 0.04 0.57 4.58 -4.98 -0.02 0.55 16 15 C 0.51 9.66 7.71 -10.99 -0.08 9.58 16 16 O -0.53 -12.48 15.78 5.56 0.09 -12.39 16 17 N -0.59 -11.54 2.46 -175.06 -0.43 -11.97 16 18 C 0.11 1.52 5.93 -4.04 -0.02 1.49 16 19 C -0.17 -1.91 10.24 37.16 0.38 -1.53 16 20 C 0.22 5.20 4.23 -5.19 -0.02 5.18 16 21 C -0.53 -15.10 9.94 -34.44 -0.34 -15.44 16 22 H 0.07 2.35 8.06 -52.49 -0.42 1.93 16 23 C 0.07 2.09 5.47 -17.82 -0.10 2.00 16 24 N -0.90 -27.70 13.96 55.43 0.77 -26.92 16 25 Si 0.88 21.46 27.47 -169.99 -4.67 16.79 16 26 H -0.27 -6.76 7.11 56.52 0.40 -6.36 16 27 H -0.29 -6.86 7.11 56.52 0.40 -6.46 16 28 H -0.27 -6.10 6.54 56.52 0.37 -5.73 16 29 C 0.11 1.19 6.60 -2.53 -0.02 1.18 16 30 H 0.06 0.22 8.14 -51.93 -0.42 -0.20 16 31 H 0.06 0.34 7.94 -51.93 -0.41 -0.07 16 32 H 0.07 0.28 8.14 -51.93 -0.42 -0.15 16 33 H 0.09 0.74 8.05 -51.93 -0.42 0.32 16 34 H 0.08 0.51 8.14 -51.93 -0.42 0.09 16 35 H 0.07 0.34 8.14 -51.93 -0.42 -0.08 16 36 H 0.07 0.29 7.91 -51.93 -0.41 -0.12 16 37 H 0.09 0.41 8.14 -51.93 -0.42 -0.01 16 38 H 0.08 0.50 7.76 -51.93 -0.40 0.10 16 39 H 0.36 4.38 7.90 -39.29 -0.31 4.06 16 40 H 0.10 1.21 7.35 -51.93 -0.38 0.83 16 41 H 0.06 0.56 7.18 -51.93 -0.37 0.18 16 42 H 0.09 1.32 8.07 -51.93 -0.42 0.90 16 43 H 0.07 0.79 6.44 -51.93 -0.33 0.46 16 44 H 0.06 0.55 8.14 -51.93 -0.42 0.13 16 45 H 0.05 0.51 7.22 -51.93 -0.37 0.14 16 46 H 0.06 0.75 8.14 -51.93 -0.42 0.33 16 47 H 0.03 0.65 7.13 -51.93 -0.37 0.28 16 48 H 0.04 0.90 6.85 -51.93 -0.36 0.55 16 49 H 0.26 7.63 8.31 -40.82 -0.34 7.29 16 50 H 0.08 0.89 8.14 -51.93 -0.42 0.46 16 51 H 0.09 1.08 8.03 -51.93 -0.42 0.66 16 LS Contribution 413.81 15.07 6.24 6.24 Total: -1.00 -36.86 413.81 -8.37 -45.23 By element: Atomic # 1 Polarization: 8.78 SS G_CDS: -8.71 Total: 0.08 kcal Atomic # 6 Polarization: 7.99 SS G_CDS: -0.59 Total: 7.40 kcal Atomic # 7 Polarization: -53.00 SS G_CDS: -0.86 Total: -53.86 kcal Atomic # 8 Polarization: -20.23 SS G_CDS: 0.18 Total: -20.05 kcal Atomic # 9 Polarization: -1.87 SS G_CDS: 0.04 Total: -1.83 kcal Atomic # 14 Polarization: 21.46 SS G_CDS: -4.67 Total: 16.79 kcal Total LS contribution 6.24 Total: 6.24 kcal Total: -36.86 -8.37 -45.23 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001184889792.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -66.930 kcal (2) G-P(sol) polarization free energy of solvation -36.862 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -103.792 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.372 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -45.234 kcal (6) G-S(sol) free energy of system = (1) + (5) -112.164 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.23 seconds