Wall clock time and date at job start Wed Apr 1 2020 01:52:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 C 1.53003 * 109.46997 * 2 1 4 4 C 1.52996 * 109.47283 * 120.00162 * 2 1 3 5 5 H 1.09010 * 109.47155 * 305.32205 * 4 2 1 6 6 F 1.39892 * 109.47422 * 185.31859 * 4 2 1 7 7 C 1.50697 * 109.47294 * 65.31565 * 4 2 1 8 8 O 1.21287 * 120.00021 * 65.75807 * 7 4 2 9 9 N 1.34782 * 120.00280 * 245.75379 * 7 4 2 10 10 C 1.46499 * 120.00003 * 179.97438 * 9 7 4 11 11 C 1.52997 * 109.47104 * 180.02562 * 10 9 7 12 12 H 1.08991 * 110.01906 * 305.69951 * 11 10 9 13 13 C 1.53872 * 110.03089 * 67.09462 * 11 10 9 14 14 C 1.54268 * 106.60056 * 119.28373 * 13 11 10 15 15 C 1.54893 * 104.19242 * 23.60877 * 14 13 11 16 16 H 1.09002 * 110.75752 * 80.37456 * 15 14 13 17 17 N 1.46897 * 110.75228 * 203.55646 * 15 14 13 18 18 C 1.46906 * 111.00393 * 273.54707 * 17 15 14 19 19 C 1.50696 * 109.47180 * 180.02562 * 18 17 15 20 20 O 1.21291 * 120.00262 * 359.97438 * 19 18 17 21 21 N 1.34776 * 119.99623 * 180.02562 * 19 18 17 22 22 C 1.37107 * 119.99738 * 180.02562 * 21 19 18 23 23 H 1.08004 * 119.99767 * 359.97438 * 22 21 19 24 24 C 1.38947 * 119.99996 * 179.97438 * 22 21 19 25 25 N 1.31417 * 119.99952 * 0.02562 * 24 22 21 26 26 Si 1.86794 * 120.00158 * 179.97438 * 24 22 21 27 27 H 1.48500 * 109.47022 * 0.02562 * 26 24 22 28 28 H 1.48504 * 109.46983 * 119.99858 * 26 24 22 29 29 H 1.48497 * 109.47478 * 240.00199 * 26 24 22 30 30 C 1.54270 * 110.03386 * 184.31040 * 11 10 9 31 31 H 1.09003 * 109.46847 * 299.99989 * 1 2 3 32 32 H 1.08997 * 109.47388 * 60.00081 * 1 2 3 33 33 H 1.08998 * 109.47123 * 179.97438 * 1 2 3 34 34 H 1.09003 * 109.46847 * 240.00011 * 2 1 3 35 35 H 1.08996 * 109.46651 * 185.01857 * 3 2 1 36 36 H 1.08997 * 109.46833 * 305.01555 * 3 2 1 37 37 H 1.08997 * 109.47099 * 65.01938 * 3 2 1 38 38 H 0.96996 * 119.99650 * 0.02562 * 9 7 4 39 39 H 1.09000 * 109.47017 * 60.00017 * 10 9 7 40 40 H 1.09008 * 109.47385 * 300.00654 * 10 9 7 41 41 H 1.09003 * 110.03215 * 238.56864 * 13 11 10 42 42 H 1.09003 * 110.03580 * 359.94888 * 13 11 10 43 43 H 1.09002 * 110.48782 * 142.28582 * 14 13 11 44 44 H 1.09002 * 110.48830 * 264.92920 * 14 13 11 45 45 H 1.00899 * 111.00449 * 37.50486 * 17 15 14 46 46 H 1.08997 * 109.46750 * 300.00557 * 18 17 15 47 47 H 1.08997 * 109.46492 * 60.00305 * 18 17 15 48 48 H 0.97001 * 120.00570 * 359.97438 * 21 19 18 49 49 H 0.96996 * 119.99838 * 180.02562 * 25 24 22 50 50 H 1.09004 * 110.48262 * 335.78735 * 30 11 10 51 51 H 1.08999 * 110.48590 * 98.42412 * 30 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0401 -0.7213 1.2492 5 1 1.6010 -0.2654 2.1367 6 9 3.4336 -0.6163 1.3120 7 6 1.6481 -2.1750 1.1851 8 8 2.1187 -2.8927 0.3282 9 7 0.7747 -2.6776 2.0802 10 6 0.3933 -4.0907 2.0175 11 6 -0.6025 -4.4002 3.1371 12 1 -0.1876 -4.0997 4.0991 13 6 -1.9288 -3.6631 2.8815 14 6 -3.0173 -4.7480 2.7480 15 6 -2.4365 -5.9647 3.5106 16 1 -2.5809 -5.8518 4.5851 17 7 -3.0427 -7.2152 3.0345 18 6 -4.2935 -7.5000 3.7504 19 6 -4.8845 -8.7875 3.2366 20 8 -4.3196 -9.4067 2.3598 21 7 -6.0412 -9.2503 3.7505 22 6 -6.5786 -10.4220 3.2834 23 1 -6.0752 -10.9738 2.5032 24 6 -7.7709 -10.8995 3.8136 25 7 -8.3837 -10.2278 4.7625 26 14 -8.5035 -12.4954 3.1767 27 1 -7.6271 -13.0536 2.1158 28 1 -8.6122 -13.4699 4.2919 29 1 -9.8532 -12.2317 2.6164 30 6 -0.9304 -5.9076 3.1508 31 1 -0.3633 0.5139 0.8900 32 1 -0.3634 0.5138 -0.8899 33 1 -0.3633 -1.0276 -0.0005 34 1 1.8933 -0.5139 -0.8900 35 1 3.1263 1.4438 -0.0899 36 1 1.6052 1.9816 -0.8416 37 1 1.7520 1.9297 0.9315 38 1 0.3982 -2.1035 2.7653 39 1 1.2807 -4.7122 2.1379 40 1 -0.0686 -4.2999 1.0526 41 1 -2.1580 -3.0054 3.7200 42 1 -1.8627 -3.0841 1.9604 43 1 -3.9463 -4.4154 3.2112 44 1 -3.1808 -4.9975 1.6996 45 1 -3.1953 -7.1865 2.0375 46 1 -4.0882 -7.5948 4.8167 47 1 -4.9990 -6.6853 3.5873 48 1 -6.4932 -8.7550 4.4514 49 1 -9.2158 -10.5614 5.1328 50 1 -0.7564 -6.3448 2.1675 51 1 -0.3368 -6.4203 3.9077 RHF calculation, no. of doubly occupied orbitals= 66 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001316658823.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Wed Apr 1 2020 01:52:36 Heat of formation + Delta-G solvation = -149.593231 kcal Electronic energy + Delta-G solvation = -29495.853214 eV Core-core repulsion = 25150.206412 eV Total energy + Delta-G solvation = -4345.646802 eV No. of doubly occupied orbitals = 66 Molecular weight (most abundant/longest-lived isotopes) = 343.206 amu Computer time = 1.23 seconds Orbital eigenvalues (eV) -48.32028 -40.25838 -39.02354 -38.02422 -36.12096 -35.53801 -34.07920 -33.42006 -31.22331 -30.11889 -28.81960 -28.05631 -27.57943 -25.94272 -24.49859 -23.58033 -21.80276 -20.88660 -20.45846 -20.02147 -19.22585 -18.24928 -17.89367 -17.21914 -16.53807 -16.37245 -16.11250 -15.75149 -15.21702 -15.13023 -14.81447 -14.70457 -14.52687 -14.40133 -13.99298 -13.61737 -13.51582 -13.40412 -13.28126 -13.10281 -12.79945 -12.71579 -12.68980 -12.41839 -12.12170 -11.73136 -11.69543 -11.64992 -11.46126 -11.41786 -11.25080 -11.19759 -11.14677 -11.04451 -10.77661 -10.72753 -10.34576 -10.22908 -10.13407 -9.54078 -9.52420 -8.45531 -8.02418 -7.95372 -6.42366 -3.83091 2.00742 2.50256 3.16058 3.26696 3.34169 3.79486 3.90298 3.93605 4.04972 4.11734 4.22613 4.24307 4.30913 4.38337 4.54640 4.70115 4.88121 4.91712 4.93748 5.06537 5.08362 5.15850 5.20612 5.23592 5.25121 5.28207 5.29150 5.35092 5.49443 5.49776 5.52981 5.62379 5.66495 5.68052 5.68993 5.77210 5.83957 5.90913 5.98970 6.05690 6.13714 6.15585 6.29031 6.91758 7.26124 7.55047 7.64353 7.67270 8.06359 8.60866 9.17676 9.53996 10.05477 10.75468 Molecular weight = 343.21amu Principal moments of inertia in cm(-1) A = 0.031274 B = 0.001480 C = 0.001467 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 895.098610 B =18915.889790 C =19087.809295 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.116 4.116 3 C -0.147 4.147 4 C 0.087 3.913 5 H 0.099 0.901 6 F -0.187 7.187 7 C 0.491 3.509 8 O -0.519 6.519 9 N -0.721 5.721 10 C 0.124 3.876 11 C -0.105 4.105 12 H 0.079 0.921 13 C -0.118 4.118 14 C -0.158 4.158 15 C 0.085 3.915 16 H 0.084 0.916 17 N -0.661 5.661 18 C 0.051 3.949 19 C 0.440 3.560 20 O -0.583 6.583 21 N -0.564 5.564 22 C -0.299 4.299 23 H 0.104 0.896 24 C 0.022 3.978 25 N -0.902 5.902 26 Si 0.929 3.071 27 H -0.268 1.268 28 H -0.281 1.281 29 H -0.282 1.282 30 C -0.104 4.104 31 H 0.062 0.938 32 H 0.069 0.931 33 H 0.059 0.941 34 H 0.093 0.907 35 H 0.064 0.936 36 H 0.065 0.935 37 H 0.059 0.941 38 H 0.402 0.598 39 H 0.072 0.928 40 H 0.073 0.927 41 H 0.064 0.936 42 H 0.065 0.935 43 H 0.065 0.935 44 H 0.068 0.932 45 H 0.351 0.649 46 H 0.085 0.915 47 H 0.043 0.957 48 H 0.392 0.608 49 H 0.271 0.729 50 H 0.076 0.924 51 H 0.073 0.927 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 16.124 25.897 -1.765 30.557 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C -0.135 4.135 3 C -0.205 4.205 4 C 0.047 3.953 5 H 0.117 0.883 6 F -0.168 7.168 7 C 0.275 3.725 8 O -0.393 6.393 9 N -0.373 5.373 10 C 0.001 3.999 11 C -0.124 4.124 12 H 0.098 0.902 13 C -0.156 4.156 14 C -0.197 4.197 15 C -0.026 4.026 16 H 0.102 0.898 17 N -0.292 5.292 18 C -0.081 4.081 19 C 0.226 3.774 20 O -0.467 6.467 21 N -0.201 5.201 22 C -0.428 4.428 23 H 0.121 0.879 24 C -0.180 4.180 25 N -0.544 5.544 26 Si 0.757 3.243 27 H -0.192 1.192 28 H -0.207 1.207 29 H -0.208 1.208 30 C -0.142 4.142 31 H 0.081 0.919 32 H 0.088 0.912 33 H 0.078 0.922 34 H 0.111 0.889 35 H 0.083 0.917 36 H 0.084 0.916 37 H 0.078 0.922 38 H 0.236 0.764 39 H 0.090 0.910 40 H 0.091 0.909 41 H 0.083 0.917 42 H 0.083 0.917 43 H 0.084 0.916 44 H 0.087 0.913 45 H 0.171 0.829 46 H 0.103 0.897 47 H 0.061 0.939 48 H 0.225 0.775 49 H 0.081 0.919 50 H 0.095 0.905 51 H 0.092 0.908 Dipole moment (debyes) X Y Z Total from point charges 17.076 24.459 -2.483 29.933 hybrid contribution -1.509 0.469 0.263 1.602 sum 15.568 24.928 -2.220 29.473 Atomic orbital electron populations 1.21846 0.93320 1.02620 1.03062 1.21647 0.97313 0.97435 0.97106 1.21815 1.01987 0.94133 1.02541 1.21628 0.77908 0.93773 1.01948 0.88340 1.92881 1.29480 1.96700 1.97715 1.20937 0.79731 0.89951 0.81929 1.90770 1.52935 1.60371 1.35258 1.46092 1.45748 1.12325 1.33139 1.21602 0.98397 0.80413 0.99485 1.22037 0.95034 0.97241 0.98085 0.90219 1.22165 0.94083 0.97755 1.01634 1.23144 0.98408 0.96934 1.01253 1.22590 0.93818 0.87091 0.99062 0.89768 1.60056 1.26518 1.32528 1.10095 1.21680 0.90718 0.96440 0.99280 1.19843 0.83176 0.87952 0.86462 1.90527 1.62058 1.60367 1.33756 1.41875 1.20110 1.22582 1.35551 1.19767 1.04655 0.99058 1.19364 0.87862 1.25258 0.96676 0.99648 0.96375 1.69621 1.18367 1.39544 1.26836 0.85800 0.78718 0.81115 0.78717 1.19207 1.20744 1.20787 1.22296 0.95859 0.93017 1.03063 0.91920 0.91194 0.92185 0.88915 0.91734 0.91554 0.92218 0.76370 0.91000 0.90866 0.91684 0.91652 0.91586 0.91297 0.82928 0.89686 0.93911 0.77488 0.91949 0.90531 0.90801 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -0.70 9.01 37.16 0.33 -0.37 16 2 C -0.12 -0.69 2.72 -90.62 -0.25 -0.94 16 3 C -0.15 -0.69 8.94 37.16 0.33 -0.35 16 4 C 0.09 0.59 3.35 -27.89 -0.09 0.49 16 5 H 0.10 0.33 7.93 -51.92 -0.41 -0.08 16 6 F -0.19 -1.78 16.44 2.25 0.04 -1.74 16 7 C 0.49 4.48 5.93 -10.98 -0.07 4.41 16 8 O -0.52 -7.13 17.01 5.55 0.09 -7.04 16 9 N -0.72 -4.72 5.32 -60.29 -0.32 -5.04 16 10 C 0.12 0.98 4.69 -4.04 -0.02 0.96 16 11 C -0.10 -0.73 2.97 -89.50 -0.27 -0.99 16 12 H 0.08 0.47 8.14 -51.93 -0.42 0.05 16 13 C -0.12 -0.80 6.15 -25.61 -0.16 -0.96 16 14 C -0.16 -1.48 6.37 -25.07 -0.16 -1.64 16 15 C 0.09 0.95 3.18 -65.68 -0.21 0.74 16 16 H 0.08 0.91 7.90 -51.93 -0.41 0.50 16 17 N -0.66 -10.26 5.99 -105.85 -0.63 -10.89 16 18 C 0.05 0.88 6.02 -4.97 -0.03 0.85 16 19 C 0.44 10.34 7.82 -10.99 -0.09 10.26 16 20 O -0.58 -15.86 15.78 5.55 0.09 -15.77 16 21 N -0.56 -14.26 5.29 -10.96 -0.06 -14.32 16 22 C -0.30 -8.35 9.68 -14.93 -0.14 -8.49 16 23 H 0.10 3.04 7.16 -52.48 -0.38 2.66 16 24 C 0.02 0.58 5.50 -17.47 -0.10 0.49 16 25 N -0.90 -24.46 13.05 55.50 0.72 -23.73 16 26 Si 0.93 21.04 29.55 -169.99 -5.02 16.01 16 27 H -0.27 -6.08 7.11 56.52 0.40 -5.68 16 28 H -0.28 -6.27 7.11 56.52 0.40 -5.87 16 29 H -0.28 -6.27 7.11 56.52 0.40 -5.87 16 30 C -0.10 -1.00 6.06 -25.03 -0.15 -1.15 16 31 H 0.06 0.19 8.14 -51.93 -0.42 -0.23 16 32 H 0.07 0.30 8.14 -51.93 -0.42 -0.13 16 33 H 0.06 0.35 7.39 -51.93 -0.38 -0.04 16 34 H 0.09 0.72 8.08 -51.93 -0.42 0.30 16 35 H 0.06 0.35 7.84 -51.93 -0.41 -0.06 16 36 H 0.07 0.26 8.14 -51.93 -0.42 -0.17 16 37 H 0.06 0.21 8.14 -51.93 -0.42 -0.21 16 38 H 0.40 1.45 8.17 -40.82 -0.33 1.11 16 39 H 0.07 0.66 8.14 -51.93 -0.42 0.23 16 40 H 0.07 0.68 8.14 -51.92 -0.42 0.26 16 41 H 0.06 0.37 8.14 -51.93 -0.42 -0.05 16 42 H 0.06 0.43 7.59 -51.93 -0.39 0.03 16 43 H 0.07 0.63 8.14 -51.93 -0.42 0.20 16 44 H 0.07 0.71 7.82 -51.93 -0.41 0.30 16 45 H 0.35 5.70 8.01 -39.29 -0.31 5.39 16 46 H 0.08 1.35 8.09 -51.93 -0.42 0.93 16 47 H 0.04 0.66 8.13 -51.93 -0.42 0.24 16 48 H 0.39 9.43 7.90 -40.82 -0.32 9.11 16 49 H 0.27 6.92 8.31 -40.82 -0.34 6.58 16 50 H 0.08 0.82 7.85 -51.93 -0.41 0.41 16 51 H 0.07 0.72 8.14 -51.93 -0.42 0.29 16 LS Contribution 417.73 15.07 6.30 6.30 Total: -1.00 -34.03 417.73 -8.65 -42.67 By element: Atomic # 1 Polarization: 19.03 SS G_CDS: -8.79 Total: 10.24 kcal Atomic # 6 Polarization: 4.38 SS G_CDS: -1.06 Total: 3.32 kcal Atomic # 7 Polarization: -53.70 SS G_CDS: -0.29 Total: -53.98 kcal Atomic # 8 Polarization: -22.99 SS G_CDS: 0.18 Total: -22.81 kcal Atomic # 9 Polarization: -1.78 SS G_CDS: 0.04 Total: -1.74 kcal Atomic # 14 Polarization: 21.04 SS G_CDS: -5.02 Total: 16.01 kcal Total LS contribution 6.30 Total: 6.30 kcal Total: -34.03 -8.65 -42.67 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001316658823.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -106.922 kcal (2) G-P(sol) polarization free energy of solvation -34.026 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -140.947 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.646 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.672 kcal (6) G-S(sol) free energy of system = (1) + (5) -149.593 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.23 seconds