Wall clock time and date at job start Wed Apr 1 2020 02:11:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46897 * 1 3 3 C 1.46898 * 111.00299 * 2 1 4 4 C 1.46904 * 111.00035 * 123.96166 * 2 1 3 5 5 C 1.50695 * 109.47316 * 66.04135 * 4 2 1 6 6 C 1.38362 * 119.85651 * 269.72964 * 5 4 2 7 7 C 1.37948 * 120.14459 * 179.72553 * 6 5 4 8 8 C 1.39577 * 119.85427 * 0.54818 * 7 6 5 9 9 C 1.47842 * 120.14522 * 179.70674 * 8 7 6 10 10 O 1.21554 * 120.00369 * 204.85899 * 9 8 7 11 11 N 1.34785 * 120.00193 * 24.85284 * 9 8 7 12 12 C 1.46745 * 125.32650 * 5.17686 * 11 9 8 13 13 C 1.54105 * 106.62549 * 161.55981 * 12 11 9 14 14 H 1.09005 * 113.48599 * 151.38333 * 13 12 11 15 15 C 1.53965 * 109.46231 * 278.65025 * 13 12 11 16 16 N 1.46777 * 106.62627 * 138.17594 * 15 13 12 17 17 C 1.36932 * 125.33708 * 161.48539 * 16 15 13 18 18 H 1.08001 * 120.00334 * 0.02562 * 17 16 15 19 19 C 1.38811 * 120.00295 * 180.02562 * 17 16 15 20 20 N 1.31629 * 119.99714 * 359.97438 * 19 17 16 21 21 Si 1.86797 * 120.00529 * 180.02562 * 19 17 16 22 22 H 1.48500 * 109.46727 * 359.97438 * 21 19 17 23 23 H 1.48499 * 109.47445 * 119.99674 * 21 19 17 24 24 H 1.48505 * 109.47057 * 240.00168 * 21 19 17 25 25 C 1.46672 * 109.32486 * 341.48951 * 16 15 13 26 26 C 1.53729 * 107.94192 * 0.54357 * 25 16 15 27 27 H 1.08992 * 113.05864 * 140.00010 * 26 25 16 28 28 C 1.46639 * 125.33155 * 185.47673 * 11 9 8 29 29 C 1.39570 * 119.71112 * 359.72338 * 8 7 6 30 30 C 1.37964 * 119.85446 * 0.02562 * 29 8 7 31 31 H 1.09002 * 109.47341 * 59.99588 * 1 2 3 32 32 H 1.09002 * 109.47158 * 179.97438 * 1 2 3 33 33 H 1.08996 * 109.46874 * 299.99666 * 1 2 3 34 34 H 1.09003 * 109.46586 * 63.95724 * 3 2 1 35 35 H 1.08999 * 109.47315 * 183.95316 * 3 2 1 36 36 H 1.08996 * 109.47265 * 303.95745 * 3 2 1 37 37 H 1.08999 * 109.47252 * 186.04509 * 4 2 1 38 38 H 1.09002 * 109.46561 * 306.03987 * 4 2 1 39 39 H 1.08006 * 119.92147 * 359.97438 * 6 5 4 40 40 H 1.08006 * 120.07654 * 180.25129 * 7 6 5 41 41 H 1.08998 * 110.00545 * 280.99272 * 12 11 9 42 42 H 1.09002 * 110.00717 * 42.36407 * 12 11 9 43 43 H 1.08994 * 110.03204 * 257.47048 * 15 13 12 44 44 H 1.09003 * 110.02325 * 18.88864 * 15 13 12 45 45 H 0.96996 * 119.99683 * 179.97438 * 20 19 17 46 46 H 1.08995 * 109.77115 * 240.92457 * 25 16 15 47 47 H 1.08997 * 109.76829 * 120.16573 * 25 16 15 48 48 H 1.09001 * 109.76423 * 300.46477 * 28 11 9 49 49 H 1.09003 * 109.75776 * 61.17145 * 28 11 9 50 50 H 1.07997 * 120.07368 * 180.02562 * 29 8 7 51 51 H 1.07994 * 119.92755 * 180.02562 * 30 29 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9955 1.3714 0.0000 4 6 1.9954 -0.7662 1.1375 5 6 1.6369 -2.2205 0.9727 6 6 0.4518 -2.7019 1.5004 7 6 0.1150 -4.0309 1.3481 8 6 0.9780 -4.8931 0.6698 9 6 0.6265 -6.3200 0.5085 10 8 1.5023 -7.1472 0.3466 11 7 -0.6652 -6.7038 0.5412 12 6 -1.8175 -5.7987 0.6217 13 6 -3.0470 -6.6087 0.1666 14 1 -3.9803 -6.2722 0.6181 15 6 -3.0998 -6.6403 -1.3718 16 7 -3.4719 -8.0084 -1.7512 17 6 -3.9732 -8.3840 -2.9689 18 1 -4.1227 -7.6454 -3.7425 19 6 -4.2895 -9.7142 -3.2090 20 7 -4.1069 -10.6145 -2.2663 21 14 -4.9727 -10.2267 -4.8703 22 1 -5.0817 -9.0350 -5.7496 23 1 -4.0633 -11.2212 -5.4941 24 1 -6.3168 -10.8311 -4.6876 25 6 -3.2227 -8.9102 -0.6217 26 6 -2.6750 -8.0699 0.5433 27 1 -3.0753 -8.3703 1.5115 28 6 -1.1387 -8.0912 0.5080 29 6 2.1745 -4.4023 0.1449 30 6 2.4970 -3.0699 0.2996 31 1 -0.3634 0.5139 -0.8899 32 1 -0.3633 -1.0277 -0.0005 33 1 -0.3633 0.5138 0.8900 34 1 1.7044 1.8722 0.9234 35 1 3.0828 1.3432 -0.0708 36 1 1.5898 1.9163 -0.8524 37 1 3.0797 -0.6613 1.1756 38 1 1.5611 -0.3874 2.0627 39 1 -0.2127 -2.0346 2.0292 40 1 -0.8122 -4.4046 1.7569 41 1 -1.9519 -5.4566 1.6478 42 1 -1.6684 -4.9454 -0.0400 43 1 -3.8482 -5.9357 -1.7342 44 1 -2.1218 -6.3915 -1.7840 45 1 -4.3282 -11.5439 -2.4340 46 1 -2.4907 -9.6656 -0.9074 47 1 -4.1533 -9.3927 -0.3228 48 1 -0.7977 -8.5753 -0.4071 49 1 -0.7575 -8.6314 1.3747 50 1 2.8464 -5.0642 -0.3814 51 1 3.4223 -2.6888 -0.1065 RHF calculation, no. of doubly occupied orbitals= 65 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001049114277.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Wed Apr 1 2020 02:11:34 Heat of formation + Delta-G solvation = 43.531747 kcal Electronic energy + Delta-G solvation = -30250.219550 eV Core-core repulsion = 26343.716500 eV Total energy + Delta-G solvation = -3906.503050 eV No. of doubly occupied orbitals = 65 Molecular weight (most abundant/longest-lived isotopes) = 343.200 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -40.65775 -39.44820 -38.14123 -37.03547 -35.06440 -32.58082 -31.89749 -31.21866 -30.10528 -29.67281 -27.93797 -27.51441 -25.63007 -25.47381 -23.77006 -22.74626 -22.52547 -21.20107 -20.17041 -19.76510 -19.39867 -17.47298 -16.68482 -16.40074 -16.01952 -15.89909 -15.80728 -15.54962 -14.81555 -14.76063 -14.53970 -14.13804 -13.97985 -13.79204 -13.45159 -13.22866 -13.00546 -12.86716 -12.72484 -12.57885 -12.39213 -12.11619 -12.06958 -11.92603 -11.80616 -11.72270 -11.51334 -11.40291 -11.05207 -10.87891 -10.81604 -10.37850 -10.09616 -10.01515 -9.89013 -9.74166 -9.66386 -9.11328 -9.02291 -8.70052 -8.61763 -8.35951 -6.83550 -5.72701 -3.06005 0.75221 1.23280 2.82403 3.14244 3.40180 3.45829 3.48221 3.56472 3.89400 4.36898 4.47094 4.53144 4.55313 4.71011 4.78518 4.82988 4.90828 4.95692 5.05369 5.09599 5.14281 5.21603 5.26378 5.32823 5.38771 5.46286 5.47316 5.52179 5.60308 5.64667 5.67239 5.70033 5.76707 5.83802 5.92406 6.07891 6.13162 6.23349 6.26825 6.32215 6.34403 6.54632 6.57413 6.61438 6.61480 6.68584 6.74559 6.83501 7.53388 7.56130 7.70078 7.80489 8.25812 8.30099 9.21923 9.82213 10.45881 11.39119 Molecular weight = 343.20amu Principal moments of inertia in cm(-1) A = 0.015592 B = 0.002470 C = 0.002314 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1795.385679 B =11332.428284 C =12095.163740 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 N -0.542 5.542 3 C 0.024 3.976 4 C 0.091 3.909 5 C -0.062 4.062 6 C -0.123 4.123 7 C -0.099 4.099 8 C -0.121 4.121 9 C 0.568 3.432 10 O -0.540 6.540 11 N -0.602 5.602 12 C 0.107 3.893 13 C -0.111 4.111 14 H 0.100 0.900 15 C 0.145 3.855 16 N -0.602 5.602 17 C -0.228 4.228 18 H 0.078 0.922 19 C -0.008 4.008 20 N -0.922 5.922 21 Si 0.912 3.088 22 H -0.280 1.280 23 H -0.290 1.290 24 H -0.290 1.290 25 C 0.187 3.813 26 C -0.123 4.123 27 H 0.089 0.911 28 C 0.118 3.882 29 C -0.063 4.063 30 C -0.106 4.106 31 H 0.069 0.931 32 H 0.076 0.924 33 H 0.025 0.975 34 H 0.025 0.975 35 H 0.069 0.931 36 H 0.070 0.930 37 H 0.084 0.916 38 H 0.044 0.956 39 H 0.123 0.877 40 H 0.141 0.859 41 H 0.067 0.933 42 H 0.077 0.923 43 H 0.035 0.965 44 H 0.018 0.982 45 H 0.252 0.748 46 H 0.050 0.950 47 H 0.049 0.951 48 H 0.077 0.923 49 H 0.061 0.939 50 H 0.134 0.866 51 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 9.444 21.781 11.315 26.299 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.131 4.131 2 N -0.266 5.266 3 C -0.124 4.124 4 C -0.036 4.036 5 C -0.063 4.063 6 C -0.141 4.141 7 C -0.117 4.117 8 C -0.124 4.124 9 C 0.357 3.643 10 O -0.418 6.418 11 N -0.335 5.335 12 C -0.016 4.016 13 C -0.131 4.131 14 H 0.118 0.882 15 C 0.018 3.982 16 N -0.329 5.329 17 C -0.356 4.356 18 H 0.096 0.904 19 C -0.205 4.205 20 N -0.570 5.570 21 Si 0.743 3.257 22 H -0.205 1.205 23 H -0.217 1.217 24 H -0.218 1.218 25 C 0.062 3.938 26 C -0.142 4.142 27 H 0.107 0.893 28 C -0.003 4.003 29 C -0.081 4.081 30 C -0.125 4.125 31 H 0.088 0.912 32 H 0.095 0.905 33 H 0.044 0.956 34 H 0.044 0.956 35 H 0.087 0.913 36 H 0.089 0.911 37 H 0.103 0.897 38 H 0.063 0.937 39 H 0.141 0.859 40 H 0.159 0.841 41 H 0.084 0.916 42 H 0.095 0.905 43 H 0.053 0.947 44 H 0.035 0.965 45 H 0.063 0.937 46 H 0.068 0.932 47 H 0.067 0.933 48 H 0.096 0.904 49 H 0.079 0.921 50 H 0.151 0.849 51 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges 10.075 20.936 10.671 25.567 hybrid contribution -0.715 0.079 -0.126 0.730 sum 9.361 21.015 10.544 25.307 Atomic orbital electron populations 1.22517 0.86966 1.02978 1.00611 1.61974 1.08498 1.13613 1.42472 1.22398 1.00825 0.88533 1.00627 1.21106 1.00634 0.89957 0.91910 1.19865 0.94568 0.94842 0.96984 1.20965 0.96640 0.95411 1.01107 1.21877 0.99370 0.93171 0.97297 1.19929 0.96624 0.93257 1.02604 1.17969 0.81189 0.88024 0.77076 1.90774 1.47356 1.53770 1.49901 1.48129 1.04819 1.08687 1.71822 1.22295 0.85771 0.93546 0.99968 1.23014 0.96539 0.95030 0.98518 0.88204 1.21239 0.97371 0.89116 0.90450 1.44224 1.75423 1.01304 1.11903 1.19086 1.34902 0.92757 0.88832 0.90374 1.24805 1.01645 0.95858 0.98145 1.69961 1.53836 1.01367 1.31825 0.86031 0.78271 0.78281 0.83101 1.20519 1.21730 1.21752 1.21041 0.99192 0.90323 0.83249 1.23150 0.93210 0.96512 1.01372 0.89270 1.22013 0.94309 0.81735 1.02288 1.21256 0.94906 0.95351 0.96631 1.20940 0.99975 0.92729 0.98853 0.91237 0.90514 0.95615 0.95639 0.91259 0.91130 0.89721 0.93736 0.85873 0.84147 0.91552 0.90459 0.94662 0.96473 0.93742 0.93236 0.93292 0.90433 0.92072 0.84859 0.85403 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.13 9.26 60.06 0.56 0.68 16 2 N -0.54 -4.31 5.01 -252.73 -1.27 -5.58 16 3 C 0.02 0.14 9.57 60.06 0.57 0.72 16 4 C 0.09 0.67 5.11 -4.98 -0.03 0.65 16 5 C -0.06 -0.57 4.89 -104.53 -0.51 -1.08 16 6 C -0.12 -1.12 7.89 -39.64 -0.31 -1.43 16 7 C -0.10 -1.07 8.18 -39.19 -0.32 -1.39 16 8 C -0.12 -1.65 5.67 -104.97 -0.60 -2.24 16 9 C 0.57 9.68 7.63 -12.33 -0.09 9.59 16 10 O -0.54 -11.08 16.93 5.32 0.09 -10.99 16 11 N -0.60 -9.76 3.30 -173.38 -0.57 -10.33 16 12 C 0.11 1.42 4.24 -3.33 -0.01 1.40 16 13 C -0.11 -1.75 4.16 -88.26 -0.37 -2.12 16 14 H 0.10 1.39 8.14 -51.93 -0.42 0.96 16 15 C 0.14 2.91 6.49 -3.39 -0.02 2.89 16 16 N -0.60 -15.14 3.38 -171.84 -0.58 -15.72 16 17 C -0.23 -6.32 10.25 -15.06 -0.15 -6.48 16 18 H 0.08 2.11 7.83 -52.49 -0.41 1.70 16 19 C -0.01 -0.24 5.48 -17.43 -0.10 -0.33 16 20 N -0.92 -26.92 10.25 55.49 0.57 -26.35 16 21 Si 0.91 22.20 29.55 -169.99 -5.02 17.18 16 22 H -0.28 -6.61 7.11 56.52 0.40 -6.21 16 23 H -0.29 -7.15 7.11 56.52 0.40 -6.75 16 24 H -0.29 -7.07 7.11 56.52 0.40 -6.67 16 25 C 0.19 4.39 4.77 -3.57 -0.02 4.38 16 26 C -0.12 -2.16 4.01 -88.60 -0.36 -2.52 16 27 H 0.09 1.37 8.14 -51.93 -0.42 0.95 16 28 C 0.12 2.11 6.22 -3.61 -0.02 2.09 16 29 C -0.06 -0.79 9.59 -39.19 -0.38 -1.16 16 30 C -0.11 -1.09 9.68 -39.64 -0.38 -1.47 16 31 H 0.07 0.49 8.14 -51.93 -0.42 0.07 16 32 H 0.08 0.64 5.90 -51.93 -0.31 0.33 16 33 H 0.03 0.17 8.14 -51.93 -0.42 -0.26 16 34 H 0.03 0.14 8.14 -51.93 -0.42 -0.29 16 35 H 0.07 0.36 8.12 -51.93 -0.42 -0.06 16 36 H 0.07 0.39 8.14 -51.93 -0.42 -0.03 16 37 H 0.08 0.55 8.00 -51.93 -0.42 0.13 16 38 H 0.04 0.30 8.06 -51.93 -0.42 -0.12 16 39 H 0.12 0.86 8.00 -52.48 -0.42 0.44 16 40 H 0.14 1.35 4.42 -52.48 -0.23 1.11 16 41 H 0.07 0.69 6.38 -51.93 -0.33 0.36 16 42 H 0.08 0.97 6.96 -51.93 -0.36 0.61 16 43 H 0.04 0.69 8.14 -51.93 -0.42 0.26 16 44 H 0.02 0.37 7.72 -51.93 -0.40 -0.03 16 45 H 0.25 7.16 8.31 -40.82 -0.34 6.82 16 46 H 0.05 1.31 6.73 -51.93 -0.35 0.96 16 47 H 0.05 1.27 7.37 -51.93 -0.38 0.89 16 48 H 0.08 1.65 7.29 -51.93 -0.38 1.27 16 49 H 0.06 1.02 8.14 -51.93 -0.42 0.60 16 50 H 0.13 1.71 7.85 -52.49 -0.41 1.30 16 51 H 0.13 1.07 8.06 -52.49 -0.42 0.65 16 LS Contribution 394.99 15.07 5.95 5.95 Total: -1.00 -33.14 394.99 -11.55 -44.69 By element: Atomic # 1 Polarization: 7.17 SS G_CDS: -8.18 Total: -1.01 kcal Atomic # 6 Polarization: 4.70 SS G_CDS: -2.54 Total: 2.16 kcal Atomic # 7 Polarization: -56.13 SS G_CDS: -1.85 Total: -57.98 kcal Atomic # 8 Polarization: -11.08 SS G_CDS: 0.09 Total: -10.99 kcal Atomic # 14 Polarization: 22.20 SS G_CDS: -5.02 Total: 17.18 kcal Total LS contribution 5.95 Total: 5.95 kcal Total: -33.14 -11.55 -44.69 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001049114277.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 88.222 kcal (2) G-P(sol) polarization free energy of solvation -33.140 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 55.082 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.550 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -44.690 kcal (6) G-S(sol) free energy of system = (1) + (5) 43.532 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds