Wall clock time and date at job start Wed Apr 1 2020 02:19:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 C 1.50700 * 109.46924 * 2 1 4 4 N 1.30179 * 126.80184 * 275.03625 * 3 2 1 5 5 O 1.20928 * 111.60469 * 179.97438 * 4 3 2 6 6 C 1.34043 * 111.56334 * 359.75963 * 5 4 3 7 7 C 1.35446 * 106.44765 * 0.37994 * 6 5 4 8 8 C 1.50698 * 128.00359 * 179.91030 * 7 6 5 9 9 N 1.46501 * 109.47442 * 5.05916 * 8 7 6 10 10 C 1.46496 * 119.99807 * 265.09375 * 9 8 7 11 11 C 1.34771 * 119.99851 * 85.09306 * 9 8 7 12 12 O 1.21288 * 120.00300 * 359.97438 * 11 9 8 13 13 C 1.50701 * 120.00168 * 180.02562 * 11 9 8 14 14 C 1.50696 * 109.47389 * 179.97438 * 13 11 9 15 15 C 1.38298 * 119.93173 * 269.72919 * 14 13 11 16 16 C 1.38106 * 120.06672 * 179.72877 * 15 14 13 17 17 C 1.38879 * 119.93062 * 0.56237 * 16 15 14 18 18 O 1.35748 * 120.06813 * 179.68839 * 17 16 15 19 19 C 1.34821 * 116.99981 * 174.45313 * 18 17 16 20 20 H 1.08003 * 120.00279 * 5.05969 * 19 18 17 21 21 C 1.38658 * 120.00065 * 185.05536 * 19 18 17 22 22 N 1.31558 * 119.99938 * 0.02562 * 21 19 18 23 23 Si 1.86803 * 119.99922 * 179.97438 * 21 19 18 24 24 H 1.48503 * 109.47364 * 0.02562 * 23 21 19 25 25 H 1.48497 * 109.47125 * 120.00409 * 23 21 19 26 26 H 1.48501 * 109.47349 * 240.00235 * 23 21 19 27 27 C 1.38880 * 119.86069 * 359.71017 * 17 16 15 28 28 C 1.38101 * 119.93337 * 359.97438 * 27 17 16 29 29 H 1.09005 * 109.46822 * 179.97438 * 1 2 3 30 30 H 1.08998 * 109.46852 * 300.00147 * 1 2 3 31 31 H 1.09000 * 109.47411 * 60.00233 * 1 2 3 32 32 H 1.09001 * 109.47159 * 240.00266 * 2 1 3 33 33 H 1.09000 * 109.47411 * 119.99767 * 2 1 3 34 34 H 1.07995 * 126.77071 * 180.28922 * 6 5 4 35 35 H 1.09006 * 109.47078 * 245.05781 * 8 7 6 36 36 H 1.09004 * 109.47282 * 125.06292 * 8 7 6 37 37 H 1.09004 * 109.47238 * 274.80904 * 10 9 8 38 38 H 1.08995 * 109.47563 * 34.80922 * 10 9 8 39 39 H 1.09000 * 109.46709 * 154.80920 * 10 9 8 40 40 H 1.09002 * 109.46962 * 59.99923 * 13 11 9 41 41 H 1.09003 * 109.46823 * 300.00105 * 13 11 9 42 42 H 1.08002 * 119.96572 * 359.97438 * 15 14 13 43 43 H 1.08002 * 120.02993 * 180.27180 * 16 15 14 44 44 H 0.97004 * 119.99670 * 179.97438 * 22 21 19 45 45 H 1.07998 * 120.03228 * 179.97438 * 27 17 16 46 46 H 1.07996 * 119.96967 * 180.02562 * 28 27 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0323 1.4208 0.0000 4 7 2.2060 2.1866 -1.0383 5 8 2.6207 3.2777 -0.7225 6 6 2.7752 3.3808 0.6050 7 6 2.4076 2.1865 1.1277 8 6 2.3954 1.7720 2.5765 9 7 2.7419 2.9214 3.4162 10 6 4.1278 3.1231 3.8460 11 6 1.7857 3.7931 3.7933 12 8 0.6384 3.6263 3.4371 13 6 2.1422 4.9757 4.6566 14 6 0.9032 5.7877 4.9330 15 6 0.5483 6.8170 4.0803 16 6 -0.5898 7.5593 4.3278 17 6 -1.3717 7.2787 5.4407 18 8 -2.4874 8.0106 5.6901 19 6 -3.2623 7.6138 6.7195 20 1 -2.9431 6.7996 7.3533 21 6 -4.4692 8.2509 6.9647 22 7 -4.8583 9.2424 6.1924 23 14 -5.5432 7.7006 8.3905 24 1 -4.8852 6.5741 9.1000 25 1 -5.7351 8.8331 9.3316 26 1 -6.8630 7.2573 7.8739 27 6 -1.0095 6.2480 6.2982 28 6 0.1261 5.5051 6.0417 29 1 -0.3633 -1.0277 -0.0005 30 1 -0.3633 0.5139 0.8900 31 1 -0.3634 0.5138 -0.8900 32 1 1.8934 -0.5138 -0.8900 33 1 1.8934 -0.5138 0.8900 34 1 3.1252 4.2449 1.1500 35 1 3.1229 0.9754 2.7327 36 1 1.4013 1.4135 2.8435 37 1 4.3163 2.5428 4.7493 38 1 4.8044 2.7962 3.0565 39 1 4.2940 4.1805 4.0522 40 1 2.8745 5.5956 4.1393 41 1 2.5642 4.6241 5.5982 42 1 1.1596 7.0381 3.2178 43 1 -0.8687 8.3602 3.6591 44 1 -5.7028 9.6879 6.3637 45 1 -1.6153 6.0276 7.1647 46 1 0.4081 4.7032 6.7078 RHF calculation, no. of doubly occupied orbitals= 64 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000818557921.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Wed Apr 1 2020 02:19:56 Heat of formation + Delta-G solvation = 24.655143 kcal Electronic energy + Delta-G solvation = -29222.280677 eV Core-core repulsion = 25081.407319 eV Total energy + Delta-G solvation = -4140.873358 eV No. of doubly occupied orbitals = 64 Molecular weight (most abundant/longest-lived isotopes) = 344.157 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -45.10248 -40.12241 -38.85520 -36.78325 -36.17109 -35.36743 -32.82336 -32.33749 -31.32464 -31.19614 -30.13445 -28.44803 -27.03673 -25.86357 -24.93977 -24.72623 -22.14011 -21.95563 -21.15814 -20.64443 -19.13568 -17.96954 -17.82123 -17.68219 -17.04135 -16.95820 -16.19822 -15.83061 -15.23817 -14.63567 -14.57600 -14.48700 -14.22041 -13.93019 -13.70315 -13.57290 -13.43467 -13.28016 -13.12036 -12.99959 -12.87325 -12.68976 -12.55767 -12.42346 -11.89731 -11.82668 -11.80316 -11.51196 -11.25886 -11.16988 -10.84473 -10.73518 -10.58708 -10.40373 -10.06299 -9.76608 -9.55627 -9.30069 -9.02060 -8.80310 -8.13183 -7.14499 -6.42563 -4.01019 1.32809 1.99034 2.23950 2.27253 2.63053 2.79231 3.09005 3.14007 3.15740 3.21049 3.90992 3.98862 4.29237 4.42852 4.65044 4.69793 4.77888 4.83278 4.94908 4.97508 5.02443 5.07376 5.10357 5.14866 5.22426 5.28803 5.33166 5.35091 5.41317 5.49893 5.53984 5.63801 5.73767 5.75477 5.79679 5.85452 5.96976 6.22133 6.24380 6.43625 6.71622 6.92839 7.06798 7.17341 7.26340 7.38509 7.47330 7.85809 8.02837 8.08195 8.18080 9.03296 9.73956 10.75675 Molecular weight = 344.16amu Principal moments of inertia in cm(-1) A = 0.014573 B = 0.002266 C = 0.002170 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1920.857472 B =12351.554660 C =12900.909129 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C -0.044 4.044 3 C 0.027 3.973 4 N -0.364 5.364 5 O 0.097 5.903 6 C -0.044 4.044 7 C -0.210 4.210 8 C 0.196 3.804 9 N -0.630 5.630 10 C 0.076 3.924 11 C 0.507 3.493 12 O -0.508 6.508 13 C -0.077 4.077 14 C -0.173 4.173 15 C -0.059 4.059 16 C -0.191 4.191 17 C 0.157 3.843 18 O -0.178 6.178 19 C -0.390 4.390 20 H 0.092 0.908 21 C 0.038 3.962 22 N -0.863 5.863 23 Si 0.941 3.059 24 H -0.267 1.267 25 H -0.276 1.276 26 H -0.276 1.276 27 C -0.232 4.232 28 C -0.056 4.056 29 H 0.065 0.935 30 H 0.062 0.938 31 H 0.057 0.943 32 H 0.080 0.920 33 H 0.084 0.916 34 H 0.208 0.792 35 H 0.092 0.908 36 H 0.096 0.904 37 H 0.059 0.941 38 H 0.068 0.932 39 H 0.079 0.921 40 H 0.092 0.908 41 H 0.092 0.908 42 H 0.107 0.893 43 H 0.116 0.884 44 H 0.269 0.731 45 H 0.126 0.874 46 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 20.434 -16.486 -6.219 26.982 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.082 4.082 3 C -0.133 4.133 4 N -0.069 5.069 5 O 0.032 5.968 6 C -0.125 4.125 7 C -0.216 4.216 8 C 0.073 3.927 9 N -0.366 5.366 10 C -0.068 4.068 11 C 0.296 3.704 12 O -0.380 6.380 13 C -0.117 4.117 14 C -0.174 4.174 15 C -0.078 4.078 16 C -0.210 4.210 17 C 0.103 3.897 18 O -0.081 6.081 19 C -0.467 4.467 20 H 0.110 0.890 21 C -0.166 4.166 22 N -0.498 5.498 23 Si 0.766 3.234 24 H -0.191 1.191 25 H -0.202 1.202 26 H -0.201 1.201 27 C -0.251 4.251 28 C -0.074 4.074 29 H 0.084 0.916 30 H 0.081 0.919 31 H 0.076 0.924 32 H 0.099 0.901 33 H 0.103 0.897 34 H 0.225 0.775 35 H 0.110 0.890 36 H 0.114 0.886 37 H 0.077 0.923 38 H 0.087 0.913 39 H 0.097 0.903 40 H 0.110 0.890 41 H 0.111 0.889 42 H 0.125 0.875 43 H 0.134 0.866 44 H 0.079 0.921 45 H 0.144 0.856 46 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges 19.313 -16.348 -7.837 26.489 hybrid contribution -0.380 -0.297 1.596 1.668 sum 18.932 -16.645 -6.241 25.970 Atomic orbital electron populations 1.21741 0.93688 1.02324 1.02974 1.19937 0.96709 0.88006 1.03545 1.23413 1.02338 0.99272 0.88298 1.73819 1.16063 0.92745 1.24280 1.84810 1.61374 1.27244 1.23388 1.25553 1.03130 1.00451 0.83387 1.21683 1.07083 0.94805 0.97992 1.19481 1.02899 0.87768 0.82578 1.47977 1.09159 1.27072 1.52407 1.21864 0.81656 1.02920 1.00315 1.21205 0.84978 0.83677 0.80554 1.90773 1.19521 1.73650 1.54074 1.20446 0.97952 0.93827 0.99452 1.18629 0.98838 1.00583 0.99329 1.20379 0.95578 0.94646 0.97164 1.20157 0.97492 1.04608 0.98782 1.19382 0.87990 0.89792 0.92518 1.83975 1.29211 1.47055 1.47909 1.21376 1.00407 1.18734 1.06151 0.89031 1.25292 0.96465 0.95932 0.98881 1.70053 1.21742 1.20877 1.37130 0.85650 0.79527 0.78648 0.79615 1.19104 1.20161 1.20143 1.21105 1.00208 1.00665 1.03172 1.20494 0.93921 0.97159 0.95846 0.91604 0.91891 0.92356 0.90142 0.89714 0.77526 0.89032 0.88551 0.92283 0.91317 0.90269 0.89003 0.88933 0.87480 0.86562 0.92097 0.85600 0.87881 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.29 9.89 37.16 0.37 -0.93 16 2 C -0.04 -0.36 6.45 -27.88 -0.18 -0.54 16 3 C 0.03 0.29 6.58 -82.10 -0.54 -0.25 16 4 N -0.36 -4.68 12.07 33.43 0.40 -4.28 16 5 O 0.10 1.17 11.20 17.17 0.19 1.36 16 6 C -0.04 -0.44 11.62 29.74 0.35 -0.10 16 7 C -0.21 -2.14 6.22 -104.43 -0.65 -2.79 16 8 C 0.20 1.70 5.85 -5.19 -0.03 1.66 16 9 N -0.63 -5.48 2.32 -182.95 -0.42 -5.90 16 10 C 0.08 0.35 10.30 59.84 0.62 0.97 16 11 C 0.51 6.45 7.58 -10.99 -0.08 6.37 16 12 O -0.51 -9.13 15.70 5.55 0.09 -9.05 16 13 C -0.08 -0.89 4.31 -29.04 -0.13 -1.01 16 14 C -0.17 -2.91 4.38 -104.58 -0.46 -3.37 16 15 C -0.06 -1.08 9.69 -39.61 -0.38 -1.46 16 16 C -0.19 -4.17 9.99 -39.39 -0.39 -4.56 16 17 C 0.16 3.90 6.65 -39.11 -0.26 3.64 16 18 O -0.18 -5.20 9.76 0.08 0.00 -5.20 16 19 C -0.39 -11.13 9.49 30.89 0.29 -10.83 16 20 H 0.09 2.42 5.20 -52.48 -0.27 2.15 16 21 C 0.04 1.07 5.49 -17.51 -0.10 0.98 16 22 N -0.86 -25.72 13.67 55.48 0.76 -24.96 16 23 Si 0.94 20.86 29.55 -169.99 -5.02 15.84 16 24 H -0.27 -5.66 7.11 56.52 0.40 -5.26 16 25 H -0.28 -5.96 7.11 56.52 0.40 -5.56 16 26 H -0.28 -6.01 7.11 56.52 0.40 -5.61 16 27 C -0.23 -5.19 9.17 -39.39 -0.36 -5.55 16 28 C -0.06 -1.04 9.69 -39.61 -0.38 -1.43 16 29 H 0.06 0.44 8.14 -51.93 -0.42 0.02 16 30 H 0.06 0.63 8.14 -51.93 -0.42 0.20 16 31 H 0.06 0.58 8.14 -51.93 -0.42 0.15 16 32 H 0.08 0.60 8.14 -51.93 -0.42 0.17 16 33 H 0.08 0.51 8.09 -51.93 -0.42 0.09 16 34 H 0.21 1.60 7.95 -52.49 -0.42 1.18 16 35 H 0.09 0.52 8.04 -51.93 -0.42 0.10 16 36 H 0.10 1.01 7.57 -51.93 -0.39 0.61 16 37 H 0.06 0.22 8.14 -51.93 -0.42 -0.20 16 38 H 0.07 0.23 8.11 -51.93 -0.42 -0.19 16 39 H 0.08 0.29 6.27 -51.93 -0.33 -0.03 16 40 H 0.09 0.80 7.36 -51.93 -0.38 0.42 16 41 H 0.09 0.86 8.05 -51.93 -0.42 0.44 16 42 H 0.11 1.61 8.06 -52.49 -0.42 1.18 16 43 H 0.12 2.45 8.06 -52.49 -0.42 2.03 16 44 H 0.27 7.33 8.31 -40.82 -0.34 6.99 16 45 H 0.13 2.82 5.64 -52.49 -0.30 2.52 16 46 H 0.10 1.64 8.06 -52.49 -0.42 1.22 16 LS Contribution 394.41 15.07 5.94 5.94 Total: -1.00 -36.14 394.41 -6.67 -42.80 By element: Atomic # 1 Polarization: 8.92 SS G_CDS: -6.28 Total: 2.63 kcal Atomic # 6 Polarization: -16.87 SS G_CDS: -2.32 Total: -19.19 kcal Atomic # 7 Polarization: -35.88 SS G_CDS: 0.74 Total: -35.14 kcal Atomic # 8 Polarization: -13.17 SS G_CDS: 0.28 Total: -12.89 kcal Atomic # 14 Polarization: 20.86 SS G_CDS: -5.02 Total: 15.84 kcal Total LS contribution 5.94 Total: 5.94 kcal Total: -36.14 -6.67 -42.80 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000818557921.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 67.460 kcal (2) G-P(sol) polarization free energy of solvation -36.140 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 31.320 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.665 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.805 kcal (6) G-S(sol) free energy of system = (1) + (5) 24.655 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds