Wall clock time and date at job start Wed Apr 1 2020 04:16:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 H 1.08994 * 109.49670 * 2 1 4 4 C 1.53192 * 109.49195 * 239.93523 * 2 1 3 5 5 N 1.46931 * 108.77151 * 185.44585 * 4 2 1 6 6 C 1.36939 * 120.60829 * 233.58004 * 5 4 2 7 7 H 1.08002 * 119.99870 * 27.66432 * 6 5 4 8 8 C 1.38810 * 120.00054 * 207.65813 * 6 5 4 9 9 N 1.31619 * 120.00141 * 17.35606 * 8 6 5 10 10 Si 1.86803 * 119.99852 * 197.36050 * 8 6 5 11 11 H 1.48494 * 109.47187 * 60.00039 * 10 8 6 12 12 H 1.48505 * 109.46980 * 180.02562 * 10 8 6 13 13 H 1.48508 * 109.46784 * 299.99718 * 10 8 6 14 14 C 1.46929 * 118.76399 * 53.55643 * 5 4 2 15 15 C 1.53196 * 108.77651 * 306.41475 * 14 5 4 16 16 C 1.53039 * 109.31127 * 54.63342 * 15 14 5 17 17 H 1.09002 * 109.45140 * 58.64634 * 16 15 14 18 18 N 1.46496 * 109.45912 * 178.61449 * 16 15 14 19 19 C 1.34770 * 120.00345 * 275.06612 * 18 16 15 20 20 O 1.21716 * 120.00093 * 0.02562 * 19 18 16 21 21 C 1.46546 * 120.00370 * 179.97438 * 19 18 16 22 22 C 1.37961 * 126.22264 * 179.68985 * 21 19 18 23 23 C 1.39796 * 107.12709 * 179.90794 * 22 21 19 24 24 Cl 1.73600 * 126.06247 * 180.11518 * 23 22 21 25 25 C 1.35725 * 107.87593 * 0.36040 * 23 22 21 26 26 Cl 1.73595 * 125.58465 * 179.75168 * 25 23 22 27 27 N 1.35669 * 108.82811 * 359.77787 * 25 23 22 28 28 H 0.96996 * 125.69216 * 180.02562 * 27 25 23 29 29 H 1.09002 * 109.46803 * 300.00080 * 1 2 3 30 30 H 1.09004 * 109.47380 * 180.02562 * 1 2 3 31 31 H 1.09000 * 109.47667 * 59.99335 * 1 2 3 32 32 H 1.08994 * 109.59007 * 305.20424 * 4 2 1 33 33 H 1.09006 * 109.58627 * 65.63076 * 4 2 1 34 34 H 0.97001 * 119.99897 * 179.97438 * 9 8 6 35 35 H 1.09004 * 109.59062 * 186.62829 * 14 5 4 36 36 H 1.09005 * 109.58586 * 66.20256 * 14 5 4 37 37 H 1.09003 * 109.49458 * 294.68031 * 15 14 5 38 38 H 1.08997 * 109.52186 * 174.59889 * 15 14 5 39 39 H 0.97005 * 119.99971 * 95.06834 * 18 16 15 40 40 H 1.07997 * 126.43449 * 0.03700 * 22 21 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8938 1.0274 0.0000 4 6 2.0412 -0.7235 -1.2498 5 7 3.5044 -0.8295 -1.1695 6 6 4.2934 -0.3796 -2.1943 7 1 3.9466 0.4203 -2.8318 8 6 5.5391 -0.9514 -2.4139 9 7 5.8281 -2.1220 -1.8861 10 14 6.8053 -0.0595 -3.4583 11 1 7.1176 1.2551 -2.8423 12 1 8.0435 -0.8755 -3.5392 13 1 6.2611 0.1503 -4.8240 14 6 4.1052 -1.4268 0.0310 15 6 3.5708 -0.6948 1.2661 16 6 2.0408 -0.7229 1.2485 17 1 1.6969 -1.7571 1.2355 18 7 1.5266 -0.0525 2.4453 19 6 1.3985 -0.7374 3.5989 20 8 1.7105 -1.9129 3.6466 21 6 0.8847 -0.0666 4.7962 22 6 0.6964 -0.6423 6.0357 23 6 0.1951 0.3528 6.8800 24 17 -0.2140 0.1604 8.5561 25 6 0.0799 1.4947 6.1554 26 17 -0.5049 3.0158 6.7535 27 7 0.4960 1.2524 4.8871 28 1 0.5168 1.8996 4.1649 29 1 -0.3633 0.5139 0.8900 30 1 -0.3634 -1.0277 0.0005 31 1 -0.3634 0.5139 -0.8899 32 1 1.6051 -1.7212 -1.2986 33 1 1.7636 -0.1573 -2.1390 34 1 6.6984 -2.5218 -2.0398 35 1 5.1895 -1.3247 -0.0136 36 1 3.8374 -2.4820 0.0872 37 1 3.9160 0.3391 1.2539 38 1 3.9334 -1.1888 2.1675 39 1 1.2783 0.8845 2.4074 40 1 0.9002 -1.6684 6.3040 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000942541246.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Wed Apr 1 2020 04:16:59 Heat of formation + Delta-G solvation = 11.514881 kcal Electronic energy + Delta-G solvation = -25468.775073 eV Core-core repulsion = 21564.349220 eV Total energy + Delta-G solvation = -3904.425853 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 345.075 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -41.85838 -39.62805 -37.69120 -37.21693 -36.78672 -34.71752 -32.88228 -31.55824 -31.27341 -30.30994 -29.09625 -25.99709 -25.28295 -23.35633 -21.97142 -21.24809 -20.98798 -20.61198 -19.92539 -18.77816 -16.85182 -16.49044 -16.05102 -15.75488 -15.14500 -14.85398 -14.54055 -14.34046 -14.03335 -13.87584 -13.65905 -13.60402 -13.37996 -12.87679 -12.72835 -12.30360 -12.26997 -12.11556 -11.84916 -11.58614 -11.39309 -11.23494 -11.13224 -10.89493 -10.71608 -10.46487 -10.31009 -10.22041 -10.07154 -9.85686 -9.59716 -9.41391 -8.93488 -8.60769 -8.47125 -6.74663 -5.83234 -3.26225 0.86867 1.03010 1.74658 1.86281 2.75391 3.10524 3.15413 3.35305 3.41686 3.42159 4.42889 4.44856 4.54845 4.95712 5.07131 5.20749 5.26836 5.32713 5.39911 5.51735 5.76370 5.80728 5.86871 5.99436 6.02712 6.13553 6.15061 6.21128 6.34287 6.47528 6.52343 6.58938 6.69739 6.78594 6.87544 7.29949 7.43672 7.62425 7.74706 8.08214 8.39738 9.15798 9.79028 10.35050 11.25329 Molecular weight = 345.08amu Principal moments of inertia in cm(-1) A = 0.020910 B = 0.002280 C = 0.002241 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1338.758073 B =12276.900373 C =12489.228895 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.142 4.142 2 C -0.115 4.115 3 H 0.071 0.929 4 C 0.155 3.845 5 N -0.592 5.592 6 C -0.257 4.257 7 H 0.066 0.934 8 C 0.004 3.996 9 N -0.900 5.900 10 Si 0.903 3.097 11 H -0.284 1.284 12 H -0.290 1.290 13 H -0.282 1.282 14 C 0.173 3.827 15 C -0.148 4.148 16 C 0.158 3.842 17 H 0.087 0.913 18 N -0.718 5.718 19 C 0.585 3.415 20 O -0.515 6.515 21 C -0.009 4.009 22 C -0.090 4.090 23 C -0.098 4.098 24 Cl -0.029 7.029 25 C 0.094 3.906 26 Cl 0.002 6.998 27 N -0.522 5.522 28 H 0.427 0.573 29 H 0.043 0.957 30 H 0.054 0.946 31 H 0.055 0.945 32 H 0.022 0.978 33 H 0.059 0.941 34 H 0.256 0.744 35 H 0.091 0.909 36 H 0.022 0.978 37 H 0.055 0.945 38 H 0.056 0.944 39 H 0.388 0.612 40 H 0.169 0.831 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -14.114 9.183 16.822 23.801 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.200 4.200 2 C -0.136 4.136 3 H 0.089 0.911 4 C 0.028 3.972 5 N -0.314 5.314 6 C -0.387 4.387 7 H 0.083 0.917 8 C -0.195 4.195 9 N -0.544 5.544 10 Si 0.732 3.268 11 H -0.211 1.211 12 H -0.216 1.216 13 H -0.209 1.209 14 C 0.047 3.953 15 C -0.189 4.189 16 C 0.055 3.945 17 H 0.105 0.895 18 N -0.367 5.367 19 C 0.370 3.630 20 O -0.390 6.390 21 C -0.123 4.123 22 C -0.117 4.117 23 C -0.132 4.132 24 Cl -0.001 7.001 25 C -0.050 4.050 26 Cl 0.031 6.969 27 N -0.124 5.124 28 H 0.267 0.733 29 H 0.062 0.938 30 H 0.073 0.927 31 H 0.074 0.926 32 H 0.039 0.961 33 H 0.077 0.923 34 H 0.066 0.934 35 H 0.109 0.891 36 H 0.040 0.960 37 H 0.074 0.926 38 H 0.074 0.926 39 H 0.221 0.779 40 H 0.186 0.814 Dipole moment (debyes) X Y Z Total from point charges -13.772 8.398 16.828 23.310 hybrid contribution 0.462 1.524 -0.594 1.700 sum -13.309 9.922 16.234 23.219 Atomic orbital electron populations 1.21780 0.95755 1.01756 1.00723 1.21994 0.94500 1.00606 0.96513 0.91083 1.20888 0.86062 0.96682 0.93605 1.44099 0.99233 1.71463 1.16632 1.19115 0.98286 1.12512 1.08779 0.91677 1.25049 0.99908 0.95320 0.99217 1.70021 1.22065 1.14489 1.47828 0.86374 0.81098 0.79097 0.80196 1.21059 1.21588 1.20860 1.20774 0.99538 0.93136 0.81845 1.22600 0.93535 1.01656 1.01058 1.21169 0.94777 0.97006 0.81560 0.89499 1.46228 1.65950 1.13803 1.10766 1.16812 0.78462 0.86316 0.81387 1.90910 1.49628 1.14727 1.83712 1.20695 1.11229 0.82928 0.97413 1.21173 1.01159 0.99929 0.89393 1.19615 1.12182 0.93258 0.88193 1.98352 1.92446 1.97405 1.11855 1.20559 1.08588 0.89776 0.86043 1.98429 1.86285 1.26697 1.85518 1.41908 1.49961 1.11010 1.09472 0.73302 0.93798 0.92681 0.92589 0.96062 0.92296 0.93444 0.89113 0.95996 0.92641 0.92572 0.77875 0.81391 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -1.71 9.02 37.16 0.34 -1.37 16 2 C -0.12 -1.74 2.46 -90.50 -0.22 -1.97 16 3 H 0.07 1.08 8.14 -51.93 -0.42 0.65 16 4 C 0.15 3.01 5.80 -3.71 -0.02 2.99 16 5 N -0.59 -14.19 3.00 -172.31 -0.52 -14.71 16 6 C -0.26 -6.82 9.58 -15.06 -0.14 -6.97 16 7 H 0.07 1.68 7.89 -52.49 -0.41 1.27 16 8 C 0.00 0.11 4.91 -17.43 -0.09 0.03 16 9 N -0.90 -25.76 11.19 55.49 0.62 -25.14 16 10 Si 0.90 21.24 29.59 -169.99 -5.03 16.21 16 11 H -0.28 -6.61 7.11 56.52 0.40 -6.21 16 12 H -0.29 -6.91 7.11 56.52 0.40 -6.51 16 13 H -0.28 -6.56 7.11 56.52 0.40 -6.16 16 14 C 0.17 4.06 5.31 -3.71 -0.02 4.04 16 15 C -0.15 -2.78 5.65 -26.61 -0.15 -2.93 16 16 C 0.16 2.50 1.88 -67.89 -0.13 2.38 16 17 H 0.09 1.57 7.58 -51.93 -0.39 1.18 16 18 N -0.72 -8.85 4.36 -55.12 -0.24 -9.09 16 19 C 0.59 7.96 7.75 -12.91 -0.10 7.86 16 20 O -0.51 -9.07 16.54 5.17 0.09 -8.98 16 21 C -0.01 -0.09 7.06 -81.93 -0.58 -0.67 16 22 C -0.09 -0.99 10.64 -39.10 -0.42 -1.40 16 23 C -0.10 -0.98 6.66 -39.90 -0.27 -1.24 16 24 Cl -0.03 -0.27 29.12 -51.86 -1.51 -1.78 16 25 C 0.09 0.84 7.75 -16.75 -0.13 0.71 16 26 Cl 0.00 0.02 29.13 -51.86 -1.51 -1.49 16 27 N -0.52 -4.26 6.01 -6.51 -0.04 -4.29 16 28 H 0.43 2.30 8.19 -40.82 -0.33 1.96 16 29 H 0.04 0.44 7.36 -51.93 -0.38 0.06 16 30 H 0.05 0.69 8.14 -51.93 -0.42 0.27 16 31 H 0.06 0.63 8.14 -51.93 -0.42 0.20 16 32 H 0.02 0.43 8.14 -51.93 -0.42 0.01 16 33 H 0.06 1.12 7.93 -51.93 -0.41 0.71 16 34 H 0.26 7.10 8.31 -40.82 -0.34 6.76 16 35 H 0.09 2.39 6.04 -51.93 -0.31 2.08 16 36 H 0.02 0.55 8.14 -51.93 -0.42 0.13 16 37 H 0.05 1.03 8.14 -51.93 -0.42 0.61 16 38 H 0.06 1.06 8.14 -51.93 -0.42 0.64 16 39 H 0.39 3.55 7.43 -40.82 -0.30 3.25 16 40 H 0.17 1.76 8.06 -52.49 -0.42 1.34 16 LS Contribution 360.50 15.07 5.43 5.43 Total: -1.00 -30.46 360.50 -9.70 -40.16 By element: Atomic # 1 Polarization: 7.31 SS G_CDS: -5.07 Total: 2.24 kcal Atomic # 6 Polarization: 3.37 SS G_CDS: -1.93 Total: 1.45 kcal Atomic # 7 Polarization: -53.06 SS G_CDS: -0.17 Total: -53.23 kcal Atomic # 8 Polarization: -9.07 SS G_CDS: 0.09 Total: -8.98 kcal Atomic # 14 Polarization: 21.24 SS G_CDS: -5.03 Total: 16.21 kcal Atomic # 17 Polarization: -0.26 SS G_CDS: -3.02 Total: -3.28 kcal Total LS contribution 5.43 Total: 5.43 kcal Total: -30.46 -9.70 -40.16 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000942541246.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 51.677 kcal (2) G-P(sol) polarization free energy of solvation -30.460 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 21.217 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.702 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.162 kcal (6) G-S(sol) free energy of system = (1) + (5) 11.515 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds