Wall clock time and date at job start Wed Apr 1 2020 04:15:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 H 1.08998 * 110.00195 * 2 1 4 4 C 1.54330 * 109.78018 * 121.16635 * 2 1 3 5 5 C 1.55160 * 103.01973 * 97.49608 * 4 2 1 6 6 H 1.09001 * 111.00452 * 277.23516 * 5 4 2 7 7 N 1.46499 * 111.00626 * 153.38417 * 5 4 2 8 8 C 1.36929 * 120.00238 * 161.35153 * 7 5 4 9 9 H 1.07999 * 120.00396 * 359.97438 * 8 7 5 10 10 C 1.38816 * 120.00308 * 179.97438 * 8 7 5 11 11 N 1.31625 * 119.99520 * 359.97438 * 10 8 7 12 12 Si 1.86795 * 120.00167 * 179.97438 * 10 8 7 13 13 H 1.48498 * 109.47124 * 90.00043 * 12 10 8 14 14 H 1.48511 * 109.46908 * 209.99878 * 12 10 8 15 15 H 1.48495 * 109.47150 * 329.99599 * 12 10 8 16 16 C 1.54905 * 101.58047 * 35.30519 * 5 4 2 17 17 N 1.47026 * 109.88160 * 238.90671 * 2 1 3 18 18 C 1.34778 * 125.64460 * 59.56027 * 17 2 1 19 19 O 1.21713 * 120.00554 * 0.71979 * 18 17 2 20 20 C 1.46549 * 119.99424 * 180.72095 * 18 17 2 21 21 C 1.37954 * 126.22678 * 351.80142 * 20 18 17 22 22 C 1.39787 * 107.12928 * 180.28581 * 21 20 18 23 23 Cl 1.73605 * 126.06190 * 179.72000 * 22 21 20 24 24 C 1.35719 * 107.87488 * 359.57436 * 22 21 20 25 25 Cl 1.73603 * 125.58409 * 180.16498 * 24 22 21 26 26 N 1.35657 * 108.82999 * 0.43335 * 24 22 21 27 27 C 1.46504 * 125.69382 * 179.70705 * 26 24 22 28 28 H 1.08992 * 109.47167 * 179.64045 * 1 2 3 29 29 H 1.09004 * 109.46750 * 299.64106 * 1 2 3 30 30 H 1.09004 * 109.47179 * 59.63701 * 1 2 3 31 31 H 1.08996 * 110.85278 * 339.03115 * 4 2 1 32 32 H 1.09004 * 110.66925 * 215.87724 * 4 2 1 33 33 H 0.97003 * 119.99880 * 341.34608 * 7 5 4 34 34 H 0.97004 * 119.99477 * 179.97438 * 11 10 8 35 35 H 1.09000 * 110.36877 * 204.15102 * 16 5 4 36 36 H 1.09001 * 110.36488 * 81.83388 * 16 5 4 37 37 H 1.08001 * 126.43315 * 0.03006 * 21 20 18 38 38 H 1.08995 * 109.47323 * 274.29694 * 27 26 24 39 39 H 1.09001 * 109.47233 * 34.29982 * 27 26 24 40 40 H 1.09009 * 109.46868 * 154.29734 * 27 26 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.9028 1.0242 0.0000 4 6 2.0523 -0.7516 1.2426 5 6 2.3561 -2.1697 0.6913 6 1 1.4521 -2.7778 0.6577 7 7 3.3999 -2.8277 1.4811 8 6 3.5511 -4.1872 1.4188 9 1 2.9007 -4.7745 0.7877 10 6 4.5405 -4.8106 2.1668 11 7 5.3337 -4.0947 2.9355 12 14 4.7463 -6.6652 2.0823 13 1 5.6986 -7.0086 0.9958 14 1 5.2728 -7.1644 3.3781 15 1 3.4312 -7.2971 1.8060 16 6 2.8612 -1.8465 -0.7370 17 7 2.0300 -0.7140 -1.1840 18 6 1.7753 -0.3843 -2.4657 19 8 1.0871 0.5871 -2.7191 20 6 2.3270 -1.1955 -3.5544 21 6 3.2434 -2.2186 -3.4252 22 6 3.4952 -2.7104 -4.7092 23 17 4.5819 -4.0024 -5.1138 24 6 2.7369 -2.0010 -5.5831 25 17 2.6911 -2.2357 -7.3026 26 7 2.0251 -1.0747 -4.8936 27 6 1.0917 -0.1069 -5.4755 28 1 -0.3633 -1.0276 -0.0064 29 1 -0.3633 0.5083 0.8932 30 1 -0.3634 0.5195 -0.8867 31 1 1.2886 -0.7952 2.0191 32 1 2.9601 -0.2828 1.6225 33 1 3.9840 -2.3002 2.0482 34 1 6.0248 -4.5304 3.4585 35 1 2.7177 -2.7047 -1.3934 36 1 3.9123 -1.5589 -0.7116 37 1 3.6865 -2.5704 -2.5052 38 1 1.6406 0.7764 -5.8017 39 1 0.5873 -0.5574 -6.3303 40 1 0.3527 0.1801 -4.7273 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000988926195.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Wed Apr 1 2020 04:15:49 Heat of formation + Delta-G solvation = 31.568644 kcal Electronic energy + Delta-G solvation = -26011.929788 eV Core-core repulsion = 22108.373531 eV Total energy + Delta-G solvation = -3903.556256 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 345.075 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -41.77564 -39.72685 -37.47620 -36.99171 -36.49028 -34.28880 -33.34591 -31.89445 -31.39117 -28.98071 -28.40147 -26.87668 -25.63796 -24.21734 -23.13265 -21.42496 -20.91040 -19.94732 -19.18444 -17.46044 -17.34334 -16.56237 -16.22958 -15.71363 -15.42057 -14.58107 -14.50618 -14.34163 -14.07609 -13.84143 -13.42221 -13.30815 -13.21869 -13.00364 -12.88997 -12.56594 -12.38389 -12.07851 -11.94121 -11.91414 -11.61563 -11.51856 -11.23137 -11.03173 -10.93008 -10.67621 -10.59459 -10.32478 -10.03505 -9.93638 -9.77951 -9.04746 -8.90842 -8.60396 -8.29285 -7.12954 -5.87936 -3.19240 1.10196 1.24747 1.98022 2.11091 2.62986 3.22181 3.25196 3.39687 3.45962 3.46519 4.36912 4.50955 4.56159 4.82457 4.95909 4.96834 5.04045 5.16900 5.26469 5.37101 5.42021 5.49051 5.54882 5.61108 5.76437 5.78675 6.03163 6.04183 6.09566 6.15219 6.20480 6.34703 6.39612 6.45027 6.50686 6.58606 6.78059 7.58230 7.62476 8.12916 8.29409 9.41888 9.94078 10.28852 11.33835 Molecular weight = 345.08amu Principal moments of inertia in cm(-1) A = 0.009678 B = 0.004029 C = 0.002936 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2892.392897 B = 6948.198136 C = 9533.345982 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.162 4.162 2 C 0.143 3.857 3 H 0.074 0.926 4 C -0.137 4.137 5 C 0.174 3.826 6 H 0.066 0.934 7 N -0.711 5.711 8 C -0.251 4.251 9 H 0.073 0.927 10 C -0.005 4.005 11 N -0.928 5.928 12 Si 0.906 3.094 13 H -0.287 1.287 14 H -0.291 1.291 15 H -0.280 1.280 16 C 0.054 3.946 17 N -0.590 5.590 18 C 0.603 3.397 19 O -0.555 6.555 20 C -0.011 4.011 21 C -0.129 4.129 22 C -0.096 4.096 23 Cl -0.029 7.029 24 C 0.087 3.913 25 Cl -0.003 7.003 26 N -0.398 5.398 27 C 0.064 3.936 28 H 0.058 0.942 29 H 0.064 0.936 30 H 0.066 0.934 31 H 0.082 0.918 32 H 0.078 0.922 33 H 0.388 0.612 34 H 0.257 0.743 35 H 0.086 0.914 36 H 0.078 0.922 37 H 0.185 0.815 38 H 0.083 0.917 39 H 0.084 0.916 40 H 0.113 0.887 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.621 7.814 -15.843 19.239 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.220 4.220 2 C 0.040 3.960 3 H 0.092 0.908 4 C -0.176 4.176 5 C 0.062 3.938 6 H 0.084 0.916 7 N -0.351 5.351 8 C -0.382 4.382 9 H 0.091 0.909 10 C -0.202 4.202 11 N -0.575 5.575 12 Si 0.737 3.263 13 H -0.214 1.214 14 H -0.217 1.217 15 H -0.206 1.206 16 C -0.071 4.071 17 N -0.322 5.322 18 C 0.392 3.608 19 O -0.437 6.437 20 C -0.125 4.125 21 C -0.154 4.154 22 C -0.130 4.130 23 Cl -0.001 7.001 24 C -0.057 4.057 25 Cl 0.025 6.975 26 N -0.074 5.074 27 C -0.076 4.076 28 H 0.077 0.923 29 H 0.083 0.917 30 H 0.085 0.915 31 H 0.101 0.899 32 H 0.097 0.903 33 H 0.222 0.778 34 H 0.067 0.933 35 H 0.104 0.896 36 H 0.096 0.904 37 H 0.201 0.799 38 H 0.101 0.899 39 H 0.103 0.897 40 H 0.131 0.869 Dipole moment (debyes) X Y Z Total from point charges -8.162 8.279 -16.343 20.056 hybrid contribution 0.608 -1.043 -0.293 1.243 sum -7.554 7.236 -16.635 19.651 Atomic orbital electron populations 1.22147 0.94810 1.02468 1.02557 1.21551 0.94500 0.95938 0.83999 0.90792 1.23009 1.01935 0.96952 0.95701 1.21288 0.92851 0.91258 0.88430 0.91611 1.42318 1.36893 1.04969 1.50914 1.19230 1.13410 0.83118 1.22416 0.90875 1.24753 0.98249 0.98004 0.99188 1.69659 1.22033 1.34497 1.31354 0.86214 0.77880 0.85211 0.77022 1.21443 1.21741 1.20605 1.24111 0.95150 0.87559 1.00316 1.48219 1.49457 1.30827 1.03713 1.16283 0.80261 0.83337 0.80918 1.90752 1.40827 1.28647 1.83438 1.19973 1.05840 1.03481 0.83161 1.22187 0.99404 0.96132 0.97694 1.19670 1.01812 0.98497 0.93053 1.98353 1.61427 1.46615 1.93681 1.20558 1.01917 0.97760 0.85428 1.98393 1.97643 1.95650 1.05793 1.43669 1.32611 1.25966 1.05174 1.22406 0.93196 0.91215 1.00829 0.92284 0.91708 0.91498 0.89898 0.90348 0.77776 0.93302 0.89612 0.90417 0.79862 0.89869 0.89718 0.86908 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -2.01 9.06 37.16 0.34 -1.67 16 2 C 0.14 1.94 3.50 -66.95 -0.23 1.71 16 3 H 0.07 0.99 8.14 -51.93 -0.42 0.56 16 4 C -0.14 -1.97 6.11 -24.89 -0.15 -2.12 16 5 C 0.17 3.04 3.69 -65.78 -0.24 2.79 16 6 H 0.07 1.18 8.13 -51.93 -0.42 0.76 16 7 N -0.71 -15.92 5.28 -51.35 -0.27 -16.19 16 8 C -0.25 -6.38 9.98 -15.06 -0.15 -6.53 16 9 H 0.07 1.81 7.83 -52.49 -0.41 1.40 16 10 C -0.01 -0.14 5.50 -17.43 -0.10 -0.23 16 11 N -0.93 -26.38 13.06 55.49 0.72 -25.66 16 12 Si 0.91 21.30 29.55 -169.99 -5.02 16.28 16 13 H -0.29 -6.77 7.11 56.52 0.40 -6.37 16 14 H -0.29 -6.96 7.11 56.52 0.40 -6.56 16 15 H -0.28 -6.43 7.11 56.52 0.40 -6.03 16 16 C 0.05 0.85 4.93 -2.54 -0.01 0.84 16 17 N -0.59 -8.72 3.08 -164.59 -0.51 -9.23 16 18 C 0.60 9.20 7.57 -12.91 -0.10 9.10 16 19 O -0.56 -9.06 13.62 5.18 0.07 -8.99 16 20 C -0.01 -0.15 6.84 -81.93 -0.56 -0.71 16 21 C -0.13 -1.85 9.15 -39.11 -0.36 -2.21 16 22 C -0.10 -1.32 6.66 -39.90 -0.27 -1.59 16 23 Cl -0.03 -0.39 29.12 -51.86 -1.51 -1.90 16 24 C 0.09 1.10 7.39 -16.76 -0.12 0.98 16 25 Cl 0.00 -0.03 28.59 -51.86 -1.48 -1.52 16 26 N -0.40 -5.05 3.17 -116.64 -0.37 -5.42 16 27 C 0.06 0.62 10.41 59.85 0.62 1.24 16 28 H 0.06 0.75 8.14 -51.93 -0.42 0.33 16 29 H 0.06 0.68 8.14 -51.93 -0.42 0.26 16 30 H 0.07 0.90 6.76 -51.93 -0.35 0.55 16 31 H 0.08 1.10 7.83 -51.93 -0.41 0.70 16 32 H 0.08 1.14 7.99 -51.93 -0.42 0.73 16 33 H 0.39 9.29 7.71 -40.82 -0.31 8.97 16 34 H 0.26 7.14 8.31 -40.82 -0.34 6.80 16 35 H 0.09 1.36 5.30 -51.93 -0.28 1.08 16 36 H 0.08 1.30 8.01 -51.93 -0.42 0.88 16 37 H 0.18 2.68 4.70 -52.49 -0.25 2.43 16 38 H 0.08 0.72 8.14 -51.93 -0.42 0.30 16 39 H 0.08 0.64 7.89 -51.93 -0.41 0.23 16 40 H 0.11 1.21 6.28 -51.92 -0.33 0.88 16 LS Contribution 356.89 15.07 5.38 5.38 Total: -1.00 -28.61 356.89 -9.14 -37.76 By element: Atomic # 1 Polarization: 12.71 SS G_CDS: -4.82 Total: 7.89 kcal Atomic # 6 Polarization: 2.94 SS G_CDS: -1.33 Total: 1.60 kcal Atomic # 7 Polarization: -56.08 SS G_CDS: -0.42 Total: -56.50 kcal Atomic # 8 Polarization: -9.06 SS G_CDS: 0.07 Total: -8.99 kcal Atomic # 14 Polarization: 21.30 SS G_CDS: -5.02 Total: 16.28 kcal Atomic # 17 Polarization: -0.43 SS G_CDS: -2.99 Total: -3.42 kcal Total LS contribution 5.38 Total: 5.38 kcal Total: -28.61 -9.14 -37.76 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000988926195.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 69.324 kcal (2) G-P(sol) polarization free energy of solvation -28.611 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 40.713 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.144 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.755 kcal (6) G-S(sol) free energy of system = (1) + (5) 31.569 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds