Wall clock time and date at job start Wed Apr 1 2020 03:00:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.42900 * 113.99429 * 2 1 4 4 C 1.53006 * 109.46785 * 179.97438 * 3 2 1 5 5 N 1.46504 * 109.46716 * 65.00221 * 4 3 2 6 6 C 1.37095 * 119.99983 * 264.46473 * 5 4 3 7 7 H 1.07994 * 119.99962 * 138.26763 * 6 5 4 8 8 C 1.38949 * 120.00325 * 318.27681 * 6 5 4 9 9 N 1.31416 * 119.99893 * 341.87682 * 8 6 5 10 10 Si 1.86797 * 120.00522 * 161.88437 * 8 6 5 11 11 H 1.48507 * 109.46855 * 359.97438 * 10 8 6 12 12 H 1.48500 * 109.47395 * 119.99482 * 10 8 6 13 13 H 1.48502 * 109.47162 * 239.99820 * 10 8 6 14 14 C 1.34773 * 119.99979 * 84.47128 * 5 4 3 15 15 O 1.21289 * 120.00018 * 359.97438 * 14 5 4 16 16 C 1.50698 * 120.00176 * 179.97438 * 14 5 4 17 17 C 1.52994 * 109.47352 * 179.97438 * 16 14 5 18 18 O 1.42907 * 109.47156 * 180.02562 * 17 16 14 19 19 C 1.35919 * 117.00192 * 180.02562 * 18 17 16 20 20 C 1.38750 * 120.02951 * 0.27266 * 19 18 17 21 21 C 1.38143 * 120.00697 * 180.25151 * 20 19 18 22 22 C 1.38339 * 120.06110 * 359.44956 * 21 20 19 23 23 Cl 1.73600 * 119.96564 * 180.27507 * 22 21 20 24 24 C 1.38563 * 120.06294 * 0.30070 * 22 21 20 25 25 F 1.35108 * 119.99950 * 180.02562 * 24 22 21 26 26 C 1.38366 * 119.99702 * 359.97431 * 24 22 21 27 27 H 1.09000 * 109.47162 * 299.99674 * 1 2 3 28 28 H 1.08995 * 109.47190 * 60.00389 * 1 2 3 29 29 H 1.09002 * 109.46962 * 179.97438 * 1 2 3 30 30 H 1.08998 * 109.47349 * 60.00119 * 3 2 1 31 31 H 1.08995 * 109.47234 * 300.00131 * 3 2 1 32 32 H 1.08995 * 109.47058 * 305.00380 * 4 3 2 33 33 H 1.09002 * 109.47003 * 184.99756 * 4 3 2 34 34 H 0.97000 * 120.00382 * 179.97438 * 9 8 6 35 35 H 1.09001 * 109.46904 * 59.99802 * 16 14 5 36 36 H 1.09003 * 109.46806 * 300.00125 * 16 14 5 37 37 H 1.09001 * 109.47249 * 60.00049 * 17 16 14 38 38 H 1.09003 * 109.47295 * 299.99860 * 17 16 14 39 39 H 1.08009 * 119.99774 * 359.97438 * 20 19 18 40 40 H 1.07999 * 119.97383 * 179.72683 * 21 20 19 41 41 H 1.08003 * 120.03413 * 179.97438 * 26 24 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0101 1.3055 0.0000 4 6 3.5354 1.1848 0.0006 5 7 3.9766 0.5641 -1.2510 6 6 4.2072 -0.7863 -1.3024 7 1 3.8794 -1.3579 -2.1580 8 6 4.8624 -1.4197 -0.2535 9 7 5.5677 -0.7145 0.6022 10 14 4.7411 -3.2737 -0.0599 11 1 3.8935 -3.8303 -1.1448 12 1 6.0992 -3.8694 -0.1372 13 1 4.1337 -3.5952 1.2566 14 6 4.1559 1.3208 -2.3517 15 8 3.9515 2.5154 -2.3063 16 6 4.6102 0.6825 -3.6390 17 6 4.7339 1.7542 -4.7239 18 8 5.1642 1.1488 -5.9448 19 6 5.3254 1.9686 -7.0168 20 6 5.0798 3.3287 -6.8940 21 6 5.2388 4.1607 -7.9852 22 6 5.6538 3.6410 -9.1983 23 17 5.8596 4.6900 -10.5661 24 6 5.9047 2.2840 -9.3227 25 9 6.3105 1.7779 -10.5078 26 6 5.7409 1.4474 -8.2328 27 1 -0.3633 0.5138 0.8900 28 1 -0.3633 0.5137 -0.8900 29 1 -0.3633 -1.0277 -0.0005 30 1 1.6885 1.8464 0.8900 31 1 1.6885 1.8464 -0.8899 32 1 3.8507 0.5686 0.8426 33 1 3.9784 2.1767 0.0902 34 1 6.0249 -1.1566 1.3346 35 1 3.8819 -0.0665 -3.9500 36 1 5.5787 0.2061 -3.4863 37 1 5.4620 2.5035 -4.4131 38 1 3.7652 2.2302 -4.8765 39 1 4.7600 3.7363 -5.9463 40 1 5.0433 5.2186 -7.8902 41 1 5.9359 0.3895 -8.3292 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000597754592.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Wed Apr 1 2020 03:00:04 Heat of formation + Delta-G solvation = -141.289253 kcal Electronic energy + Delta-G solvation = -27243.324657 eV Core-core repulsion = 22871.643593 eV Total energy + Delta-G solvation = -4371.681064 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 345.098 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -49.18120 -40.28076 -38.84190 -37.71460 -37.02578 -36.40398 -34.81043 -31.93085 -31.66542 -30.91351 -29.68525 -28.91643 -25.92016 -25.00830 -24.27501 -23.27675 -22.29938 -21.25558 -19.17097 -18.76916 -17.10904 -16.94598 -16.73361 -16.30590 -16.24194 -15.93933 -15.81651 -15.45039 -15.34513 -14.64505 -14.44818 -14.26925 -14.15015 -14.10553 -13.76372 -13.21240 -13.08575 -12.75152 -12.48741 -12.28152 -12.08723 -11.96563 -11.58886 -11.32859 -11.23522 -11.21685 -11.07135 -11.00963 -10.86936 -10.71525 -10.38083 -10.35634 -10.09577 -9.22098 -9.21152 -9.04253 -8.60276 -8.36855 -7.56076 -6.41014 -4.13161 0.78427 0.88145 1.84667 2.92765 3.12589 3.22328 3.24074 3.27999 3.76253 3.93537 4.12133 4.42179 4.44136 4.65912 4.74052 4.93731 5.00315 5.04470 5.32414 5.34106 5.44351 5.60172 5.62957 5.65737 5.67327 5.81053 5.89569 5.93474 5.98745 6.00619 6.20680 6.22372 6.32850 6.36025 6.47982 6.64061 7.15562 7.26147 7.42303 7.74915 7.92820 8.29834 9.03851 9.38128 9.81950 10.63133 Molecular weight = 345.10amu Principal moments of inertia in cm(-1) A = 0.016074 B = 0.002238 C = 0.002086 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1741.477729 B =12506.039057 C =13421.338874 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.031 3.969 2 O -0.366 6.366 3 C 0.051 3.949 4 C 0.121 3.879 5 N -0.422 5.422 6 C -0.330 4.330 7 H 0.088 0.912 8 C 0.051 3.949 9 N -0.863 5.863 10 Si 0.917 3.083 11 H -0.267 1.267 12 H -0.283 1.283 13 H -0.280 1.280 14 C 0.475 3.525 15 O -0.615 6.615 16 C -0.116 4.116 17 C 0.074 3.926 18 O -0.306 6.306 19 C 0.179 3.821 20 C -0.208 4.208 21 C -0.039 4.039 22 C -0.120 4.120 23 Cl -0.059 7.059 24 C 0.149 3.851 25 F -0.124 7.124 26 C -0.185 4.185 27 H 0.030 0.970 28 H 0.032 0.968 29 H 0.078 0.922 30 H 0.040 0.960 31 H 0.042 0.958 32 H 0.107 0.893 33 H 0.071 0.929 34 H 0.269 0.731 35 H 0.090 0.910 36 H 0.100 0.900 37 H 0.073 0.927 38 H 0.070 0.930 39 H 0.150 0.850 40 H 0.145 0.855 41 H 0.153 0.847 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.542 5.510 -11.966 13.417 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.284 6.284 3 C -0.026 4.026 4 C -0.003 4.003 5 N -0.139 5.139 6 C -0.458 4.458 7 H 0.105 0.895 8 C -0.155 4.155 9 N -0.499 5.499 10 Si 0.743 3.257 11 H -0.191 1.191 12 H -0.209 1.209 13 H -0.205 1.205 14 C 0.264 3.736 15 O -0.504 6.504 16 C -0.156 4.156 17 C 0.000 4.000 18 O -0.219 6.219 19 C 0.131 3.869 20 C -0.227 4.227 21 C -0.058 4.058 22 C -0.148 4.148 23 Cl -0.030 7.030 24 C 0.128 3.872 25 F -0.102 7.102 26 C -0.205 4.205 27 H 0.049 0.951 28 H 0.050 0.950 29 H 0.096 0.904 30 H 0.058 0.942 31 H 0.060 0.940 32 H 0.125 0.875 33 H 0.089 0.911 34 H 0.079 0.921 35 H 0.108 0.892 36 H 0.119 0.881 37 H 0.091 0.909 38 H 0.088 0.912 39 H 0.168 0.832 40 H 0.163 0.837 41 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges -2.354 5.723 -11.858 13.376 hybrid contribution -0.274 -0.610 0.052 0.671 sum -2.628 5.113 -11.806 13.131 Atomic orbital electron populations 1.22649 0.83321 1.01797 0.98873 1.88128 1.17466 1.27738 1.95057 1.23043 0.96469 0.84345 0.98777 1.21380 0.89145 0.98958 0.90821 1.43235 1.55872 1.07420 1.07397 1.19321 1.36886 0.81971 1.07573 0.89479 1.25359 0.93561 0.99995 0.96624 1.69927 1.27479 1.36739 1.15775 0.86049 0.77872 0.83041 0.78715 1.19141 1.20936 1.20536 1.20042 0.81188 0.86115 0.86282 1.90526 1.58275 1.15316 1.86239 1.21184 1.04871 0.97799 0.91778 1.22758 1.00138 0.96628 0.80525 1.86076 1.81194 1.36256 1.18341 1.18716 0.91710 0.89088 0.87355 1.21479 1.07694 0.92562 1.00918 1.20741 0.94919 1.00742 0.89418 1.20768 1.12622 0.89912 0.91496 1.98366 1.96196 1.65575 1.42897 1.16915 0.98786 0.89737 0.81721 1.91547 1.87595 1.87485 1.43614 1.20225 1.08730 1.01526 0.89973 0.95113 0.94975 0.90372 0.94216 0.93968 0.87523 0.91088 0.92079 0.89159 0.88144 0.90917 0.91173 0.83224 0.83698 0.82927 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.47 11.01 101.05 1.11 1.58 16 2 O -0.37 -7.43 10.44 -35.23 -0.37 -7.80 16 3 C 0.05 1.01 6.24 37.16 0.23 1.25 16 4 C 0.12 2.74 5.27 -4.04 -0.02 2.72 16 5 N -0.42 -10.05 2.45 -114.81 -0.28 -10.33 16 6 C -0.33 -8.02 8.29 -14.93 -0.12 -8.14 16 7 H 0.09 2.06 7.21 -52.49 -0.38 1.68 16 8 C 0.05 1.25 4.95 -17.47 -0.09 1.16 16 9 N -0.86 -22.15 11.66 55.50 0.65 -21.50 16 10 Si 0.92 19.39 29.59 -169.99 -5.03 14.36 16 11 H -0.27 -5.56 7.11 56.52 0.40 -5.16 16 12 H -0.28 -5.97 7.11 56.52 0.40 -5.57 16 13 H -0.28 -5.98 7.11 56.52 0.40 -5.58 16 14 C 0.47 10.64 7.59 -10.99 -0.08 10.55 16 15 O -0.62 -14.59 15.65 5.55 0.09 -14.50 16 16 C -0.12 -2.15 4.80 -27.89 -0.13 -2.28 16 17 C 0.07 1.16 4.03 37.15 0.15 1.31 16 18 O -0.31 -4.52 10.14 -19.49 -0.20 -4.71 16 19 C 0.18 2.32 6.68 -39.23 -0.26 2.06 16 20 C -0.21 -2.40 9.04 -39.43 -0.36 -2.76 16 21 C -0.04 -0.41 9.82 -39.58 -0.39 -0.80 16 22 C -0.12 -1.36 6.33 -39.42 -0.25 -1.61 16 23 Cl -0.06 -0.62 28.61 -51.86 -1.48 -2.11 16 24 C 0.15 1.77 7.27 -39.41 -0.29 1.48 16 25 F -0.12 -1.51 16.83 2.25 0.04 -1.47 16 26 C -0.18 -2.22 9.96 -39.38 -0.39 -2.61 16 27 H 0.03 0.41 8.14 -51.93 -0.42 -0.02 16 28 H 0.03 0.45 8.14 -51.93 -0.42 0.03 16 29 H 0.08 1.05 8.14 -51.93 -0.42 0.63 16 30 H 0.04 0.68 8.14 -51.93 -0.42 0.26 16 31 H 0.04 0.85 8.14 -51.93 -0.42 0.43 16 32 H 0.11 2.62 5.81 -51.93 -0.30 2.32 16 33 H 0.07 1.61 7.59 -51.93 -0.39 1.22 16 34 H 0.27 6.54 8.31 -40.82 -0.34 6.20 16 35 H 0.09 1.60 7.70 -51.93 -0.40 1.20 16 36 H 0.10 1.89 8.10 -51.93 -0.42 1.47 16 37 H 0.07 1.14 7.60 -51.93 -0.39 0.74 16 38 H 0.07 1.07 7.63 -51.93 -0.40 0.67 16 39 H 0.15 1.65 6.30 -52.48 -0.33 1.32 16 40 H 0.15 1.17 8.06 -52.49 -0.42 0.74 16 41 H 0.15 1.64 8.06 -52.48 -0.42 1.21 16 LS Contribution 371.06 15.07 5.59 5.59 Total: -1.00 -27.75 371.06 -7.00 -34.75 By element: Atomic # 1 Polarization: 8.91 SS G_CDS: -5.11 Total: 3.80 kcal Atomic # 6 Polarization: 4.81 SS G_CDS: -0.89 Total: 3.92 kcal Atomic # 7 Polarization: -32.19 SS G_CDS: 0.37 Total: -31.83 kcal Atomic # 8 Polarization: -26.54 SS G_CDS: -0.48 Total: -27.02 kcal Atomic # 9 Polarization: -1.51 SS G_CDS: 0.04 Total: -1.47 kcal Atomic # 14 Polarization: 19.39 SS G_CDS: -5.03 Total: 14.36 kcal Atomic # 17 Polarization: -0.62 SS G_CDS: -1.48 Total: -2.11 kcal Total LS contribution 5.59 Total: 5.59 kcal Total: -27.75 -7.00 -34.75 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000597754592.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -106.540 kcal (2) G-P(sol) polarization free energy of solvation -27.751 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -134.291 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.998 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.750 kcal (6) G-S(sol) free energy of system = (1) + (5) -141.289 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds