Wall clock time and date at job start Wed Apr 1 2020 03:00:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45203 * 1 3 3 C 1.34221 * 117.00040 * 2 1 4 4 O 1.20819 * 120.00512 * 0.02562 * 3 2 1 5 5 C 1.50703 * 119.99912 * 180.02562 * 3 2 1 6 6 C 1.52997 * 109.47289 * 180.02562 * 5 3 2 7 7 N 1.46507 * 109.47439 * 180.02562 * 6 5 3 8 8 C 1.36934 * 119.99490 * 270.34337 * 7 6 5 9 9 H 1.07997 * 120.00414 * 325.88180 * 8 7 6 10 10 C 1.38815 * 119.99654 * 145.88666 * 8 7 6 11 11 N 1.31615 * 120.00115 * 337.16249 * 10 8 7 12 12 Si 1.86801 * 119.99872 * 157.17048 * 10 8 7 13 13 H 1.48502 * 109.47160 * 59.99826 * 12 10 8 14 14 H 1.48504 * 109.46816 * 179.97438 * 12 10 8 15 15 H 1.48496 * 109.47093 * 299.99644 * 12 10 8 16 16 C 1.46498 * 120.00130 * 90.33882 * 7 6 5 17 17 C 1.53001 * 109.46819 * 90.00338 * 16 7 6 18 18 O 1.42900 * 109.47382 * 65.00073 * 17 16 7 19 19 C 1.35942 * 117.00373 * 180.02562 * 18 17 16 20 20 C 1.38732 * 120.02353 * 0.25014 * 19 18 17 21 21 C 1.38145 * 119.98911 * 180.23481 * 20 19 18 22 22 C 1.38439 * 120.04882 * 359.49169 * 21 20 19 23 23 F 1.35095 * 119.98074 * 180.25880 * 22 21 20 24 24 C 1.38546 * 120.04549 * 0.27743 * 22 21 20 25 25 Cl 1.73604 * 119.99878 * 180.02562 * 24 22 21 26 26 C 1.38276 * 120.00961 * 359.97438 * 24 22 21 27 27 H 1.08994 * 109.46865 * 299.99931 * 1 2 3 28 28 H 1.09003 * 109.46665 * 60.00055 * 1 2 3 29 29 H 1.08996 * 109.47099 * 179.97438 * 1 2 3 30 30 H 1.09003 * 109.47053 * 59.99747 * 5 3 2 31 31 H 1.09001 * 109.47134 * 299.99996 * 5 3 2 32 32 H 1.08991 * 109.47541 * 59.99460 * 6 5 3 33 33 H 1.09003 * 109.46834 * 299.99431 * 6 5 3 34 34 H 0.97004 * 120.00345 * 179.97438 * 11 10 8 35 35 H 1.09000 * 109.47174 * 330.00509 * 16 7 6 36 36 H 1.08998 * 109.47261 * 210.00273 * 16 7 6 37 37 H 1.09005 * 109.47438 * 304.99973 * 17 16 7 38 38 H 1.08999 * 109.46942 * 184.99843 * 17 16 7 39 39 H 1.07999 * 120.00195 * 0.02562 * 20 19 18 40 40 H 1.08000 * 119.97804 * 179.76921 * 21 20 19 41 41 H 1.07994 * 120.02479 * 179.97438 * 26 24 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4035 2.2093 0.0005 5 6 3.5664 1.2748 -0.0006 6 6 4.0002 2.7419 0.0002 7 7 5.4633 2.8186 -0.0010 8 6 6.1483 2.8464 1.1844 9 1 5.7218 3.3435 2.0430 10 6 7.3910 2.2357 1.2822 11 7 7.7210 1.2769 0.4432 12 14 8.5949 2.7745 2.6051 13 1 7.9860 2.5656 3.9433 14 1 9.8401 1.9724 2.4975 15 1 8.9154 4.2134 2.4262 16 6 6.1933 2.8654 -1.2703 17 6 6.3720 4.3222 -1.7023 18 8 7.2069 4.9994 -0.7608 19 6 7.4669 6.3123 -0.9988 20 6 6.9249 6.9364 -2.1129 21 6 7.1935 8.2694 -2.3567 22 6 7.9948 8.9859 -1.4843 23 9 8.2523 10.2907 -1.7212 24 6 8.5331 8.3656 -0.3685 25 17 9.5373 9.2654 0.7250 26 6 8.2699 7.0301 -0.1252 27 1 -0.3633 0.5138 0.8900 28 1 -0.3633 0.5139 -0.8900 29 1 -0.3633 -1.0276 -0.0005 30 1 3.9557 0.7808 -0.8908 31 1 3.9564 0.7805 0.8892 32 1 3.6109 3.2355 0.8905 33 1 3.6102 3.2366 -0.8894 34 1 8.5896 0.8504 0.5113 35 1 5.6310 2.3266 -2.0329 36 1 7.1714 2.4012 -1.1442 37 1 5.3987 4.8114 -1.7424 38 1 6.8358 4.3545 -2.6882 39 1 6.2957 6.3794 -2.7913 40 1 6.7745 8.7541 -3.2261 41 1 8.6897 6.5463 0.7442 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000931536362.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Wed Apr 1 2020 03:00:57 Heat of formation + Delta-G solvation = -127.221236 kcal Electronic energy + Delta-G solvation = -27557.321223 eV Core-core repulsion = 23186.250194 eV Total energy + Delta-G solvation = -4371.071029 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 345.098 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -48.81080 -40.09466 -39.84073 -37.47333 -36.54724 -36.23943 -35.55648 -32.09239 -31.26534 -30.64986 -29.30838 -28.25997 -27.28372 -24.59468 -23.80262 -22.78483 -21.97391 -20.78077 -19.72839 -18.23719 -17.35401 -17.24793 -16.94647 -16.52960 -16.23658 -16.15342 -15.73400 -15.19792 -15.08612 -14.75175 -14.11941 -13.98819 -13.85603 -13.71998 -13.34959 -13.25189 -12.86374 -12.77898 -12.55532 -12.24441 -12.14938 -11.82637 -11.69212 -11.35042 -11.19754 -11.10914 -10.88982 -10.80256 -10.62450 -10.56995 -10.38667 -10.18819 -9.99464 -9.95154 -9.92327 -8.97637 -8.57299 -7.92019 -6.80395 -5.88867 -3.42323 0.99225 1.22640 1.95301 2.58610 3.05753 3.37368 3.43097 3.47847 3.51842 3.69805 4.18970 4.44789 4.62618 4.95835 5.08895 5.16980 5.22703 5.23789 5.26568 5.27879 5.38788 5.57809 5.64469 5.71115 5.77233 5.86356 5.95806 5.98517 6.05379 6.17491 6.27662 6.35602 6.41166 6.57878 6.62918 6.68203 6.88327 7.44266 7.75395 7.82842 8.09799 8.39220 9.05329 9.69552 10.21742 11.13031 Molecular weight = 345.10amu Principal moments of inertia in cm(-1) A = 0.011599 B = 0.002945 C = 0.002528 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2413.442595 B = 9505.761189 C =11074.632060 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.366 6.366 3 C 0.462 3.538 4 O -0.519 6.519 5 C -0.131 4.131 6 C 0.159 3.841 7 N -0.573 5.573 8 C -0.251 4.251 9 H 0.063 0.937 10 C 0.021 3.979 11 N -0.890 5.890 12 Si 0.896 3.104 13 H -0.283 1.283 14 H -0.292 1.292 15 H -0.279 1.279 16 C 0.135 3.865 17 C 0.040 3.960 18 O -0.263 6.263 19 C 0.154 3.846 20 C -0.188 4.188 21 C -0.099 4.099 22 C 0.048 3.952 23 F -0.136 7.136 24 C -0.030 4.030 25 Cl -0.053 7.053 26 C -0.126 4.126 27 H 0.059 0.941 28 H 0.058 0.942 29 H 0.095 0.905 30 H 0.096 0.904 31 H 0.108 0.892 32 H 0.055 0.945 33 H 0.043 0.957 34 H 0.256 0.744 35 H 0.052 0.948 36 H 0.115 0.885 37 H 0.048 0.952 38 H 0.047 0.953 39 H 0.142 0.858 40 H 0.142 0.858 41 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.179 5.777 -6.156 9.420 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.283 6.283 3 C 0.306 3.694 4 O -0.408 6.408 5 C -0.171 4.171 6 C 0.032 3.968 7 N -0.292 5.292 8 C -0.380 4.380 9 H 0.080 0.920 10 C -0.179 4.179 11 N -0.532 5.532 12 Si 0.725 3.275 13 H -0.209 1.209 14 H -0.218 1.218 15 H -0.205 1.205 16 C 0.008 3.992 17 C -0.037 4.037 18 O -0.173 6.173 19 C 0.105 3.895 20 C -0.207 4.207 21 C -0.118 4.118 22 C 0.028 3.972 23 F -0.115 7.115 24 C -0.058 4.058 25 Cl -0.024 7.024 26 C -0.146 4.146 27 H 0.077 0.923 28 H 0.077 0.923 29 H 0.113 0.887 30 H 0.114 0.886 31 H 0.126 0.874 32 H 0.073 0.927 33 H 0.062 0.938 34 H 0.066 0.934 35 H 0.070 0.930 36 H 0.132 0.868 37 H 0.067 0.933 38 H 0.065 0.935 39 H 0.160 0.840 40 H 0.160 0.840 41 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges -4.087 5.948 -5.898 9.321 hybrid contribution 0.405 0.569 0.483 0.849 sum -3.682 6.517 -5.415 9.239 Atomic orbital electron populations 1.23155 0.77693 1.03024 1.02120 1.86600 1.22541 1.34744 1.84379 1.24703 0.92971 0.80700 0.71073 1.90604 1.67621 1.36411 1.46138 1.22473 0.83965 1.04870 1.05839 1.20827 0.85621 0.90240 1.00117 1.43880 0.99267 1.83448 1.02587 1.18935 1.00468 1.28544 0.90092 0.91964 1.24976 0.99965 0.95040 0.97959 1.69898 1.21788 1.22206 1.39347 0.86485 0.80659 0.78808 0.81523 1.20937 1.21752 1.20485 1.21199 1.01959 0.89085 0.86916 1.24013 0.91805 0.97692 0.90210 1.86534 1.64540 1.16882 1.49367 1.19132 0.92264 0.86100 0.92002 1.21275 1.04713 0.95227 0.99460 1.20819 0.97730 0.94192 0.99080 1.17138 1.03723 0.79478 0.96835 1.91485 1.93003 1.32682 1.94297 1.20595 0.99104 0.93047 0.93049 1.98374 1.67243 1.74321 1.62443 1.20207 1.01494 0.91056 1.01807 0.92264 0.92346 0.88695 0.88590 0.87350 0.92658 0.93844 0.93373 0.92989 0.86807 0.93337 0.93519 0.84004 0.84039 0.83165 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.38 10.56 101.05 1.07 1.45 16 2 O -0.37 -5.50 10.56 -39.24 -0.41 -5.92 16 3 C 0.46 7.77 7.96 36.01 0.29 8.06 16 4 O -0.52 -9.72 15.73 -18.74 -0.29 -10.01 16 5 C -0.13 -2.30 6.14 -27.88 -0.17 -2.47 16 6 C 0.16 3.06 4.96 -4.04 -0.02 3.04 16 7 N -0.57 -12.51 2.43 -173.24 -0.42 -12.93 16 8 C -0.25 -6.23 8.99 -15.06 -0.14 -6.36 16 9 H 0.06 1.59 7.93 -52.49 -0.42 1.18 16 10 C 0.02 0.52 4.95 -17.43 -0.09 0.44 16 11 N -0.89 -23.26 11.31 55.49 0.63 -22.63 16 12 Si 0.90 20.77 29.61 -169.99 -5.03 15.74 16 13 H -0.28 -6.57 7.11 56.52 0.40 -6.17 16 14 H -0.29 -6.84 7.11 56.52 0.40 -6.44 16 15 H -0.28 -6.45 7.11 56.52 0.40 -6.05 16 16 C 0.14 2.70 5.72 -4.04 -0.02 2.68 16 17 C 0.04 0.69 5.08 37.16 0.19 0.88 16 18 O -0.26 -5.09 9.61 -19.56 -0.19 -5.28 16 19 C 0.15 2.55 6.68 -39.24 -0.26 2.29 16 20 C -0.19 -2.55 9.04 -39.43 -0.36 -2.91 16 21 C -0.10 -1.24 10.02 -39.54 -0.40 -1.64 16 22 C 0.05 0.68 7.27 -39.39 -0.29 0.40 16 23 F -0.14 -1.92 16.83 2.25 0.04 -1.88 16 24 C -0.03 -0.45 6.32 -39.45 -0.25 -0.70 16 25 Cl -0.05 -0.74 28.61 -51.86 -1.48 -2.22 16 26 C -0.13 -2.06 9.77 -39.41 -0.38 -2.45 16 27 H 0.06 0.65 8.13 -51.93 -0.42 0.23 16 28 H 0.06 0.62 8.13 -51.93 -0.42 0.20 16 29 H 0.09 0.76 8.14 -51.93 -0.42 0.34 16 30 H 0.10 1.63 8.14 -51.93 -0.42 1.21 16 31 H 0.11 2.05 8.14 -51.93 -0.42 1.63 16 32 H 0.06 1.12 8.00 -51.93 -0.42 0.71 16 33 H 0.04 0.78 8.03 -51.93 -0.42 0.37 16 34 H 0.26 6.61 8.31 -40.82 -0.34 6.27 16 35 H 0.05 0.93 8.07 -51.93 -0.42 0.51 16 36 H 0.11 2.66 5.32 -51.93 -0.28 2.38 16 37 H 0.05 0.78 7.65 -51.93 -0.40 0.38 16 38 H 0.05 0.67 7.67 -51.93 -0.40 0.27 16 39 H 0.14 1.66 6.30 -52.49 -0.33 1.33 16 40 H 0.14 1.36 8.06 -52.49 -0.42 0.94 16 41 H 0.15 2.55 8.06 -52.49 -0.42 2.13 16 LS Contribution 373.56 15.07 5.63 5.63 Total: -1.00 -27.87 373.56 -7.53 -35.41 By element: Atomic # 1 Polarization: 6.56 SS G_CDS: -5.16 Total: 1.40 kcal Atomic # 6 Polarization: 3.53 SS G_CDS: -0.83 Total: 2.70 kcal Atomic # 7 Polarization: -35.77 SS G_CDS: 0.21 Total: -35.56 kcal Atomic # 8 Polarization: -20.31 SS G_CDS: -0.90 Total: -21.21 kcal Atomic # 9 Polarization: -1.92 SS G_CDS: 0.04 Total: -1.88 kcal Atomic # 14 Polarization: 20.77 SS G_CDS: -5.03 Total: 15.74 kcal Atomic # 17 Polarization: -0.74 SS G_CDS: -1.48 Total: -2.22 kcal Total LS contribution 5.63 Total: 5.63 kcal Total: -27.87 -7.53 -35.41 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000931536362.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -91.815 kcal (2) G-P(sol) polarization free energy of solvation -27.873 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -119.688 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.533 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.407 kcal (6) G-S(sol) free energy of system = (1) + (5) -127.221 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds