Wall clock time and date at job start Wed Apr 1 2020 03:05:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17398 * 1 3 3 C 1.47202 * 179.97438 * 2 1 4 4 N 1.46898 * 109.47468 * 302.19487 * 3 2 1 5 5 C 1.46894 * 111.00228 * 66.04149 * 4 3 2 6 6 C 1.47202 * 109.47552 * 199.52262 * 5 4 3 7 7 N 5.04339 * 110.14014 * 313.18009 * 2 1 3 8 8 C 1.46904 * 111.00333 * 190.00187 * 4 3 2 9 9 C 1.50697 * 109.46976 * 75.97163 * 8 4 3 10 10 O 1.21290 * 120.00502 * 5.21862 * 9 8 4 11 11 N 1.34780 * 119.99991 * 185.21793 * 9 8 4 12 12 C 1.46497 * 120.00242 * 184.37605 * 11 9 8 13 13 C 1.50700 * 109.47136 * 269.99681 * 12 11 9 14 14 H 1.08001 * 119.99994 * 0.02562 * 13 12 11 15 15 C 1.37878 * 120.00051 * 179.97438 * 13 12 11 16 16 N 1.31517 * 119.99771 * 0.02562 * 15 13 12 17 17 Si 1.86791 * 120.00122 * 180.02562 * 15 13 12 18 18 H 1.48506 * 109.47312 * 0.02562 * 17 15 13 19 19 H 1.48501 * 109.47403 * 120.00084 * 17 15 13 20 20 H 1.48500 * 109.47231 * 240.00375 * 17 15 13 21 21 C 1.39929 * 119.99418 * 4.37542 * 11 9 8 22 22 C 1.38899 * 120.06705 * 67.96719 * 21 11 9 23 23 C 1.38095 * 119.95760 * 179.97438 * 22 21 11 24 24 C 1.38287 * 120.08117 * 0.06475 * 23 22 21 25 25 C 1.38375 * 120.12699 * 359.95360 * 24 23 22 26 26 Cl 1.73605 * 119.97689 * 180.02562 * 25 24 23 27 27 C 1.38246 * 120.04970 * 0.02562 * 25 24 23 28 28 H 4.40890 * 5.52176 * 179.97438 * 4 1 2 29 29 H 1.08999 * 109.47182 * 182.19069 * 3 2 1 30 30 H 1.09010 * 109.47111 * 62.19441 * 3 2 1 31 31 H 1.09000 * 109.47372 * 319.53134 * 5 4 3 32 32 H 1.09000 * 109.46922 * 79.52370 * 5 4 3 33 33 H 1.08999 * 109.46512 * 315.97477 * 8 4 3 34 34 H 1.08997 * 109.46999 * 195.97744 * 8 4 3 35 35 H 1.08998 * 109.46957 * 30.00284 * 12 11 9 36 36 H 1.09004 * 109.47155 * 149.99724 * 12 11 9 37 37 H 0.97001 * 119.99860 * 179.97438 * 16 15 13 38 38 H 1.08001 * 120.01878 * 0.03732 * 22 21 11 39 39 H 1.07993 * 119.95719 * 180.02562 * 23 22 21 40 40 H 1.07997 * 119.93393 * 179.97438 * 24 23 22 41 41 H 1.07999 * 120.04625 * 179.74712 * 27 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 7 3.1361 -0.7370 1.1720 5 6 2.7872 -2.1611 1.0814 6 6 2.8577 -2.7697 2.4199 7 7 2.9105 -3.2401 3.4528 8 6 4.5849 -0.5594 1.3379 9 6 4.8613 0.8087 1.9061 10 8 3.9406 1.5253 2.2373 11 7 6.1319 1.2361 2.0462 12 6 6.4048 2.5252 2.6863 13 6 6.4212 3.6113 1.6416 14 1 6.2455 3.3658 0.6047 15 6 6.6595 4.9184 2.0098 16 7 6.8730 5.2174 3.2726 17 14 6.6792 6.2647 0.7151 18 1 6.4129 5.6715 -0.6200 19 1 5.6304 7.2682 1.0284 20 1 8.0094 6.9248 0.7075 21 6 7.1903 0.4482 1.5802 22 6 7.3622 0.2498 0.2163 23 6 8.4078 -0.5276 -0.2411 24 6 9.2832 -1.1100 0.6572 25 6 9.1149 -0.9149 2.0167 26 17 10.2165 -1.6473 3.1410 27 6 8.0702 -0.1373 2.4805 28 1 -1.0499 0.0000 0.0003 29 1 3.0089 1.0277 0.0393 30 1 3.0096 -0.4786 -0.9091 31 1 1.7756 -2.2631 0.6887 32 1 3.4878 -2.6651 0.4157 33 1 5.0760 -0.6568 0.3698 34 1 4.9685 -1.3197 2.0182 35 1 5.6273 2.7384 3.4199 36 1 7.3735 2.4857 3.1846 37 1 7.0410 6.1370 3.5316 38 1 6.6791 0.7042 -0.4861 39 1 8.5417 -0.6815 -1.3016 40 1 10.0998 -1.7179 0.2969 41 1 7.9366 0.0116 3.5418 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000281375392.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Wed Apr 1 2020 03:05:25 Heat of formation + Delta-G solvation = 94.565879 kcal Electronic energy + Delta-G solvation = -27167.043107 eV Core-core repulsion = 23268.651465 eV Total energy + Delta-G solvation = -3898.391642 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 345.098 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -40.28163 -38.85786 -37.70914 -36.46383 -36.05124 -34.84208 -33.06858 -32.72376 -30.79168 -29.73997 -29.31064 -28.49407 -26.86866 -24.04288 -22.99723 -22.53636 -22.10143 -19.29679 -18.40127 -18.05355 -17.46087 -16.65677 -16.34161 -16.03425 -15.78604 -15.36481 -15.20970 -14.71375 -14.47159 -14.18820 -14.02138 -13.96865 -13.67004 -13.36415 -13.18136 -12.96067 -12.63756 -12.54361 -12.35306 -12.02979 -11.81402 -11.77016 -11.46286 -11.45970 -11.32412 -11.01523 -10.87718 -10.71655 -10.52535 -10.24722 -10.19210 -9.80767 -9.47150 -8.92632 -8.78336 -8.50975 -8.50381 -7.84563 -6.11716 -4.16698 1.17362 1.28758 2.12889 2.27866 2.69447 2.84370 2.86350 3.12849 3.25930 3.33471 3.35450 3.48018 3.65542 3.78908 4.06474 4.34229 4.39141 4.70861 4.83998 4.88046 4.95676 5.06048 5.10828 5.20930 5.23904 5.26411 5.31526 5.42898 5.53632 5.63171 5.82072 5.94012 6.19949 6.31854 6.45495 6.50496 6.56204 6.69087 6.98802 7.25162 7.34732 7.47766 7.60102 7.82707 8.10161 8.18157 8.74922 8.89075 9.48114 10.96821 Molecular weight = 345.10amu Principal moments of inertia in cm(-1) A = 0.006188 B = 0.005131 C = 0.003223 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 4523.823447 B = 5455.957130 C = 8686.583979 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.196 4.196 2 C -0.174 4.174 3 C 0.167 3.833 4 N -0.516 5.516 5 C 0.147 3.853 6 C 0.213 3.787 7 N -0.423 5.423 8 C 0.031 3.969 9 C 0.513 3.487 10 O -0.495 6.495 11 N -0.564 5.564 12 C 0.249 3.751 13 C -0.525 4.525 14 H 0.059 0.941 15 C 0.063 3.937 16 N -0.892 5.892 17 Si 0.899 3.101 18 H -0.273 1.273 19 H -0.282 1.282 20 H -0.283 1.283 21 C 0.178 3.822 22 C -0.122 4.122 23 C -0.096 4.096 24 C -0.124 4.124 25 C -0.021 4.021 26 Cl -0.076 7.076 27 C -0.117 4.117 28 H 0.216 0.784 29 H 0.115 0.885 30 H 0.065 0.935 31 H 0.121 0.879 32 H 0.088 0.912 33 H 0.076 0.924 34 H 0.101 0.899 35 H 0.049 0.951 36 H 0.035 0.965 37 H 0.264 0.736 38 H 0.131 0.869 39 H 0.133 0.867 40 H 0.131 0.869 41 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.843 -16.351 -10.677 19.547 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.215 4.215 2 C -0.175 4.175 3 C 0.041 3.959 4 N -0.241 5.241 5 C 0.017 3.983 6 C -0.106 4.106 7 N -0.101 5.101 8 C -0.100 4.100 9 C 0.299 3.701 10 O -0.368 6.368 11 N -0.293 5.293 12 C 0.132 3.868 13 C -0.564 4.564 14 H 0.077 0.923 15 C -0.139 4.139 16 N -0.531 5.531 17 Si 0.726 3.274 18 H -0.198 1.198 19 H -0.208 1.208 20 H -0.209 1.209 21 C 0.085 3.915 22 C -0.142 4.142 23 C -0.115 4.115 24 C -0.143 4.143 25 C -0.048 4.048 26 Cl -0.047 7.047 27 C -0.138 4.138 28 H 0.233 0.767 29 H 0.133 0.867 30 H 0.083 0.917 31 H 0.139 0.861 32 H 0.105 0.895 33 H 0.093 0.907 34 H 0.120 0.880 35 H 0.067 0.933 36 H 0.053 0.947 37 H 0.074 0.926 38 H 0.149 0.851 39 H 0.151 0.849 40 H 0.149 0.851 41 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges -1.393 -16.322 -8.274 18.352 hybrid contribution 0.514 0.831 -1.488 1.780 sum -0.879 -15.491 -9.761 18.331 Atomic orbital electron populations 1.24841 0.95819 1.00748 1.00043 1.22654 0.93940 1.00439 1.00461 1.19108 0.85496 1.01083 0.90201 1.61247 1.13636 1.07461 1.41729 1.19565 1.04645 0.87767 0.86313 1.28925 0.93368 0.93444 0.94859 1.81216 1.08477 1.09492 1.10887 1.22240 0.87578 0.97977 1.02192 1.20084 0.82643 0.87577 0.79829 1.90741 1.42496 1.56155 1.47381 1.46030 1.03008 1.20986 1.59323 1.19473 0.97612 0.76163 0.93570 1.21338 1.49209 0.91829 0.94039 0.92278 1.24912 0.94980 0.98541 0.95506 1.69935 1.48103 1.19449 1.15603 0.86433 0.77616 0.81766 0.81551 1.19762 1.20826 1.20942 1.17573 0.90436 0.92036 0.91470 1.21490 0.99021 0.99012 0.94704 1.20930 0.94132 0.96865 0.99553 1.20975 1.00654 1.01849 0.90840 1.20698 0.93783 0.99702 0.90594 1.98363 1.62497 1.81753 1.62070 1.21242 0.94673 0.96803 1.01038 0.76667 0.86690 0.91680 0.86086 0.89475 0.90660 0.88044 0.93329 0.94661 0.92638 0.85100 0.84921 0.85142 0.84604 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.20 -2.04 19.25 29.55 0.57 -1.47 16 2 C -0.17 -2.05 12.23 -37.12 -0.45 -2.51 16 3 C 0.17 1.88 5.10 -6.61 -0.03 1.85 16 4 N -0.52 -6.30 3.91 -243.11 -0.95 -7.25 16 5 C 0.15 1.27 5.32 -6.61 -0.04 1.23 16 6 C 0.21 2.58 14.86 -20.75 -0.31 2.28 16 7 N -0.42 -6.41 18.54 42.16 0.78 -5.62 16 8 C 0.03 0.40 4.19 -4.98 -0.02 0.38 16 9 C 0.51 9.61 7.11 -10.99 -0.08 9.53 16 10 O -0.50 -11.46 15.13 5.55 0.08 -11.38 16 11 N -0.56 -11.06 2.50 -114.74 -0.29 -11.34 16 12 C 0.25 6.19 5.08 -5.20 -0.03 6.17 16 13 C -0.53 -14.13 9.39 -34.44 -0.32 -14.45 16 14 H 0.06 1.56 7.81 -52.49 -0.41 1.15 16 15 C 0.06 1.74 5.46 -17.82 -0.10 1.65 16 16 N -0.89 -25.89 13.29 55.43 0.74 -25.15 16 17 Si 0.90 21.21 29.54 -169.99 -5.02 16.19 16 18 H -0.27 -6.28 7.11 56.52 0.40 -5.87 16 19 H -0.28 -6.70 7.11 56.52 0.40 -6.29 16 20 H -0.28 -6.59 7.11 56.52 0.40 -6.19 16 21 C 0.18 2.85 4.45 -83.70 -0.37 2.48 16 22 C -0.12 -1.61 8.25 -39.39 -0.32 -1.93 16 23 C -0.10 -1.01 10.04 -39.62 -0.40 -1.41 16 24 C -0.12 -1.36 9.83 -39.51 -0.39 -1.75 16 25 C -0.02 -0.27 6.32 -39.53 -0.25 -0.52 16 26 Cl -0.08 -0.93 28.95 -51.86 -1.50 -2.43 16 27 C -0.12 -1.78 9.47 -39.36 -0.37 -2.15 16 28 H 0.22 1.49 7.80 -54.10 -0.42 1.07 16 29 H 0.12 1.62 6.90 -51.93 -0.36 1.26 16 30 H 0.07 0.50 8.12 -51.92 -0.42 0.08 16 31 H 0.12 0.85 6.85 -51.93 -0.36 0.49 16 32 H 0.09 0.45 8.00 -51.93 -0.42 0.03 16 33 H 0.08 0.76 6.34 -51.93 -0.33 0.43 16 34 H 0.10 1.26 7.28 -51.93 -0.38 0.88 16 35 H 0.05 1.37 7.49 -51.93 -0.39 0.98 16 36 H 0.04 0.91 7.86 -51.93 -0.41 0.50 16 37 H 0.26 7.24 8.31 -40.82 -0.34 6.90 16 38 H 0.13 1.62 7.96 -52.49 -0.42 1.21 16 39 H 0.13 0.99 8.06 -52.49 -0.42 0.57 16 40 H 0.13 1.13 8.06 -52.49 -0.42 0.71 16 41 H 0.14 2.14 8.06 -52.49 -0.42 1.72 16 LS Contribution 384.42 15.07 5.79 5.79 Total: -1.00 -34.20 384.42 -7.99 -42.19 By element: Atomic # 1 Polarization: 4.34 SS G_CDS: -4.71 Total: -0.36 kcal Atomic # 6 Polarization: 2.29 SS G_CDS: -2.91 Total: -0.63 kcal Atomic # 7 Polarization: -49.65 SS G_CDS: 0.28 Total: -49.38 kcal Atomic # 8 Polarization: -11.46 SS G_CDS: 0.08 Total: -11.38 kcal Atomic # 14 Polarization: 21.21 SS G_CDS: -5.02 Total: 16.19 kcal Atomic # 17 Polarization: -0.93 SS G_CDS: -1.50 Total: -2.43 kcal Total LS contribution 5.79 Total: 5.79 kcal Total: -34.20 -7.99 -42.19 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000281375392.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 136.754 kcal (2) G-P(sol) polarization free energy of solvation -34.200 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 102.554 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.988 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.189 kcal (6) G-S(sol) free energy of system = (1) + (5) 94.566 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.72 seconds