Wall clock time and date at job start Wed Apr 1 2020 03:40:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.34493 * 126.83603 * 2 1 4 4 N 1.36441 * 108.85747 * 180.24757 * 3 2 1 5 5 H 0.97003 * 124.85286 * 179.76434 * 4 3 2 6 6 C 1.34660 * 110.29919 * 359.75244 * 4 3 2 7 7 C 1.36772 * 108.39493 * 359.97438 * 6 4 3 8 8 C 1.47259 * 126.94018 * 179.97438 * 7 6 4 9 9 O 1.21624 * 120.00513 * 143.95793 * 8 7 6 10 10 N 1.34782 * 119.99871 * 323.95062 * 8 7 6 11 11 C 1.46923 * 120.63134 * 354.07297 * 10 8 7 12 12 C 1.53186 * 108.78042 * 233.58936 * 11 10 8 13 13 C 1.53046 * 109.31302 * 305.36589 * 12 11 10 14 14 H 1.09000 * 109.44714 * 301.35534 * 13 12 11 15 15 C 1.52997 * 109.46494 * 181.38203 * 13 12 11 16 16 F 1.39901 * 109.47333 * 299.93589 * 15 13 12 17 17 F 1.39909 * 109.46846 * 59.93055 * 15 13 12 18 18 F 1.39898 * 109.47205 * 179.97438 * 15 13 12 19 19 C 1.53040 * 109.53469 * 61.35930 * 13 12 11 20 20 H 1.09001 * 109.49842 * 58.59584 * 19 13 12 21 21 N 1.46501 * 109.49514 * 178.65260 * 19 13 12 22 22 C 1.36943 * 120.00075 * 204.93865 * 21 19 13 23 23 H 1.08000 * 120.00076 * 0.02562 * 22 21 19 24 24 C 1.38811 * 120.00055 * 180.02562 * 22 21 19 25 25 N 1.31624 * 120.00016 * 359.97438 * 24 22 21 26 26 Si 1.86796 * 120.00191 * 179.97438 * 24 22 21 27 27 H 1.48504 * 109.47198 * 59.99762 * 26 24 22 28 28 H 1.48497 * 109.47447 * 179.97438 * 26 24 22 29 29 H 1.48496 * 109.47038 * 300.00029 * 26 24 22 30 30 C 1.46929 * 120.63028 * 174.05565 * 10 8 7 31 31 H 1.08995 * 109.47262 * 270.14953 * 1 2 3 32 32 H 1.09003 * 109.46857 * 30.15081 * 1 2 3 33 33 H 1.08996 * 109.46966 * 150.14712 * 1 2 3 34 34 H 1.08000 * 125.57000 * 359.96531 * 3 2 1 35 35 H 1.07996 * 125.79962 * 179.97438 * 6 4 3 36 36 H 1.08997 * 109.58623 * 113.79945 * 11 10 8 37 37 H 1.09008 * 109.70322 * 353.44684 * 11 10 8 38 38 H 1.08998 * 109.50489 * 185.41450 * 12 11 10 39 39 H 1.09001 * 109.52488 * 65.32943 * 12 11 10 40 40 H 0.97003 * 120.00158 * 24.93551 * 21 19 13 41 41 H 0.96999 * 120.00223 * 180.02562 * 25 24 22 42 42 H 1.08991 * 109.58595 * 6.62127 * 30 10 8 43 43 H 1.09005 * 109.58141 * 246.19858 * 30 10 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3133 1.0764 0.0000 4 7 3.6111 0.6553 -0.0056 5 1 4.3840 1.2413 -0.0100 6 6 3.6656 -0.6902 -0.0038 7 6 2.3863 -1.1740 0.0036 8 6 1.9749 -2.5880 0.0075 9 8 0.9906 -2.9333 0.6329 10 7 2.6891 -3.4995 -0.6823 11 6 3.8017 -3.0812 -1.5458 12 6 3.5825 -3.6592 -2.9474 13 6 3.4006 -5.1755 -2.8468 14 1 4.2825 -5.6167 -2.3823 15 6 3.2158 -5.7609 -4.2483 16 9 2.0836 -5.1951 -4.8444 17 9 4.3437 -5.4755 -5.0253 18 9 3.0501 -7.1470 -4.1565 19 6 2.1668 -5.4877 -1.9970 20 1 1.2883 -5.0257 -2.4476 21 7 1.9750 -6.9384 -1.9279 22 6 0.7288 -7.4538 -1.6895 23 1 -0.1126 -6.7907 -1.5528 24 6 0.5472 -8.8284 -1.6235 25 7 1.5726 -9.6365 -1.7907 26 14 -1.1525 -9.5314 -1.2976 27 1 -2.0818 -9.0978 -2.3716 28 1 -1.0790 -11.0144 -1.2760 29 1 -1.6479 -9.0407 0.0135 30 6 2.3699 -4.9303 -0.5847 31 1 -0.3633 0.0027 1.0276 32 1 -0.3633 0.8887 -0.5162 33 1 -0.3633 -0.8913 -0.5115 34 1 1.9868 2.1059 -0.0005 35 1 4.5664 -1.2859 -0.0076 36 1 4.7409 -3.4558 -1.1389 37 1 3.8355 -1.9930 -1.6005 38 1 4.4477 -3.4373 -3.5720 39 1 2.6909 -3.2145 -3.3895 40 1 2.7307 -7.5340 -2.0512 41 1 1.4457 -10.5970 -1.7450 42 1 1.4565 -5.0622 -0.0048 43 1 3.1925 -5.4558 -0.0993 RHF calculation, no. of doubly occupied orbitals= 64 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000998314670.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Wed Apr 1 2020 03:40:15 Heat of formation + Delta-G solvation = -120.654759 kcal Electronic energy + Delta-G solvation = -31964.474323 eV Core-core repulsion = 27210.017204 eV Total energy + Delta-G solvation = -4754.457119 eV No. of doubly occupied orbitals = 64 Molecular weight (most abundant/longest-lived isotopes) = 345.141 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -49.49674 -47.06637 -46.81162 -41.40720 -39.49867 -37.32070 -34.57167 -32.84713 -32.56004 -31.38726 -30.13765 -28.43334 -26.80969 -26.61021 -24.17674 -23.67544 -22.02360 -21.91369 -20.39415 -19.91679 -18.73513 -18.05240 -17.79605 -17.50737 -17.33356 -16.88549 -16.14554 -15.44004 -15.30321 -14.61361 -14.31481 -14.25130 -14.01371 -13.89300 -13.73153 -13.50567 -13.40792 -13.34043 -13.20059 -12.99680 -12.96664 -12.87476 -12.73863 -12.70419 -12.41672 -12.28768 -12.23683 -11.47007 -11.38868 -11.14652 -10.98091 -10.75503 -10.70915 -10.31519 -9.97907 -9.74395 -9.57630 -9.05704 -8.70995 -8.39606 -8.33595 -7.01741 -5.75270 -3.06974 1.78375 2.30542 2.99464 3.20328 3.28789 3.49887 3.53158 3.55087 3.58399 4.27221 4.37358 4.49830 4.66549 4.68529 4.77696 4.90349 4.97588 5.04870 5.23900 5.27952 5.36159 5.36926 5.47127 5.53157 5.62267 5.72851 5.77114 5.81547 5.86023 5.94671 6.02822 6.08060 6.14510 6.15189 6.57791 6.63135 6.67953 6.76849 6.91730 7.25413 7.71432 7.74489 8.40080 8.54478 9.53554 10.01541 10.37547 11.46179 Molecular weight = 345.14amu Principal moments of inertia in cm(-1) A = 0.011583 B = 0.003945 C = 0.003205 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2416.823120 B = 7096.595147 C = 8734.797727 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 C -0.114 4.114 3 C -0.026 4.026 4 N -0.553 5.553 5 H 0.416 0.584 6 C 0.035 3.965 7 C -0.214 4.214 8 C 0.586 3.414 9 O -0.536 6.536 10 N -0.609 5.609 11 C 0.106 3.894 12 C -0.130 4.130 13 C -0.141 4.141 14 H 0.110 0.890 15 C 0.457 3.543 16 F -0.186 7.186 17 F -0.200 7.200 18 F -0.154 7.154 19 C 0.172 3.828 20 H 0.065 0.935 21 N -0.715 5.715 22 C -0.246 4.246 23 H 0.072 0.928 24 C -0.003 4.003 25 N -0.927 5.927 26 Si 0.907 3.093 27 H -0.285 1.285 28 H -0.291 1.291 29 H -0.284 1.284 30 C 0.099 3.901 31 H 0.066 0.934 32 H 0.058 0.942 33 H 0.068 0.932 34 H 0.167 0.833 35 H 0.174 0.826 36 H 0.069 0.931 37 H 0.096 0.904 38 H 0.084 0.916 39 H 0.080 0.920 40 H 0.390 0.610 41 H 0.256 0.744 42 H 0.100 0.900 43 H 0.065 0.935 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 9.749 22.243 -0.260 24.287 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.137 4.137 2 C -0.121 4.121 3 C -0.153 4.153 4 N -0.147 5.147 5 H 0.252 0.748 6 C -0.100 4.100 7 C -0.225 4.225 8 C 0.374 3.626 9 O -0.413 6.413 10 N -0.343 5.343 11 C -0.018 4.018 12 C -0.169 4.169 13 C -0.162 4.162 14 H 0.128 0.872 15 C 0.402 3.598 16 F -0.168 7.168 17 F -0.182 7.182 18 F -0.135 7.135 19 C 0.060 3.940 20 H 0.083 0.917 21 N -0.357 5.357 22 C -0.377 4.377 23 H 0.090 0.910 24 C -0.200 4.200 25 N -0.574 5.574 26 Si 0.737 3.263 27 H -0.212 1.212 28 H -0.217 1.217 29 H -0.211 1.211 30 C -0.026 4.026 31 H 0.085 0.915 32 H 0.077 0.923 33 H 0.087 0.913 34 H 0.184 0.816 35 H 0.191 0.809 36 H 0.087 0.913 37 H 0.114 0.886 38 H 0.102 0.898 39 H 0.099 0.901 40 H 0.226 0.774 41 H 0.066 0.934 42 H 0.118 0.882 43 H 0.083 0.917 Dipole moment (debyes) X Y Z Total from point charges 9.110 22.026 0.065 23.835 hybrid contribution -0.095 -0.566 -0.159 0.596 sum 9.015 21.459 -0.094 23.276 Atomic orbital electron populations 1.20125 0.89422 1.02075 1.02120 1.20545 0.95559 0.90401 1.05553 1.21526 0.82477 0.99075 1.12251 1.41471 1.08185 1.06635 1.58443 0.74790 1.21984 0.98523 0.83640 1.05869 1.20446 0.92796 0.93049 1.16189 1.17490 0.82362 0.83965 0.78740 1.90782 1.26004 1.80699 1.43790 1.48146 1.33006 1.07749 1.45402 1.21887 0.89738 1.00869 0.89289 1.21963 1.03781 0.93031 0.98121 1.22836 1.04418 0.97433 0.91491 0.87217 1.20443 0.73062 0.77781 0.88472 1.93132 1.52667 1.85026 1.85943 1.93112 1.53004 1.93605 1.78448 1.93316 1.94982 1.29218 1.96028 1.20500 0.93203 0.88041 0.92236 0.91691 1.42497 1.09385 0.98353 1.85492 1.19149 0.86311 0.90373 1.41878 0.90983 1.24720 0.97311 0.95958 1.02027 1.69660 1.29080 1.02727 1.55928 0.86281 0.83933 0.77811 0.78239 1.21172 1.21724 1.21067 1.22685 1.02744 0.76982 1.00169 0.91508 0.92302 0.91283 0.81553 0.80913 0.91313 0.88598 0.89784 0.90123 0.77411 0.93414 0.88176 0.91716 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.93 10.10 36.00 0.36 -0.56 16 2 C -0.11 -1.34 6.35 -102.54 -0.65 -1.99 16 3 C -0.03 -0.21 11.82 -16.82 -0.20 -0.41 16 4 N -0.55 -3.58 5.90 -12.85 -0.08 -3.66 16 5 H 0.42 1.14 8.96 -40.82 -0.37 0.78 16 6 C 0.03 0.30 9.49 -16.84 -0.16 0.14 16 7 C -0.21 -2.75 5.51 -103.35 -0.57 -3.32 16 8 C 0.59 9.62 7.56 -12.59 -0.10 9.52 16 9 O -0.54 -11.07 16.19 5.26 0.09 -10.99 16 10 N -0.61 -9.03 2.97 -174.10 -0.52 -9.54 16 11 C 0.11 1.11 5.35 -3.72 -0.02 1.09 16 12 C -0.13 -1.53 5.12 -26.61 -0.14 -1.66 16 13 C -0.14 -2.17 1.82 -90.58 -0.16 -2.34 16 14 H 0.11 1.56 8.14 -51.93 -0.42 1.14 16 15 C 0.46 8.02 2.68 37.16 0.10 8.12 16 16 F -0.19 -3.46 16.33 2.25 0.04 -3.42 16 17 F -0.20 -3.14 16.77 2.25 0.04 -3.10 16 18 F -0.15 -3.34 14.67 2.25 0.03 -3.31 16 19 C 0.17 3.32 2.24 -67.81 -0.15 3.17 16 20 H 0.07 1.38 7.78 -51.93 -0.40 0.98 16 21 N -0.72 -17.32 3.85 -53.31 -0.21 -17.52 16 22 C -0.25 -6.80 9.93 -15.06 -0.15 -6.95 16 23 H 0.07 1.98 7.83 -52.49 -0.41 1.57 16 24 C 0.00 -0.10 5.50 -17.43 -0.10 -0.19 16 25 N -0.93 -27.71 13.06 55.49 0.72 -26.99 16 26 Si 0.91 22.78 29.55 -169.99 -5.02 17.76 16 27 H -0.29 -7.11 7.11 56.52 0.40 -6.71 16 28 H -0.29 -7.34 7.11 56.52 0.40 -6.94 16 29 H -0.28 -7.08 7.11 56.52 0.40 -6.68 16 30 C 0.10 1.79 6.03 -3.71 -0.02 1.76 16 31 H 0.07 0.77 8.14 -51.93 -0.42 0.35 16 32 H 0.06 0.52 8.14 -51.93 -0.42 0.10 16 33 H 0.07 0.95 8.07 -51.93 -0.42 0.53 16 34 H 0.17 0.86 8.06 -52.49 -0.42 0.44 16 35 H 0.17 1.04 6.97 -52.49 -0.37 0.68 16 36 H 0.07 0.59 8.14 -51.93 -0.42 0.17 16 37 H 0.10 0.83 4.60 -51.92 -0.24 0.59 16 38 H 0.08 0.79 7.76 -51.93 -0.40 0.39 16 39 H 0.08 1.03 7.85 -51.93 -0.41 0.62 16 40 H 0.39 9.97 6.54 -40.82 -0.27 9.70 16 41 H 0.26 7.47 8.31 -40.82 -0.34 7.13 16 42 H 0.10 2.15 7.00 -51.93 -0.36 1.79 16 43 H 0.06 1.14 8.14 -51.93 -0.42 0.71 16 LS Contribution 360.57 15.07 5.43 5.43 Total: -1.00 -34.88 360.57 -6.74 -41.62 By element: Atomic # 1 Polarization: 12.65 SS G_CDS: -5.32 Total: 7.33 kcal Atomic # 6 Polarization: 8.33 SS G_CDS: -1.95 Total: 6.38 kcal Atomic # 7 Polarization: -57.64 SS G_CDS: -0.07 Total: -57.71 kcal Atomic # 8 Polarization: -11.07 SS G_CDS: 0.09 Total: -10.99 kcal Atomic # 9 Polarization: -9.94 SS G_CDS: 0.11 Total: -9.83 kcal Atomic # 14 Polarization: 22.78 SS G_CDS: -5.02 Total: 17.76 kcal Total LS contribution 5.43 Total: 5.43 kcal Total: -34.88 -6.74 -41.62 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000998314670.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -79.036 kcal (2) G-P(sol) polarization free energy of solvation -34.879 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -113.914 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.740 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.619 kcal (6) G-S(sol) free energy of system = (1) + (5) -120.655 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds