Wall clock time and date at job start Wed Apr 1 2020 04:26:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13600 * 1 3 3 C 1.47202 * 179.97438 * 2 1 4 4 C 1.53000 * 109.47005 * 224.66525 * 3 2 1 5 5 N 1.46504 * 109.47304 * 179.97438 * 4 3 2 6 6 C 1.46496 * 119.99880 * 270.00471 * 5 4 3 7 7 C 1.50703 * 109.47077 * 269.99336 * 6 5 4 8 8 H 1.08005 * 119.99703 * 0.02562 * 7 6 5 9 9 C 1.37872 * 120.00292 * 180.02562 * 7 6 5 10 10 N 1.31518 * 119.99761 * 359.97438 * 9 7 6 11 11 Si 1.86803 * 120.00272 * 180.02562 * 9 7 6 12 12 H 1.48498 * 109.47206 * 59.99702 * 11 9 7 13 13 H 1.48496 * 109.47019 * 179.97438 * 11 9 7 14 14 H 1.48494 * 109.46839 * 299.99831 * 11 9 7 15 15 C 1.34777 * 119.99854 * 89.99731 * 5 4 3 16 16 O 1.21274 * 120.00135 * 180.27973 * 15 5 4 17 17 C 1.50706 * 119.99766 * 0.02562 * 15 5 4 18 18 O 1.42906 * 109.46699 * 179.97438 * 17 15 5 19 19 C 1.35702 * 116.99668 * 179.97438 * 18 17 15 20 20 C 1.38594 * 120.14238 * 359.73155 * 19 18 17 21 21 C 1.38246 * 120.07622 * 179.76601 * 20 19 18 22 22 Cl 1.73608 * 119.81709 * 180.25551 * 21 20 19 23 23 C 1.38656 * 120.36699 * 0.50482 * 21 20 19 24 24 C 1.37775 * 120.28083 * 359.74632 * 23 21 20 25 25 C 1.39743 * 119.91436 * 0.02562 * 24 23 21 26 26 C 1.43199 * 120.17712 * 179.97438 * 25 24 23 27 27 N 9.21875 * 141.12153 * 149.09846 * 2 1 3 28 28 H 1.08994 * 109.46905 * 104.66793 * 3 2 1 29 29 H 1.08996 * 109.47181 * 344.66715 * 3 2 1 30 30 H 1.09001 * 109.46783 * 60.00107 * 4 3 2 31 31 H 1.08996 * 109.47306 * 300.00114 * 4 3 2 32 32 H 1.08997 * 109.47682 * 29.99532 * 6 5 4 33 33 H 1.09004 * 109.47271 * 149.99629 * 6 5 4 34 34 H 0.96999 * 119.99754 * 180.02562 * 10 9 7 35 35 H 1.09000 * 109.47161 * 299.99737 * 17 15 5 36 36 H 1.09001 * 109.46740 * 59.99879 * 17 15 5 37 37 H 1.07994 * 119.95957 * 359.97438 * 20 19 18 38 38 H 1.08006 * 119.86148 * 179.72218 * 23 21 20 39 39 H 1.08005 * 120.03803 * 179.97438 * 24 23 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 6 3.1175 1.0268 1.0140 5 7 4.5826 1.0271 1.0145 6 6 5.3149 0.1355 1.9172 7 6 5.5656 0.8404 3.2254 8 1 5.2142 1.8513 3.3700 9 6 6.2436 0.1948 4.2375 10 7 6.6711 -1.0364 4.0615 11 14 6.5538 1.0683 5.8593 12 1 5.2557 1.4403 6.4774 13 1 7.2962 0.1645 6.7742 14 1 7.3554 2.2943 5.6157 15 6 5.2565 1.8476 0.1844 16 8 6.4693 1.8442 0.1812 17 6 4.5031 2.7651 -0.7438 18 8 5.4318 3.5290 -1.5158 19 6 4.9132 4.4103 -2.4080 20 6 3.5397 4.5357 -2.5443 21 6 3.0128 5.4373 -3.4502 22 17 1.2913 5.5937 -3.6106 23 6 3.8517 6.2138 -4.2350 24 6 5.2194 6.0976 -4.1155 25 6 5.7646 5.1933 -3.2002 26 6 7.1853 5.0675 -3.0717 27 7 8.3126 4.9650 -2.9717 28 1 2.9712 0.2610 -0.9941 29 1 2.9718 -0.9902 0.2717 30 1 2.7543 0.7664 2.0082 31 1 2.7538 2.0177 0.7423 32 1 4.7260 -0.7641 2.0962 33 1 6.2675 -0.1383 1.4636 34 1 7.1478 -1.4908 4.7737 35 1 3.8764 2.1728 -1.4106 36 1 3.8764 3.4387 -0.1592 37 1 2.8803 3.9308 -1.9397 38 1 3.4313 6.9124 -4.9433 39 1 5.8692 6.7040 -4.7291 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000268469339.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Wed Apr 1 2020 04:26:27 Heat of formation + Delta-G solvation = 10.005126 kcal Electronic energy + Delta-G solvation = -26547.049304 eV Core-core repulsion = 22481.846259 eV Total energy + Delta-G solvation = -4065.203044 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 347.082 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -40.92316 -39.43922 -37.97761 -37.07462 -36.92095 -36.22423 -35.39731 -33.00442 -31.71555 -31.01550 -30.91637 -29.13874 -26.82254 -24.34844 -24.18189 -23.43884 -22.39019 -19.82759 -18.95544 -18.19606 -17.82796 -16.94538 -16.63002 -16.50195 -16.36047 -15.81914 -15.52569 -14.88918 -14.82079 -14.63209 -14.40146 -13.99470 -13.82702 -13.58161 -13.37426 -13.30379 -13.09295 -12.95178 -12.58656 -12.48503 -12.37360 -12.21207 -11.97841 -11.84139 -11.77028 -11.45724 -11.37870 -11.24654 -11.08884 -10.94253 -10.68704 -10.26624 -9.82926 -9.43735 -9.24991 -8.75214 -8.53439 -8.04642 -6.15699 -4.21124 0.18615 0.76423 1.54636 2.40244 2.56573 2.61919 2.62469 2.70737 3.00285 3.26738 3.32171 3.35053 3.48411 3.55761 3.65168 4.00594 4.23579 4.36070 4.40498 4.52131 4.66740 4.71525 4.81501 4.85386 4.95074 5.00173 5.02734 5.20108 5.29244 5.34037 5.60573 5.63387 5.66799 5.90097 5.93554 6.64275 6.85646 7.19473 7.28841 7.45206 7.46766 7.79251 8.00863 8.07581 8.63299 8.83600 9.44893 10.92479 Molecular weight = 347.08amu Principal moments of inertia in cm(-1) A = 0.009302 B = 0.003168 C = 0.002564 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 3009.368947 B = 8835.936555 C =10916.927016 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.440 5.440 2 C 0.214 3.786 3 C -0.052 4.052 4 C 0.112 3.888 5 N -0.591 5.591 6 C 0.247 3.753 7 C -0.534 4.534 8 H 0.059 0.941 9 C 0.065 3.935 10 N -0.892 5.892 11 Si 0.898 3.102 12 H -0.276 1.276 13 H -0.286 1.286 14 H -0.276 1.276 15 C 0.509 3.491 16 O -0.503 6.503 17 C 0.030 3.970 18 O -0.272 6.272 19 C 0.196 3.804 20 C -0.208 4.208 21 C 0.033 3.967 22 Cl -0.055 7.055 23 C -0.154 4.154 24 C -0.018 4.018 25 C -0.054 4.054 26 C 0.255 3.745 27 N -0.400 5.400 28 H 0.106 0.894 29 H 0.121 0.879 30 H 0.101 0.899 31 H 0.074 0.926 32 H 0.040 0.960 33 H 0.049 0.951 34 H 0.265 0.735 35 H 0.094 0.906 36 H 0.097 0.903 37 H 0.150 0.850 38 H 0.146 0.854 39 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.291 11.792 -17.287 23.778 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.117 5.117 2 C -0.104 4.104 3 C -0.094 4.094 4 C -0.014 4.014 5 N -0.324 5.324 6 C 0.129 3.871 7 C -0.573 4.573 8 H 0.077 0.923 9 C -0.138 4.138 10 N -0.530 5.530 11 Si 0.725 3.275 12 H -0.202 1.202 13 H -0.211 1.211 14 H -0.201 1.201 15 C 0.293 3.707 16 O -0.377 6.377 17 C -0.048 4.048 18 O -0.182 6.182 19 C 0.145 3.855 20 C -0.227 4.227 21 C 0.005 3.995 22 Cl -0.025 7.025 23 C -0.173 4.173 24 C -0.039 4.039 25 C -0.058 4.058 26 C -0.061 4.061 27 N -0.075 5.075 28 H 0.124 0.876 29 H 0.139 0.861 30 H 0.119 0.881 31 H 0.092 0.908 32 H 0.058 0.942 33 H 0.067 0.933 34 H 0.075 0.925 35 H 0.112 0.888 36 H 0.115 0.885 37 H 0.168 0.832 38 H 0.164 0.836 39 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges -10.394 11.403 -16.967 22.934 hybrid contribution -0.359 0.349 1.038 1.153 sum -10.753 11.751 -15.929 22.527 Atomic orbital electron populations 1.81231 1.12973 1.08778 1.08745 1.29039 0.95031 0.93181 0.93134 1.19904 0.81530 1.04917 1.03004 1.21400 0.81966 0.97628 1.00384 1.48159 1.04953 1.40550 1.38763 1.19425 0.92694 0.87810 0.87185 1.21353 1.37274 1.00625 0.98049 0.92311 1.24906 0.95112 0.94890 0.98917 1.69902 1.37924 1.11444 1.33777 0.86562 0.78448 0.79602 0.82881 1.20178 1.21131 1.20105 1.19613 0.88174 0.81548 0.81362 1.90785 1.13251 1.66253 1.67405 1.22990 0.92194 0.95037 0.94566 1.86255 1.34620 1.49116 1.48207 1.18841 0.90539 0.88144 0.87960 1.21077 0.93637 1.04041 1.03968 1.20890 0.85544 0.96548 0.96533 1.98416 1.10378 1.96883 1.96866 1.20867 0.92248 1.02137 1.02016 1.20979 0.94668 0.94074 0.94132 1.15354 0.84844 1.02946 1.02659 1.25147 0.92158 0.94395 0.94382 1.81275 1.12037 1.07121 1.07109 0.87645 0.86143 0.88095 0.90764 0.94249 0.93344 0.92485 0.88779 0.88527 0.83191 0.83634 0.83181 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.44 -5.84 18.54 42.15 0.78 -5.06 16 2 C 0.21 2.24 15.43 -20.76 -0.32 1.91 16 3 C -0.05 -0.45 6.03 -29.52 -0.18 -0.63 16 4 C 0.11 1.27 5.17 -4.04 -0.02 1.25 16 5 N -0.59 -9.88 2.46 -175.06 -0.43 -10.31 16 6 C 0.25 5.56 5.16 -5.19 -0.03 5.53 16 7 C -0.53 -13.80 9.39 -34.44 -0.32 -14.13 16 8 H 0.06 1.51 7.81 -52.48 -0.41 1.10 16 9 C 0.06 1.73 5.46 -17.82 -0.10 1.64 16 10 N -0.89 -24.97 13.29 55.43 0.74 -24.23 16 11 Si 0.90 20.89 29.54 -169.99 -5.02 15.87 16 12 H -0.28 -6.23 7.11 56.52 0.40 -5.83 16 13 H -0.29 -6.61 7.11 56.52 0.40 -6.21 16 14 H -0.28 -6.52 7.11 56.52 0.40 -6.11 16 15 C 0.51 8.85 7.75 -10.98 -0.09 8.76 16 16 O -0.50 -11.74 16.08 -14.35 -0.23 -11.97 16 17 C 0.03 0.35 3.77 36.01 0.14 0.49 16 18 O -0.27 -3.72 9.10 -38.72 -0.35 -4.07 16 19 C 0.20 2.02 6.69 -38.72 -0.26 1.77 16 20 C -0.21 -1.62 8.80 -39.45 -0.35 -1.97 16 21 C 0.03 0.23 6.32 -39.42 -0.25 -0.02 16 22 Cl -0.05 -0.38 28.94 -51.86 -1.50 -1.88 16 23 C -0.15 -0.87 9.80 -39.60 -0.39 -1.25 16 24 C -0.02 -0.11 9.75 -39.19 -0.38 -0.49 16 25 C -0.05 -0.53 5.75 -106.67 -0.61 -1.14 16 26 C 0.25 3.37 14.87 -22.46 -0.33 3.04 16 27 N -0.40 -6.44 18.54 41.85 0.78 -5.67 16 28 H 0.11 0.67 7.22 -51.93 -0.38 0.29 16 29 H 0.12 1.05 8.14 -51.93 -0.42 0.63 16 30 H 0.10 1.24 8.07 -51.93 -0.42 0.82 16 31 H 0.07 0.62 6.44 -51.93 -0.33 0.29 16 32 H 0.04 0.87 8.07 -51.93 -0.42 0.45 16 33 H 0.05 1.27 7.42 -51.93 -0.39 0.88 16 34 H 0.27 7.10 8.31 -40.82 -0.34 6.76 16 35 H 0.09 0.71 6.69 -51.93 -0.35 0.37 16 36 H 0.10 0.86 6.94 -51.93 -0.36 0.50 16 37 H 0.15 0.93 6.30 -52.49 -0.33 0.59 16 38 H 0.15 0.49 8.06 -52.48 -0.42 0.07 16 39 H 0.15 0.56 8.06 -52.48 -0.42 0.13 16 LS Contribution 375.48 15.07 5.66 5.66 Total: -1.00 -35.32 375.48 -6.86 -42.17 By element: Atomic # 1 Polarization: -1.48 SS G_CDS: -3.78 Total: -5.26 kcal Atomic # 6 Polarization: 8.23 SS G_CDS: -3.49 Total: 4.74 kcal Atomic # 7 Polarization: -47.13 SS G_CDS: 1.86 Total: -45.27 kcal Atomic # 8 Polarization: -15.46 SS G_CDS: -0.58 Total: -16.04 kcal Atomic # 14 Polarization: 20.89 SS G_CDS: -5.02 Total: 15.87 kcal Atomic # 17 Polarization: -0.38 SS G_CDS: -1.50 Total: -1.88 kcal Total LS contribution 5.66 Total: 5.66 kcal Total: -35.32 -6.86 -42.17 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000268469339.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 52.179 kcal (2) G-P(sol) polarization free energy of solvation -35.317 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 16.861 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.856 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.174 kcal (6) G-S(sol) free energy of system = (1) + (5) 10.005 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds