Wall clock time and date at job start Wed Apr 1 2020 04:37:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 H 1.09005 * 109.47291 * 2 1 4 4 N 1.46499 * 109.47486 * 239.99964 * 2 1 3 5 5 C 1.34775 * 119.99894 * 84.99474 * 4 2 1 6 6 O 1.21606 * 120.00111 * 0.02562 * 5 4 2 7 7 C 1.47422 * 119.99915 * 180.02562 * 5 4 2 8 8 C 1.36088 * 126.44888 * 180.02562 * 7 5 4 9 9 O 1.34253 * 106.95015 * 179.97438 * 8 7 5 10 10 C 1.34045 * 108.22961 * 359.97438 * 9 8 7 11 11 C 1.50699 * 125.38281 * 180.02562 * 10 9 8 12 12 C 1.53781 * 113.61381 * 37.47063 * 11 10 9 13 13 C 1.53783 * 87.08204 * 220.02135 * 12 11 10 14 14 C 1.53781 * 87.07984 * 25.43378 * 13 12 11 15 15 N 1.29939 * 109.24194 * 359.74544 * 10 9 8 16 16 C 1.53006 * 109.47301 * 119.99918 * 2 1 3 17 17 H 1.09003 * 109.52279 * 180.02562 * 16 2 1 18 18 C 1.53042 * 109.49496 * 300.16257 * 16 2 1 19 19 C 1.53358 * 109.60286 * 181.32351 * 18 16 2 20 20 C 1.53190 * 109.14937 * 298.71210 * 19 18 16 21 21 N 1.46924 * 108.89627 * 54.58001 * 20 19 18 22 22 C 1.36930 * 120.63300 * 126.33733 * 21 20 19 23 23 H 1.08005 * 120.00167 * 331.83136 * 22 21 20 24 24 C 1.38816 * 120.00324 * 151.82723 * 22 21 20 25 25 N 1.31624 * 119.99356 * 343.06571 * 24 22 21 26 26 Si 1.86793 * 120.00395 * 163.06593 * 24 22 21 27 27 H 1.48500 * 109.46960 * 359.97438 * 26 24 22 28 28 H 1.48494 * 109.47338 * 119.99948 * 26 24 22 29 29 H 1.48503 * 109.47085 * 239.99957 * 26 24 22 30 30 C 1.46930 * 118.73859 * 306.32351 * 21 20 19 31 31 H 1.08998 * 109.46774 * 299.99574 * 1 2 3 32 32 H 1.08996 * 109.46910 * 60.00391 * 1 2 3 33 33 H 1.09004 * 109.46609 * 180.02562 * 1 2 3 34 34 H 0.97003 * 119.99848 * 265.00643 * 4 2 1 35 35 H 1.08001 * 126.52653 * 359.94518 * 8 7 5 36 36 H 1.08996 * 112.85121 * 168.77891 * 11 10 9 37 37 H 1.08999 * 113.61857 * 334.56956 * 12 11 10 38 38 H 1.08996 * 113.61402 * 105.47118 * 12 11 10 39 39 H 1.08997 * 113.61577 * 270.88026 * 13 12 11 40 40 H 1.09007 * 113.61565 * 139.97979 * 13 12 11 41 41 H 1.08995 * 113.61399 * 220.01826 * 14 13 12 42 42 H 1.08998 * 113.61766 * 89.11757 * 14 13 12 43 43 H 1.08998 * 109.46031 * 301.33617 * 18 16 2 44 44 H 1.08999 * 109.45876 * 61.31331 * 18 16 2 45 45 H 1.08996 * 109.67935 * 178.74691 * 19 18 16 46 46 H 1.08996 * 109.47244 * 58.55500 * 19 18 16 47 47 H 1.09000 * 109.58857 * 294.72113 * 20 19 18 48 48 H 1.09000 * 109.58354 * 174.44083 * 20 19 18 49 49 H 0.96997 * 119.99488 * 180.02562 * 25 24 22 50 50 H 1.08997 * 109.59094 * 173.39705 * 30 21 20 51 51 H 1.09008 * 109.58128 * 293.67719 * 30 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8934 1.0277 0.0000 4 7 2.0184 -0.6906 -1.1961 5 6 2.1471 -0.0183 -2.3571 6 8 1.8582 1.1617 -2.4116 7 6 2.6380 -0.7133 -3.5609 8 6 2.8179 -0.1659 -4.7938 9 8 3.2765 -1.1426 -5.5926 10 6 3.3769 -2.2652 -4.8671 11 6 3.8543 -3.5981 -5.3834 12 6 5.0033 -3.4894 -6.3996 13 6 4.3112 -4.6163 -7.1844 14 6 2.9969 -4.1570 -6.5312 15 7 3.0031 -2.0213 -3.6467 16 6 2.0401 -0.7212 1.2493 17 1 3.1301 -0.7213 1.2503 18 6 1.5269 -0.0026 2.4992 19 6 2.0638 -0.7040 3.7529 20 6 1.5534 -2.1481 3.7782 21 7 1.9181 -2.8039 2.5151 22 6 2.6066 -3.9876 2.5168 23 1 3.2674 -4.2267 3.3370 24 6 2.4552 -4.8802 1.4645 25 7 1.4301 -4.7658 0.6469 26 14 3.7062 -6.2436 1.2089 27 1 4.7558 -6.1550 2.2558 28 1 3.0275 -7.5613 1.2982 29 1 4.3304 -6.0980 -0.1307 30 6 1.5298 -2.1657 1.2499 31 1 -0.3633 0.5138 0.8900 32 1 -0.3633 0.5138 -0.8900 33 1 -0.3633 -1.0277 0.0005 34 1 2.2490 -1.6318 -1.1526 35 1 2.6275 0.8591 -5.0760 36 1 4.0407 -4.3184 -4.5869 37 1 5.0275 -2.5382 -6.9313 38 1 5.9741 -3.7729 -5.9930 39 1 4.6238 -5.6154 -6.8810 40 1 4.3347 -4.4742 -8.2649 41 1 2.3479 -4.9795 -6.2308 42 1 2.4725 -3.3883 -7.0988 43 1 1.8682 1.0325 2.4888 44 1 0.4372 -0.0256 2.5097 45 1 1.7172 -0.1799 4.6435 46 1 3.1535 -0.7035 3.7309 47 1 0.4693 -2.1506 3.8914 48 1 2.0091 -2.6821 4.6121 49 1 1.3242 -5.3897 -0.0881 50 1 1.9719 -2.7098 0.4153 51 1 0.4438 -2.1718 1.1558 RHF calculation, no. of doubly occupied orbitals= 66 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001025592081.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Wed Apr 1 2020 04:37:40 Heat of formation + Delta-G solvation = 17.092064 kcal Electronic energy + Delta-G solvation = -31550.547456 eV Core-core repulsion = 27452.441844 eV Total energy + Delta-G solvation = -4098.105613 eV No. of doubly occupied orbitals = 66 Molecular weight (most abundant/longest-lived isotopes) = 347.200 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -43.48204 -39.61635 -38.86856 -37.86743 -35.01942 -34.86452 -33.02182 -31.35138 -30.60380 -29.82725 -28.14726 -26.35346 -25.97874 -25.27265 -24.77054 -23.17759 -22.17985 -21.74908 -20.80830 -20.07205 -19.45602 -18.58484 -17.96905 -16.87055 -16.82886 -16.45921 -15.92092 -15.70362 -15.38433 -14.87839 -14.55160 -14.18962 -14.05075 -13.72383 -13.60859 -13.46700 -13.08142 -12.98106 -12.85751 -12.71541 -12.54190 -12.32248 -12.15936 -11.71771 -11.48532 -11.32557 -11.27187 -11.00085 -10.83267 -10.82145 -10.76465 -10.74513 -10.60154 -10.39550 -10.14631 -10.11913 -9.91193 -9.87074 -9.50267 -9.35739 -9.04571 -8.66296 -8.45087 -6.63467 -5.77546 -3.19682 1.09774 2.02173 2.47983 3.35170 3.37471 3.45434 3.47076 3.47624 3.81123 4.20611 4.30432 4.50571 4.51902 4.59326 4.80311 4.93669 5.17787 5.32261 5.33818 5.37526 5.38676 5.48878 5.53444 5.57774 5.60300 5.61863 5.62232 5.65227 5.73382 5.75009 5.80951 5.93318 6.02372 6.09688 6.12102 6.24651 6.32003 6.32844 6.48658 6.51887 6.57593 6.70886 6.82365 6.87502 6.93082 7.04436 7.35053 7.47521 7.62334 7.81149 7.90707 8.42510 8.46597 9.22901 9.86128 10.43474 11.30586 Molecular weight = 347.20amu Principal moments of inertia in cm(-1) A = 0.008967 B = 0.003787 C = 0.002794 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 3121.955395 B = 7391.432949 C =10018.155993 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.165 4.165 2 C 0.152 3.848 3 H 0.079 0.921 4 N -0.695 5.695 5 C 0.599 3.401 6 O -0.550 6.550 7 C -0.065 4.065 8 C 0.001 3.999 9 O -0.197 6.197 10 C 0.207 3.793 11 C -0.021 4.021 12 C -0.132 4.132 13 C -0.139 4.139 14 C -0.130 4.130 15 N -0.449 5.449 16 C -0.123 4.123 17 H 0.068 0.932 18 C -0.101 4.101 19 C -0.134 4.134 20 C 0.144 3.856 21 N -0.592 5.592 22 C -0.253 4.253 23 H 0.065 0.935 24 C 0.005 3.995 25 N -0.900 5.900 26 Si 0.898 3.102 27 H -0.279 1.279 28 H -0.291 1.291 29 H -0.288 1.288 30 C 0.177 3.823 31 H 0.065 0.935 32 H 0.051 0.949 33 H 0.070 0.930 34 H 0.417 0.583 35 H 0.229 0.771 36 H 0.135 0.865 37 H 0.088 0.912 38 H 0.079 0.921 39 H 0.087 0.913 40 H 0.074 0.926 41 H 0.081 0.919 42 H 0.086 0.914 43 H 0.046 0.954 44 H 0.060 0.940 45 H 0.051 0.949 46 H 0.056 0.944 47 H 0.017 0.983 48 H 0.051 0.949 49 H 0.253 0.747 50 H 0.086 0.914 51 H 0.025 0.975 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.331 6.129 -13.363 15.074 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.223 4.223 2 C 0.047 3.953 3 H 0.097 0.903 4 N -0.346 5.346 5 C 0.384 3.616 6 O -0.430 6.430 7 C -0.185 4.185 8 C -0.072 4.072 9 O -0.083 6.083 10 C -0.002 4.002 11 C -0.040 4.040 12 C -0.171 4.171 13 C -0.176 4.176 14 C -0.168 4.168 15 N -0.178 5.178 16 C -0.144 4.144 17 H 0.087 0.913 18 C -0.139 4.139 19 C -0.173 4.173 20 C 0.018 3.982 21 N -0.314 5.314 22 C -0.382 4.382 23 H 0.082 0.918 24 C -0.194 4.194 25 N -0.544 5.544 26 Si 0.728 3.272 27 H -0.204 1.204 28 H -0.218 1.218 29 H -0.214 1.214 30 C 0.051 3.949 31 H 0.084 0.916 32 H 0.070 0.930 33 H 0.088 0.912 34 H 0.255 0.745 35 H 0.246 0.754 36 H 0.153 0.847 37 H 0.107 0.893 38 H 0.097 0.903 39 H 0.106 0.894 40 H 0.093 0.907 41 H 0.100 0.900 42 H 0.105 0.895 43 H 0.065 0.935 44 H 0.079 0.921 45 H 0.069 0.931 46 H 0.075 0.925 47 H 0.035 0.965 48 H 0.070 0.930 49 H 0.063 0.937 50 H 0.104 0.896 51 H 0.043 0.957 Dipole moment (debyes) X Y Z Total from point charges 3.081 6.372 -12.996 14.798 hybrid contribution 0.650 -0.560 -0.589 1.041 sum 3.732 5.811 -13.584 15.239 Atomic orbital electron populations 1.22262 0.95392 1.03108 1.01539 1.21025 0.94248 0.96312 0.83687 0.90290 1.46087 1.64468 1.15314 1.08745 1.16759 0.77519 0.85475 0.81841 1.90772 1.52278 1.14938 1.84963 1.21932 1.09235 0.91061 0.96291 1.25213 0.98956 0.94137 0.88918 1.84314 1.64161 1.18559 1.41291 1.26084 0.99877 0.89250 0.84979 1.21341 0.97847 0.86933 0.97868 1.23021 0.97475 1.00118 0.96442 1.22818 0.95851 0.98847 1.00114 1.23017 0.97060 1.01233 0.95531 1.70903 1.14240 1.14011 1.18597 1.22135 1.00660 0.99670 0.91936 0.91341 1.21482 1.00310 0.97479 0.94645 1.22057 1.00651 0.98345 0.96260 1.20915 0.96335 0.90995 0.89997 1.44010 1.65421 1.22539 0.99428 1.19218 1.17813 0.94045 1.07167 0.91766 1.25010 0.96992 0.97378 1.00034 1.70025 1.27282 1.38318 1.18773 0.86287 0.81243 0.81839 0.77831 1.20369 1.21787 1.21439 1.20864 0.96728 0.86936 0.90393 0.91566 0.93026 0.91152 0.74490 0.75440 0.84697 0.89304 0.90255 0.89397 0.90693 0.90028 0.89504 0.93507 0.92128 0.93076 0.92504 0.96544 0.93000 0.93671 0.89637 0.95685 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -2.73 8.79 37.16 0.33 -2.40 16 2 C 0.15 2.64 2.41 -67.93 -0.16 2.48 16 3 H 0.08 1.37 7.58 -51.93 -0.39 0.97 16 4 N -0.70 -12.67 5.00 -54.88 -0.27 -12.95 16 5 C 0.60 10.68 7.78 -12.52 -0.10 10.58 16 6 O -0.55 -10.45 16.55 5.27 0.09 -10.37 16 7 C -0.06 -1.05 6.99 -83.02 -0.58 -1.63 16 8 C 0.00 0.02 11.94 29.96 0.36 0.38 16 9 O -0.20 -2.44 10.39 6.54 0.07 -2.37 16 10 C 0.21 2.80 7.33 -13.08 -0.10 2.71 16 11 C -0.02 -0.22 4.29 -90.96 -0.39 -0.61 16 12 C -0.13 -1.06 7.62 -25.92 -0.20 -1.25 16 13 C -0.14 -0.94 8.08 -25.92 -0.21 -1.15 16 14 C -0.13 -1.10 7.63 -25.92 -0.20 -1.29 16 15 N -0.45 -7.47 11.06 -7.66 -0.08 -7.55 16 16 C -0.12 -2.32 2.33 -90.50 -0.21 -2.53 16 17 H 0.07 1.38 8.14 -51.93 -0.42 0.95 16 18 C -0.10 -1.69 4.78 -26.52 -0.13 -1.82 16 19 C -0.13 -2.33 6.11 -26.45 -0.16 -2.49 16 20 C 0.14 3.01 6.50 -3.71 -0.02 2.99 16 21 N -0.59 -14.63 2.99 -172.32 -0.52 -15.14 16 22 C -0.25 -6.88 9.58 -15.06 -0.14 -7.02 16 23 H 0.06 1.74 7.89 -52.48 -0.41 1.32 16 24 C 0.00 0.12 4.92 -17.43 -0.09 0.04 16 25 N -0.90 -25.44 11.20 55.49 0.62 -24.81 16 26 Si 0.90 21.49 29.59 -169.99 -5.03 16.46 16 27 H -0.28 -6.57 7.11 56.52 0.40 -6.16 16 28 H -0.29 -7.02 7.11 56.52 0.40 -6.62 16 29 H -0.29 -6.87 7.11 56.52 0.40 -6.47 16 30 C 0.18 4.05 4.08 -3.71 -0.02 4.03 16 31 H 0.07 0.98 6.46 -51.93 -0.34 0.65 16 32 H 0.05 0.84 8.14 -51.93 -0.42 0.42 16 33 H 0.07 1.27 6.32 -51.93 -0.33 0.94 16 34 H 0.42 8.23 6.70 -40.82 -0.27 7.95 16 35 H 0.23 2.12 8.06 -52.49 -0.42 1.70 16 36 H 0.14 1.45 8.14 -51.93 -0.42 1.03 16 37 H 0.09 0.70 7.81 -51.93 -0.41 0.30 16 38 H 0.08 0.59 8.14 -51.93 -0.42 0.16 16 39 H 0.09 0.54 8.14 -51.93 -0.42 0.12 16 40 H 0.07 0.43 8.14 -51.93 -0.42 0.01 16 41 H 0.08 0.67 8.14 -51.93 -0.42 0.25 16 42 H 0.09 0.73 8.09 -51.93 -0.42 0.31 16 43 H 0.05 0.70 8.14 -51.93 -0.42 0.27 16 44 H 0.06 1.00 6.50 -51.93 -0.34 0.66 16 45 H 0.05 0.76 8.14 -51.93 -0.42 0.34 16 46 H 0.06 1.02 8.14 -51.93 -0.42 0.60 16 47 H 0.02 0.35 8.14 -51.93 -0.42 -0.07 16 48 H 0.05 1.07 7.93 -51.93 -0.41 0.66 16 49 H 0.25 6.96 8.31 -40.82 -0.34 6.62 16 50 H 0.09 2.18 4.64 -51.93 -0.24 1.94 16 51 H 0.03 0.61 6.19 -51.92 -0.32 0.29 16 LS Contribution 401.31 15.07 6.05 6.05 Total: -1.00 -31.35 401.31 -9.19 -40.54 By element: Atomic # 1 Polarization: 17.22 SS G_CDS: -8.09 Total: 9.13 kcal Atomic # 6 Polarization: 3.03 SS G_CDS: -2.02 Total: 1.01 kcal Atomic # 7 Polarization: -60.20 SS G_CDS: -0.25 Total: -60.45 kcal Atomic # 8 Polarization: -12.89 SS G_CDS: 0.16 Total: -12.74 kcal Atomic # 14 Polarization: 21.49 SS G_CDS: -5.03 Total: 16.46 kcal Total LS contribution 6.05 Total: 6.05 kcal Total: -31.35 -9.19 -40.54 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001025592081.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 57.633 kcal (2) G-P(sol) polarization free energy of solvation -31.353 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 26.279 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.187 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.541 kcal (6) G-S(sol) free energy of system = (1) + (5) 17.092 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds