Wall clock time and date at job start Fri Apr 10 2020 14:02:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17401 * 1 3 3 C 1.47201 * 179.97438 * 2 1 4 4 N 1.46499 * 109.47181 * 323.90408 * 3 2 1 5 5 C 1.36940 * 120.00084 * 264.64389 * 4 3 2 6 6 H 1.07992 * 120.00279 * 196.37406 * 5 4 3 7 7 C 1.38811 * 119.99494 * 16.37556 * 5 4 3 8 8 N 1.31623 * 120.00381 * 22.67680 * 7 5 4 9 9 Si 1.86804 * 119.99857 * 202.67365 * 7 5 4 10 10 H 1.48504 * 109.46883 * 0.02562 * 9 7 5 11 11 H 1.48499 * 109.47418 * 120.00189 * 9 7 5 12 12 H 1.48494 * 109.47035 * 240.00294 * 9 7 5 13 13 C 1.46503 * 120.00301 * 84.64921 * 4 3 2 14 14 C 1.50700 * 109.46859 * 269.99956 * 13 4 3 15 15 C 1.38285 * 119.96425 * 89.99454 * 14 13 4 16 16 C 1.38244 * 120.11888 * 180.02562 * 15 14 13 17 17 C 1.38253 * 120.04310 * 0.02562 * 16 15 14 18 18 Cl 1.73603 * 120.03672 * 179.97438 * 17 16 15 19 19 C 1.38814 * 119.92720 * 359.97438 * 17 16 15 20 20 O 1.35923 * 120.06373 * 180.02562 * 19 17 16 21 21 C 1.42894 * 117.00179 * 180.02562 * 20 19 17 22 22 C 1.38154 * 119.95996 * 270.29628 * 14 13 4 23 23 H 4.40639 * 5.51325 * 179.97438 * 4 1 2 24 24 H 1.08992 * 109.47038 * 203.90231 * 3 2 1 25 25 H 1.08999 * 109.46799 * 83.90463 * 3 2 1 26 26 H 0.96995 * 119.99927 * 179.97438 * 8 7 5 27 27 H 1.08991 * 109.47423 * 149.99978 * 13 4 3 28 28 H 1.08997 * 109.46858 * 29.99285 * 13 4 3 29 29 H 1.07996 * 119.93634 * 0.02562 * 15 14 13 30 30 H 1.07995 * 119.97699 * 179.97438 * 16 15 14 31 31 H 1.09003 * 109.47242 * 300.00163 * 21 20 19 32 32 H 1.09003 * 109.47692 * 180.02562 * 21 20 19 33 33 H 1.09004 * 109.47689 * 60.00014 * 21 20 19 34 34 H 1.07994 * 120.02367 * 0.02562 * 22 14 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 7 3.1349 -1.1152 0.8137 5 6 3.4674 -0.9112 2.1264 6 1 4.0659 -1.6408 2.6515 7 6 3.0351 0.2334 2.7820 8 7 1.9807 0.8861 2.3407 9 14 3.9496 0.8473 4.2908 10 1 5.0915 -0.0572 4.5794 11 1 4.4574 2.2196 4.0375 12 1 3.0272 0.8677 5.4543 13 6 3.2681 -2.4493 0.2232 14 6 1.9802 -3.2102 0.4056 15 6 0.9912 -3.1351 -0.5580 16 6 -0.1917 -3.8315 -0.3936 17 6 -0.3887 -4.6045 0.7355 18 17 -1.8745 -5.4783 0.9420 19 6 0.6028 -4.6812 1.7039 20 8 0.4123 -5.4408 2.8149 21 6 1.4752 -5.4723 3.7694 22 6 1.7864 -3.9771 1.5383 23 1 -1.0498 -0.0001 0.0003 24 1 3.0089 0.9403 0.4164 25 1 3.0093 -0.1083 -1.0219 26 1 1.6785 1.6857 2.7991 27 1 4.0796 -2.9851 0.7154 28 1 3.4871 -2.3555 -0.8404 29 1 1.1432 -2.5314 -1.4404 30 1 -0.9627 -3.7709 -1.1474 31 1 2.3760 -5.8647 3.2973 32 1 1.1945 -6.1137 4.6049 33 1 1.6664 -4.4630 4.1340 34 1 2.5572 -4.0309 2.2928 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000491695143.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 14:02:15 Heat of formation + Delta-G solvation = 66.153016 kcal Electronic energy + Delta-G solvation = -19557.363573 eV Core-core repulsion = 16484.345338 eV Total energy + Delta-G solvation = -3073.018235 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 279.077 amu Computer time = 0.40 seconds Orbital eigenvalues (eV) -39.76526 -37.45876 -36.27305 -35.55049 -32.03097 -31.59411 -29.98457 -29.70822 -27.24835 -26.23011 -25.49085 -22.25753 -21.84938 -20.56539 -17.65320 -17.31955 -16.45163 -16.06851 -15.72070 -15.48342 -15.01599 -14.01894 -13.81062 -13.79535 -13.42447 -13.26259 -12.78939 -12.61898 -11.81611 -11.73086 -11.54943 -11.32393 -11.14809 -10.92909 -10.80584 -10.68372 -10.57957 -10.42881 -10.31028 -10.00493 -8.93783 -8.85764 -8.46987 -8.26654 -7.65097 -7.13414 -5.89214 -3.27956 1.67748 1.86454 2.60203 3.29508 3.38267 3.39861 3.53518 4.05510 4.27816 4.38637 4.49273 5.16395 5.20960 5.29348 5.40610 5.52388 5.56060 5.64128 5.73485 5.75850 5.85926 5.97671 6.06844 6.30217 6.45550 6.56384 6.64153 6.74385 7.11133 7.16283 7.21208 7.41703 7.64473 7.66053 8.16136 8.99245 9.21466 9.64716 10.10179 11.13241 Molecular weight = 279.08amu Principal moments of inertia in cm(-1) A = 0.017937 B = 0.006478 C = 0.005588 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1560.657236 B = 4321.369692 C = 5009.502290 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.292 4.292 2 C -0.098 4.098 3 C 0.266 3.734 4 N -0.572 5.572 5 C -0.265 4.265 6 H 0.076 0.924 7 C 0.006 3.994 8 N -0.879 5.879 9 Si 0.900 3.100 10 H -0.277 1.277 11 H -0.287 1.287 12 H -0.292 1.292 13 C 0.174 3.826 14 C -0.038 4.038 15 C -0.127 4.127 16 C -0.078 4.078 17 C -0.082 4.082 18 Cl -0.082 7.082 19 C 0.130 3.870 20 O -0.313 6.313 21 C 0.028 3.972 22 C -0.177 4.177 23 H 0.187 0.813 24 H 0.097 0.903 25 H 0.038 0.962 26 H 0.255 0.745 27 H 0.060 0.940 28 H 0.055 0.945 29 H 0.122 0.878 30 H 0.128 0.872 31 H 0.053 0.947 32 H 0.095 0.905 33 H 0.060 0.940 34 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.542 -9.317 -3.892 10.112 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.311 4.311 2 C -0.101 4.101 3 C 0.141 3.859 4 N -0.290 5.290 5 C -0.393 4.393 6 H 0.094 0.906 7 C -0.195 4.195 8 N -0.521 5.521 9 Si 0.729 3.271 10 H -0.202 1.202 11 H -0.214 1.214 12 H -0.219 1.219 13 C 0.047 3.953 14 C -0.043 4.043 15 C -0.147 4.147 16 C -0.097 4.097 17 C -0.110 4.110 18 Cl -0.054 7.054 19 C 0.084 3.916 20 O -0.227 6.227 21 C -0.067 4.067 22 C -0.197 4.197 23 H 0.204 0.796 24 H 0.115 0.885 25 H 0.056 0.944 26 H 0.066 0.934 27 H 0.079 0.921 28 H 0.074 0.926 29 H 0.140 0.860 30 H 0.145 0.855 31 H 0.072 0.928 32 H 0.113 0.887 33 H 0.079 0.921 34 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges -0.817 -9.314 -3.722 10.063 hybrid contribution -0.210 0.504 1.297 1.407 sum -1.026 -8.810 -2.425 9.195 Atomic orbital electron populations 1.24095 0.95237 1.04654 1.07113 1.24103 0.95105 0.96459 0.94442 1.17886 0.83043 0.93124 0.91805 1.44478 1.73661 1.01313 1.09565 1.19244 1.26313 1.05765 0.88022 0.90591 1.24950 0.96295 1.00034 0.98178 1.70158 1.21034 1.19555 1.41361 0.86277 0.79465 0.78875 0.82467 1.20222 1.21375 1.21889 1.20116 0.91539 0.86140 0.97458 1.21012 0.99663 0.91446 0.92139 1.20772 0.93192 1.00391 1.00306 1.20704 0.97867 0.95732 0.95374 1.19935 0.88482 1.04839 0.97710 1.98305 1.33790 1.75785 1.97493 1.18651 0.93377 0.92854 0.86728 1.86067 1.42668 1.64791 1.29146 1.23036 0.89858 1.02707 0.91131 1.20996 0.96937 1.01334 1.00418 0.79622 0.88517 0.94387 0.93430 0.92138 0.92644 0.86004 0.85455 0.92797 0.88658 0.92145 0.85157 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.29 -6.55 19.02 29.55 0.56 -5.99 16 2 C -0.10 -2.28 10.29 -37.12 -0.38 -2.67 16 3 C 0.27 5.96 5.45 -6.83 -0.04 5.92 16 4 N -0.57 -12.97 2.49 -177.96 -0.44 -13.42 16 5 C -0.26 -6.63 9.66 -15.06 -0.15 -6.78 16 6 H 0.08 1.86 7.91 -52.49 -0.41 1.45 16 7 C 0.01 0.15 4.84 -17.43 -0.08 0.06 16 8 N -0.88 -24.11 9.49 55.49 0.53 -23.59 16 9 Si 0.90 20.66 29.61 -169.99 -5.03 15.63 16 10 H -0.28 -6.19 7.11 56.52 0.40 -5.79 16 11 H -0.29 -6.65 7.11 56.52 0.40 -6.25 16 12 H -0.29 -6.93 7.11 56.52 0.40 -6.52 16 13 C 0.17 3.26 5.82 -5.19 -0.03 3.23 16 14 C -0.04 -0.72 5.22 -104.64 -0.55 -1.27 16 15 C -0.13 -2.25 8.40 -39.56 -0.33 -2.58 16 16 C -0.08 -1.32 9.83 -39.57 -0.39 -1.71 16 17 C -0.08 -1.47 6.33 -39.36 -0.25 -1.72 16 18 Cl -0.08 -1.33 28.50 -51.86 -1.48 -2.81 16 19 C 0.13 2.39 6.68 -39.19 -0.26 2.13 16 20 O -0.31 -5.36 9.96 -19.50 -0.19 -5.55 16 21 C 0.03 0.37 9.81 101.05 0.99 1.36 16 22 C -0.18 -3.30 8.69 -39.44 -0.34 -3.64 16 23 H 0.19 3.67 7.80 -54.10 -0.42 3.24 16 24 H 0.10 2.38 6.43 -51.93 -0.33 2.04 16 25 H 0.04 0.73 7.97 -51.93 -0.41 0.32 16 26 H 0.26 6.93 8.31 -40.82 -0.34 6.59 16 27 H 0.06 1.07 7.97 -51.93 -0.41 0.66 16 28 H 0.06 0.91 7.89 -51.93 -0.41 0.50 16 29 H 0.12 2.02 8.06 -52.49 -0.42 1.60 16 30 H 0.13 1.86 8.06 -52.49 -0.42 1.43 16 31 H 0.05 0.64 7.67 -51.93 -0.40 0.24 16 32 H 0.10 0.99 8.14 -51.93 -0.42 0.57 16 33 H 0.06 0.86 7.65 -51.93 -0.40 0.46 16 34 H 0.13 2.32 6.30 -52.49 -0.33 1.99 16 LS Contribution 311.58 15.07 4.70 4.70 Total: -1.00 -29.04 311.58 -7.11 -36.15 By element: Atomic # 1 Polarization: 6.48 SS G_CDS: -3.94 Total: 2.54 kcal Atomic # 6 Polarization: -12.40 SS G_CDS: -1.25 Total: -13.65 kcal Atomic # 7 Polarization: -37.09 SS G_CDS: 0.08 Total: -37.00 kcal Atomic # 8 Polarization: -5.36 SS G_CDS: -0.19 Total: -5.55 kcal Atomic # 14 Polarization: 20.66 SS G_CDS: -5.03 Total: 15.63 kcal Atomic # 17 Polarization: -1.33 SS G_CDS: -1.48 Total: -2.81 kcal Total LS contribution 4.70 Total: 4.70 kcal Total: -29.04 -7.11 -36.15 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000491695143.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 102.304 kcal (2) G-P(sol) polarization free energy of solvation -29.040 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 73.264 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.111 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.151 kcal (6) G-S(sol) free energy of system = (1) + (5) 66.153 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.40 seconds