Wall clock time and date at job start Fri Apr 10 2020 14:02:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17396 * 1 3 3 C 1.47199 * 179.97438 * 2 1 4 4 N 1.46506 * 109.46863 * 188.54928 * 3 2 1 5 5 C 1.36942 * 119.99606 * 95.58000 * 4 3 2 6 6 H 1.08003 * 119.99791 * 149.23726 * 5 4 3 7 7 C 1.38809 * 119.99953 * 328.95937 * 5 4 3 8 8 N 1.31624 * 120.00127 * 341.34653 * 7 5 4 9 9 Si 1.86796 * 119.99845 * 161.34837 * 7 5 4 10 10 H 1.48504 * 109.46977 * 59.99951 * 9 7 5 11 11 H 1.48501 * 109.47133 * 179.97438 * 9 7 5 12 12 H 1.48499 * 109.47483 * 300.00025 * 9 7 5 13 13 C 1.46494 * 120.00239 * 275.57846 * 4 3 2 14 14 C 1.50705 * 109.47257 * 264.68270 * 13 4 3 15 15 C 1.38291 * 119.97558 * 3.11741 * 14 13 4 16 16 C 1.38237 * 120.11506 * 179.72563 * 15 14 13 17 17 C 1.38193 * 120.07579 * 0.55237 * 16 15 14 18 18 C 1.38660 * 119.95847 * 359.72460 * 17 16 15 19 19 O 1.35931 * 120.05996 * 180.02562 * 18 17 16 20 20 C 1.42891 * 116.99915 * 359.97438 * 19 18 17 21 21 C 1.38214 * 119.97723 * 183.39457 * 14 13 4 22 22 Cl 1.73592 * 120.03929 * 359.97438 * 21 14 13 23 23 H 4.40642 * 5.51452 * 179.97438 * 4 1 2 24 24 H 1.08998 * 109.47505 * 68.55107 * 3 2 1 25 25 H 1.08993 * 109.47125 * 308.54993 * 3 2 1 26 26 H 0.96993 * 119.99700 * 179.97438 * 8 7 5 27 27 H 1.09005 * 109.47137 * 24.67993 * 13 4 3 28 28 H 1.09004 * 109.47246 * 144.68105 * 13 4 3 29 29 H 1.07994 * 119.94054 * 0.02562 * 15 14 13 30 30 H 1.08003 * 119.95884 * 180.27170 * 16 15 14 31 31 H 1.08001 * 120.01733 * 179.74443 * 17 16 15 32 32 H 1.08997 * 109.47632 * 59.99853 * 20 19 18 33 33 H 1.09002 * 109.47415 * 180.02562 * 20 19 18 34 34 H 1.09007 * 109.46966 * 299.99895 * 20 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6459 0.0007 0.0000 4 7 3.1336 1.3668 0.2053 5 6 3.4703 1.7918 1.4629 6 1 4.2469 2.5310 1.5931 7 6 2.8096 1.2768 2.5696 8 7 1.6452 0.6809 2.4226 9 14 3.5728 1.4296 4.2677 10 1 3.7614 2.8651 4.5982 11 1 2.6749 0.8048 5.2720 12 1 4.8884 0.7411 4.2829 13 6 3.2611 2.2782 -0.9345 14 6 4.6765 2.2422 -1.4507 15 6 5.5963 1.3778 -0.8855 16 6 6.8939 1.3384 -1.3605 17 6 7.2786 2.1710 -2.3942 18 6 6.3605 3.0430 -2.9593 19 8 6.7365 3.8625 -3.9765 20 6 8.0941 3.7732 -4.4134 21 6 5.0560 3.0771 -2.4847 22 17 3.9029 4.1667 -3.1896 23 1 -1.0503 -0.0004 -0.0003 24 1 3.0095 -0.3750 -0.9565 25 1 3.0095 -0.6396 0.8036 26 1 1.1837 0.3207 3.1960 27 1 2.5779 1.9685 -1.7255 28 1 3.0153 3.2920 -0.6184 29 1 5.2990 0.7291 -0.0750 30 1 7.6090 0.6592 -0.9202 31 1 8.2938 2.1423 -2.7618 32 1 8.2977 2.7609 -4.7624 33 1 8.2611 4.4790 -5.2271 34 1 8.7593 4.0121 -3.5835 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000852010576.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 14:02:23 Heat of formation + Delta-G solvation = 66.508375 kcal Electronic energy + Delta-G solvation = -19159.950588 eV Core-core repulsion = 16086.947763 eV Total energy + Delta-G solvation = -3073.002825 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 279.077 amu Computer time = 1.29 seconds Orbital eigenvalues (eV) -39.94783 -37.72275 -36.01259 -35.66526 -32.04692 -31.52601 -30.36474 -29.46308 -27.32971 -26.22929 -25.57392 -22.34575 -22.05100 -20.37918 -17.71815 -17.38713 -16.33086 -16.13942 -15.90673 -15.72747 -14.77241 -14.19482 -13.87872 -13.84608 -13.51274 -13.21061 -12.93947 -12.71145 -11.81228 -11.70923 -11.53726 -11.33770 -11.15473 -11.07526 -10.85028 -10.81348 -10.66819 -10.31497 -10.27266 -10.07951 -8.92485 -8.64845 -8.51646 -8.23853 -7.84736 -6.90948 -5.77808 -3.37626 1.51580 1.73084 2.60017 3.30975 3.35845 3.42344 3.43073 4.02009 4.21027 4.42536 4.52308 4.91735 5.04141 5.08852 5.24671 5.33460 5.38705 5.49445 5.63506 5.73448 5.86570 5.95930 6.12258 6.34244 6.39833 6.54053 6.71469 6.82642 7.01002 7.08444 7.13048 7.41876 7.48944 7.78569 8.33564 9.07585 9.26780 9.71166 10.23437 11.20461 Molecular weight = 279.08amu Principal moments of inertia in cm(-1) A = 0.020253 B = 0.005550 C = 0.004917 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1382.201576 B = 5043.535509 C = 5693.173293 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.289 4.289 2 C -0.101 4.101 3 C 0.269 3.731 4 N -0.577 5.577 5 C -0.279 4.279 6 H 0.070 0.930 7 C 0.017 3.983 8 N -0.874 5.874 9 Si 0.898 3.102 10 H -0.282 1.282 11 H -0.291 1.291 12 H -0.282 1.282 13 C 0.178 3.822 14 C -0.041 4.041 15 C -0.115 4.115 16 C -0.086 4.086 17 C -0.215 4.215 18 C 0.124 3.876 19 O -0.311 6.311 20 C 0.029 3.971 21 C -0.073 4.073 22 Cl -0.069 7.069 23 H 0.188 0.812 24 H 0.041 0.959 25 H 0.080 0.920 26 H 0.255 0.745 27 H 0.062 0.938 28 H 0.070 0.930 29 H 0.153 0.847 30 H 0.123 0.877 31 H 0.126 0.874 32 H 0.053 0.947 33 H 0.096 0.904 34 H 0.053 0.947 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 10.219 1.742 -10.937 15.070 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.309 4.309 2 C -0.104 4.104 3 C 0.143 3.857 4 N -0.296 5.296 5 C -0.408 4.408 6 H 0.088 0.912 7 C -0.185 4.185 8 N -0.514 5.514 9 Si 0.728 3.272 10 H -0.208 1.208 11 H -0.217 1.217 12 H -0.208 1.208 13 C 0.050 3.950 14 C -0.044 4.044 15 C -0.133 4.133 16 C -0.104 4.104 17 C -0.234 4.234 18 C 0.078 3.922 19 O -0.224 6.224 20 C -0.066 4.066 21 C -0.100 4.100 22 Cl -0.040 7.040 23 H 0.206 0.794 24 H 0.059 0.941 25 H 0.098 0.902 26 H 0.066 0.934 27 H 0.080 0.920 28 H 0.088 0.912 29 H 0.170 0.830 30 H 0.141 0.859 31 H 0.144 0.856 32 H 0.072 0.928 33 H 0.115 0.885 34 H 0.072 0.928 Dipole moment (debyes) X Y Z Total from point charges 9.896 1.911 -10.945 14.878 hybrid contribution 0.231 0.173 1.066 1.104 sum 10.127 2.083 -9.879 14.300 Atomic orbital electron populations 1.24099 0.95254 1.03733 1.07792 1.24048 0.95206 0.97002 0.94175 1.17648 0.83312 0.86931 0.97767 1.43883 1.75017 1.07440 1.03272 1.19026 1.14753 1.25129 0.81853 0.91197 1.25214 0.94723 1.00430 0.98145 1.70105 1.11803 1.40287 1.29243 0.86457 0.78628 0.77948 0.84207 1.20821 1.21734 1.20819 1.19825 0.88571 0.95889 0.90678 1.21066 1.00327 0.91871 0.91171 1.21318 0.91594 0.99697 1.00692 1.21081 0.96673 0.97529 0.95139 1.21020 0.99107 1.01182 1.02128 1.18596 0.92197 0.91913 0.89509 1.86123 1.29327 1.58358 1.48641 1.23000 0.81412 1.02321 0.99857 1.20030 0.88580 1.00333 1.01106 1.98324 1.59239 1.63015 1.83451 0.79436 0.94105 0.90204 0.93410 0.91992 0.91177 0.82960 0.85870 0.85637 0.92843 0.88538 0.92835 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.29 -6.62 19.07 29.55 0.56 -6.06 16 2 C -0.10 -2.43 11.10 -37.12 -0.41 -2.84 16 3 C 0.27 6.05 5.14 -6.83 -0.04 6.01 16 4 N -0.58 -13.41 1.29 -177.95 -0.23 -13.64 16 5 C -0.28 -7.12 8.63 -15.06 -0.13 -7.25 16 6 H 0.07 1.80 7.90 -52.48 -0.41 1.38 16 7 C 0.02 0.44 4.88 -17.43 -0.09 0.35 16 8 N -0.87 -24.20 9.74 55.49 0.54 -23.66 16 9 Si 0.90 20.89 29.59 -169.99 -5.03 15.86 16 10 H -0.28 -6.61 7.11 56.52 0.40 -6.20 16 11 H -0.29 -6.92 7.11 56.52 0.40 -6.52 16 12 H -0.28 -6.44 7.11 56.52 0.40 -6.04 16 13 C 0.18 3.67 5.08 -5.19 -0.03 3.64 16 14 C -0.04 -0.75 5.86 -104.61 -0.61 -1.37 16 15 C -0.11 -2.01 9.12 -39.56 -0.36 -2.37 16 16 C -0.09 -1.26 10.04 -39.60 -0.40 -1.66 16 17 C -0.22 -2.98 9.04 -39.44 -0.36 -3.34 16 18 C 0.12 1.93 6.68 -39.20 -0.26 1.67 16 19 O -0.31 -4.40 9.96 -19.52 -0.19 -4.60 16 20 C 0.03 0.27 9.81 101.05 0.99 1.26 16 21 C -0.07 -1.27 6.33 -39.36 -0.25 -1.52 16 22 Cl -0.07 -1.15 27.48 -51.86 -1.42 -2.58 16 23 H 0.19 3.65 7.80 -54.08 -0.42 3.23 16 24 H 0.04 0.81 8.11 -51.93 -0.42 0.39 16 25 H 0.08 1.90 7.33 -51.93 -0.38 1.52 16 26 H 0.26 7.02 8.31 -40.82 -0.34 6.68 16 27 H 0.06 1.26 8.03 -51.93 -0.42 0.84 16 28 H 0.07 1.53 8.00 -51.93 -0.42 1.12 16 29 H 0.15 2.90 6.21 -52.49 -0.33 2.57 16 30 H 0.12 1.48 8.06 -52.48 -0.42 1.06 16 31 H 0.13 1.36 6.30 -52.49 -0.33 1.02 16 32 H 0.05 0.43 7.66 -51.93 -0.40 0.03 16 33 H 0.10 0.67 8.14 -51.93 -0.42 0.25 16 34 H 0.05 0.44 7.66 -51.92 -0.40 0.05 16 LS Contribution 309.69 15.07 4.67 4.67 Total: -1.00 -29.06 309.69 -6.95 -36.01 By element: Atomic # 1 Polarization: 5.29 SS G_CDS: -3.90 Total: 1.39 kcal Atomic # 6 Polarization: -12.08 SS G_CDS: -1.37 Total: -13.45 kcal Atomic # 7 Polarization: -37.61 SS G_CDS: 0.31 Total: -37.30 kcal Atomic # 8 Polarization: -4.40 SS G_CDS: -0.19 Total: -4.60 kcal Atomic # 14 Polarization: 20.89 SS G_CDS: -5.03 Total: 15.86 kcal Atomic # 17 Polarization: -1.15 SS G_CDS: -1.42 Total: -2.58 kcal Total LS contribution 4.67 Total: 4.67 kcal Total: -29.06 -6.95 -36.01 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000852010576.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 102.514 kcal (2) G-P(sol) polarization free energy of solvation -29.057 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 73.457 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.948 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.005 kcal (6) G-S(sol) free energy of system = (1) + (5) 66.508 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.29 seconds