Wall clock time and date at job start Fri Apr 10 2020 13:59:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13596 * 1 3 3 C 1.47200 * 179.97438 * 2 1 4 4 O 1.45205 * 109.47033 * 198.53814 * 3 2 1 5 5 C 1.34222 * 117.00095 * 179.97438 * 4 3 2 6 6 O 1.20827 * 120.00267 * 0.02562 * 5 4 3 7 7 C 1.50700 * 119.99927 * 179.97438 * 5 4 3 8 8 H 1.09002 * 109.64052 * 334.45922 * 7 5 4 9 9 C 1.53027 * 109.63954 * 214.04694 * 7 5 4 10 10 C 1.50064 * 110.14599 * 289.74853 * 9 7 5 11 11 C 1.29446 * 124.07829 * 342.87355 * 10 9 7 12 12 C 1.50063 * 124.07323 * 0.44270 * 11 10 9 13 13 C 1.53011 * 110.15614 * 342.90961 * 12 11 10 14 14 H 1.09004 * 109.62650 * 289.72395 * 13 12 11 15 15 C 1.50704 * 109.64976 * 169.10194 * 13 12 11 16 16 O 1.21211 * 119.99690 * 241.03947 * 15 13 12 17 17 O 1.34302 * 119.99895 * 61.03321 * 15 13 12 18 18 C 1.34927 * 116.99764 * 179.97438 * 17 15 13 19 19 H 1.08001 * 120.00238 * 0.02562 * 18 17 15 20 20 C 1.38758 * 119.99895 * 180.02562 * 18 17 15 21 21 N 1.31437 * 119.99848 * 0.02562 * 20 18 17 22 22 Si 1.86802 * 119.99788 * 180.02562 * 20 18 17 23 23 H 1.48497 * 109.47006 * 59.99805 * 22 20 18 24 24 H 1.48502 * 109.46685 * 180.02562 * 22 20 18 25 25 H 1.48502 * 109.46820 * 299.99904 * 22 20 18 26 26 H 1.09002 * 109.47200 * 78.54073 * 3 2 1 27 27 H 1.08996 * 109.47103 * 318.53639 * 3 2 1 28 28 H 1.09002 * 109.35958 * 49.95814 * 9 7 5 29 29 H 1.09003 * 109.35756 * 169.68367 * 9 7 5 30 30 H 1.08006 * 117.96078 * 162.84948 * 10 9 7 31 31 H 1.07998 * 117.96660 * 180.46969 * 11 10 9 32 32 H 1.09008 * 109.35784 * 103.09902 * 12 11 10 33 33 H 1.08999 * 109.36022 * 222.68625 * 12 11 10 34 34 H 0.97006 * 120.00244 * 179.97438 * 21 20 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 8 3.0914 1.2989 0.4353 5 6 4.4219 1.4661 0.4917 6 8 5.1585 0.5579 0.1870 7 6 4.9973 2.7868 0.9339 8 1 4.2812 3.5839 0.7337 9 6 6.2977 3.0612 0.1753 10 6 7.3740 2.1238 0.6387 11 6 7.3220 1.4481 1.7416 12 6 6.1737 1.5004 2.7062 13 6 5.3124 2.7355 2.4342 14 1 5.8578 3.6334 2.7250 15 6 4.0290 2.6411 3.2185 16 8 2.9649 2.6169 2.6386 17 8 4.0644 2.5838 4.5598 18 6 2.8800 2.5008 5.2008 19 1 1.9600 2.4828 4.6353 20 6 2.8439 2.4387 6.5865 21 7 3.9635 2.4612 7.2747 22 14 1.2042 2.3232 7.4738 23 1 0.4926 1.0938 7.0409 24 1 1.4372 2.2708 8.9395 25 1 0.3793 3.5138 7.1464 26 1 2.9714 -0.2033 -1.0072 27 1 2.9716 -0.7693 0.6804 28 1 6.1300 2.9194 -0.8923 29 1 6.6128 4.0886 0.3582 30 1 8.2463 2.0053 0.0129 31 1 8.1570 0.8071 1.9827 32 1 5.5647 0.6035 2.5921 33 1 6.5592 1.5458 3.7247 34 1 3.9383 2.4181 8.2435 RHF calculation, no. of doubly occupied orbitals= 51 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000754255146.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 13:59:44 Heat of formation + Delta-G solvation = -113.465155 kcal Electronic energy + Delta-G solvation = -22066.554675 eV Core-core repulsion = 18545.038447 eV Total energy + Delta-G solvation = -3521.516228 eV No. of doubly occupied orbitals = 51 Molecular weight (most abundant/longest-lived isotopes) = 279.098 amu Computer time = 0.43 seconds Orbital eigenvalues (eV) -41.03649 -39.15011 -37.88693 -36.57156 -35.78582 -35.07892 -32.18824 -31.45265 -30.94203 -29.00572 -25.71036 -24.20070 -23.62591 -21.15265 -19.80119 -18.63943 -18.17935 -17.72754 -17.02409 -16.68472 -16.59468 -15.64065 -15.11535 -14.70427 -14.45678 -14.24974 -14.04231 -13.47839 -13.27653 -13.15476 -12.96469 -12.66911 -12.40359 -12.22808 -12.13882 -12.03989 -11.67756 -11.59477 -11.14052 -10.72482 -10.62907 -10.46323 -10.43262 -10.33370 -10.07685 -9.79127 -8.96598 -8.73535 -8.58454 -6.42643 -4.10037 2.01459 2.31548 2.54991 2.69129 3.11359 3.18433 3.21961 3.31320 3.48463 3.86058 3.88480 4.35429 4.66945 4.75694 4.93048 4.97393 5.08307 5.10901 5.26405 5.36027 5.41063 5.59232 5.60883 5.69635 5.78297 6.16165 6.20176 6.27349 6.45545 6.70163 6.78907 7.14987 7.38363 7.41280 7.90272 7.93888 8.68657 9.06573 9.82760 10.75047 Molecular weight = 279.10amu Principal moments of inertia in cm(-1) A = 0.014123 B = 0.006803 C = 0.004935 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1982.134027 B = 4115.111577 C = 5671.882261 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.401 5.401 2 C 0.216 3.784 3 C 0.162 3.838 4 O -0.319 6.319 5 C 0.484 3.516 6 O -0.501 6.501 7 C -0.064 4.064 8 H 0.115 0.885 9 C -0.072 4.072 10 C -0.158 4.158 11 C -0.130 4.130 12 C -0.087 4.087 13 C -0.061 4.061 14 H 0.116 0.884 15 C 0.389 3.611 16 O -0.536 6.536 17 O -0.210 6.210 18 C -0.381 4.381 19 H 0.095 0.905 20 C 0.044 3.956 21 N -0.865 5.865 22 Si 0.940 3.060 23 H -0.270 1.270 24 H -0.278 1.278 25 H -0.270 1.270 26 H 0.113 0.887 27 H 0.114 0.886 28 H 0.078 0.922 29 H 0.090 0.910 30 H 0.104 0.896 31 H 0.105 0.895 32 H 0.076 0.924 33 H 0.093 0.907 34 H 0.270 0.730 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.882 -1.208 -12.780 14.565 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.081 5.081 2 C -0.103 4.103 3 C 0.085 3.915 4 O -0.233 6.233 5 C 0.326 3.674 6 O -0.388 6.388 7 C -0.083 4.083 8 H 0.133 0.867 9 C -0.109 4.109 10 C -0.176 4.176 11 C -0.148 4.148 12 C -0.124 4.124 13 C -0.080 4.080 14 H 0.134 0.866 15 C 0.234 3.766 16 O -0.432 6.432 17 O -0.117 6.117 18 C -0.457 4.457 19 H 0.113 0.887 20 C -0.160 4.160 21 N -0.501 5.501 22 Si 0.765 3.235 23 H -0.195 1.195 24 H -0.203 1.203 25 H -0.195 1.195 26 H 0.131 0.869 27 H 0.132 0.868 28 H 0.097 0.903 29 H 0.109 0.891 30 H 0.122 0.878 31 H 0.123 0.877 32 H 0.094 0.906 33 H 0.111 0.889 34 H 0.080 0.920 Dipole moment (debyes) X Y Z Total from point charges 5.207 -1.517 -12.773 13.877 hybrid contribution -0.318 -0.225 0.540 0.666 sum 4.889 -1.742 -12.233 13.288 Atomic orbital electron populations 1.81194 1.12441 1.05996 1.08441 1.28312 0.94242 0.94384 0.93341 1.19878 0.81800 0.86574 1.03257 1.86789 1.25244 1.33286 1.78025 1.23470 0.79696 0.90747 0.73448 1.90667 1.60016 1.42967 1.45169 1.20961 0.97963 0.93726 0.95692 0.86686 1.20390 0.91198 0.99795 0.99488 1.21727 0.99005 0.99582 0.97317 1.21878 0.98217 0.99065 0.95659 1.20482 0.95139 0.96627 1.00179 1.20779 0.94429 1.02190 0.90649 0.86623 1.22955 0.90151 0.79712 0.83745 1.90656 1.31699 1.50089 1.70758 1.83861 1.35714 1.75140 1.16959 1.21163 0.83458 1.52132 0.88991 0.88743 1.25295 0.99098 0.96219 0.95431 1.69974 1.26336 1.46411 1.07422 0.85792 0.80360 0.79398 0.77949 1.19539 1.20347 1.19475 0.86897 0.86825 0.90330 0.89137 0.87817 0.87726 0.90577 0.88852 0.92036 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.40 -6.81 18.54 42.15 0.78 -6.03 16 2 C 0.22 3.14 15.83 -20.76 -0.33 2.81 16 3 C 0.16 1.97 5.94 34.37 0.20 2.17 16 4 O -0.32 -5.12 8.43 -46.18 -0.39 -5.51 16 5 C 0.48 7.43 5.47 36.01 0.20 7.62 16 6 O -0.50 -7.72 13.41 -18.75 -0.25 -7.97 16 7 C -0.06 -0.91 2.28 -91.56 -0.21 -1.12 16 8 H 0.12 1.60 7.91 -51.93 -0.41 1.19 16 9 C -0.07 -0.78 5.41 -28.18 -0.15 -0.93 16 10 C -0.16 -1.84 8.75 -35.90 -0.31 -2.16 16 11 C -0.13 -1.71 8.89 -35.90 -0.32 -2.03 16 12 C -0.09 -1.40 4.75 -28.19 -0.13 -1.53 16 13 C -0.06 -1.03 2.48 -91.56 -0.23 -1.25 16 14 H 0.12 1.73 8.12 -51.93 -0.42 1.31 16 15 C 0.39 8.91 6.95 36.01 0.25 9.16 16 16 O -0.54 -13.20 13.06 -26.01 -0.34 -13.54 16 17 O -0.21 -5.73 9.69 -20.70 -0.20 -5.93 16 18 C -0.38 -11.01 9.65 30.92 0.30 -10.71 16 19 H 0.09 2.77 6.86 -52.49 -0.36 2.41 16 20 C 0.04 1.22 5.49 -17.53 -0.10 1.12 16 21 N -0.86 -24.86 13.67 55.48 0.76 -24.10 16 22 Si 0.94 21.32 29.55 -169.99 -5.02 16.29 16 23 H -0.27 -6.05 7.11 56.52 0.40 -5.65 16 24 H -0.28 -6.04 7.11 56.52 0.40 -5.64 16 25 H -0.27 -6.00 7.11 56.52 0.40 -5.60 16 26 H 0.11 0.97 8.13 -51.93 -0.42 0.54 16 27 H 0.11 1.26 8.13 -51.93 -0.42 0.83 16 28 H 0.08 0.75 8.11 -51.93 -0.42 0.33 16 29 H 0.09 0.79 8.14 -51.93 -0.42 0.37 16 30 H 0.10 1.02 8.06 -52.48 -0.42 0.60 16 31 H 0.10 1.23 8.06 -52.49 -0.42 0.80 16 32 H 0.08 1.34 6.99 -51.92 -0.36 0.98 16 33 H 0.09 1.56 8.14 -51.93 -0.42 1.13 16 34 H 0.27 7.16 8.31 -40.82 -0.34 6.82 16 LS Contribution 304.54 15.07 4.59 4.59 Total: -1.00 -34.07 304.54 -4.55 -38.63 By element: Atomic # 1 Polarization: 4.07 SS G_CDS: -3.65 Total: 0.42 kcal Atomic # 6 Polarization: 3.98 SS G_CDS: -0.83 Total: 3.15 kcal Atomic # 7 Polarization: -31.67 SS G_CDS: 1.54 Total: -30.13 kcal Atomic # 8 Polarization: -31.77 SS G_CDS: -1.18 Total: -32.95 kcal Atomic # 14 Polarization: 21.32 SS G_CDS: -5.02 Total: 16.29 kcal Total LS contribution 4.59 Total: 4.59 kcal Total: -34.07 -4.55 -38.63 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000754255146.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -74.837 kcal (2) G-P(sol) polarization free energy of solvation -34.074 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -108.911 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.554 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.628 kcal (6) G-S(sol) free energy of system = (1) + (5) -113.465 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.43 seconds