Wall clock time and date at job start Fri Apr 10 2020 14:01:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13598 * 1 3 3 C 1.47208 * 179.97438 * 2 1 4 4 C 1.52998 * 109.46812 * 239.88250 * 3 2 1 5 5 N 1.46498 * 109.46967 * 180.02562 * 4 3 2 6 6 C 1.46504 * 120.00119 * 88.47478 * 5 4 3 7 7 C 1.50709 * 109.46873 * 90.18158 * 6 5 4 8 8 H 1.07996 * 119.99560 * 0.02562 * 7 6 5 9 9 C 1.37872 * 119.99731 * 179.97438 * 7 6 5 10 10 N 1.31515 * 120.00294 * 0.02562 * 9 7 6 11 11 Si 1.86802 * 119.99656 * 179.97438 * 9 7 6 12 12 H 1.48490 * 109.47248 * 0.02562 * 11 9 7 13 13 H 1.48502 * 109.46839 * 120.00348 * 11 9 7 14 14 H 1.48504 * 109.47341 * 240.00054 * 11 9 7 15 15 C 1.34776 * 119.99881 * 268.47731 * 5 4 3 16 16 O 1.21693 * 120.00018 * 6.17920 * 15 5 4 17 17 C 1.46677 * 119.99957 * 186.17844 * 15 5 4 18 18 C 1.37896 * 126.22028 * 187.48120 * 17 15 5 19 19 C 1.39892 * 107.09022 * 179.88239 * 18 17 15 20 20 Cl 1.73604 * 126.07048 * 180.14529 * 19 18 17 21 21 C 1.35516 * 107.85113 * 0.38804 * 19 18 17 22 22 N 1.35632 * 108.85308 * 359.75650 * 21 19 18 23 23 H 0.97000 * 125.67153 * 180.02562 * 22 21 19 24 24 H 1.08998 * 109.46848 * 119.88042 * 3 2 1 25 25 H 1.09002 * 109.46793 * 359.87864 * 3 2 1 26 26 H 1.08998 * 109.47584 * 60.00243 * 4 3 2 27 27 H 1.09010 * 109.47112 * 299.99774 * 4 3 2 28 28 H 1.08996 * 109.47312 * 210.17995 * 6 5 4 29 29 H 1.08997 * 109.47023 * 330.18011 * 6 5 4 30 30 H 0.97004 * 119.99978 * 179.97438 * 10 9 7 31 31 H 1.07997 * 126.45346 * 0.02562 * 18 17 15 32 32 H 1.07997 * 125.57109 * 179.78806 * 21 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6081 0.0007 0.0000 4 6 3.1177 0.7247 1.2478 5 7 4.5826 0.7259 1.2475 6 6 5.3142 1.8067 0.5819 7 6 5.5685 2.9207 1.5647 8 1 5.2204 2.8320 2.5832 9 6 6.2464 4.0523 1.1637 10 7 6.6707 4.1599 -0.0765 11 14 6.5610 5.4332 2.3816 12 1 5.9862 5.0696 3.7016 13 1 8.0240 5.6464 2.5211 14 1 5.9235 6.6813 1.8905 15 6 5.2574 -0.2673 1.8595 16 8 4.6551 -1.2220 2.3142 17 6 6.7178 -0.1976 1.9776 18 6 7.5462 -1.1966 2.4436 19 6 8.8553 -0.7071 2.3824 20 17 10.2903 -1.5652 2.8494 21 6 8.8036 0.5579 1.8990 22 7 7.5097 0.8790 1.6491 23 1 7.1951 1.7264 1.2971 24 1 2.9711 0.5128 -0.8910 25 1 2.9718 -1.0269 0.0022 26 1 2.7546 0.2126 2.1388 27 1 2.7538 1.7523 1.2456 28 1 6.2654 1.4263 0.2098 29 1 4.7232 2.1857 -0.2519 30 1 7.1473 4.9562 -0.3587 31 1 7.2420 -2.1738 2.7884 32 1 9.6537 1.2043 1.7385 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000049377390.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 14:01:29 Heat of formation + Delta-G solvation = 36.324929 kcal Electronic energy + Delta-G solvation = -19402.349435 eV Core-core repulsion = 16197.185936 eV Total energy + Delta-G solvation = -3205.163499 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 281.067 amu Computer time = 1.23 seconds Orbital eigenvalues (eV) -41.01210 -38.79762 -36.69810 -36.04590 -35.55485 -33.39064 -31.58734 -30.19411 -28.67105 -27.65367 -24.44132 -23.55931 -21.24723 -20.17422 -19.49391 -17.66898 -17.20252 -16.82406 -15.96922 -15.44858 -14.83596 -14.69659 -14.51815 -13.86843 -13.84496 -13.25866 -13.06869 -12.88116 -12.71994 -12.46936 -12.37818 -12.27093 -11.77449 -11.59078 -11.40220 -11.30081 -11.01947 -10.79220 -10.54431 -10.45818 -10.15466 -9.56999 -9.04670 -8.41988 -8.18093 -7.76346 -6.65901 -4.80487 1.96127 2.62521 2.80319 2.90024 2.90321 2.96892 3.08447 3.12510 3.45584 3.81324 3.95645 4.06936 4.31511 4.65944 5.07966 5.24434 5.32639 5.52950 5.59706 5.71127 5.91929 6.10495 6.14280 6.21512 6.33083 6.66296 6.91512 7.02594 7.27050 7.31955 7.48553 7.65734 7.89781 8.07370 8.35608 8.65627 8.92304 10.36588 Molecular weight = 281.07amu Principal moments of inertia in cm(-1) A = 0.011036 B = 0.007048 C = 0.004575 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2536.511430 B = 3971.950541 C = 6119.087300 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.449 5.449 2 C 0.221 3.779 3 C -0.046 4.046 4 C 0.129 3.871 5 N -0.597 5.597 6 C 0.215 3.785 7 C -0.565 4.565 8 H 0.073 0.927 9 C 0.067 3.933 10 N -0.878 5.878 11 Si 0.899 3.101 12 H -0.267 1.267 13 H -0.277 1.277 14 H -0.277 1.277 15 C 0.591 3.409 16 O -0.553 6.553 17 C -0.028 4.028 18 C -0.118 4.118 19 C -0.136 4.136 20 Cl -0.069 7.069 21 C 0.027 3.973 22 N -0.501 5.501 23 H 0.455 0.545 24 H 0.112 0.888 25 H 0.112 0.888 26 H 0.085 0.915 27 H 0.090 0.910 28 H 0.042 0.958 29 H 0.052 0.948 30 H 0.274 0.726 31 H 0.148 0.852 32 H 0.170 0.830 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.900 -4.325 0.327 5.833 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.126 5.126 2 C -0.097 4.097 3 C -0.088 4.088 4 C 0.004 3.996 5 N -0.327 5.327 6 C 0.094 3.906 7 C -0.604 4.604 8 H 0.091 0.909 9 C -0.140 4.140 10 N -0.514 5.514 11 Si 0.725 3.275 12 H -0.192 1.192 13 H -0.203 1.203 14 H -0.202 1.202 15 C 0.381 3.619 16 O -0.432 6.432 17 C -0.144 4.144 18 C -0.144 4.144 19 C -0.169 4.169 20 Cl -0.041 7.041 21 C -0.115 4.115 22 N -0.111 5.111 23 H 0.315 0.685 24 H 0.130 0.870 25 H 0.130 0.870 26 H 0.103 0.897 27 H 0.109 0.891 28 H 0.060 0.940 29 H 0.070 0.930 30 H 0.084 0.916 31 H 0.166 0.834 32 H 0.188 0.812 Dipole moment (debyes) X Y Z Total from point charges 1.958 -4.521 0.350 4.939 hybrid contribution 0.849 1.293 0.367 1.590 sum 2.807 -3.228 0.717 4.337 Atomic orbital electron populations 1.81184 1.13054 1.09399 1.08979 1.29082 0.95090 0.92680 0.92875 1.19784 0.81382 1.05086 1.02518 1.21151 0.80658 1.01452 0.96348 1.48006 1.05662 1.24848 1.54177 1.19881 0.92744 0.84232 0.93743 1.21698 1.38464 1.02015 0.98195 0.90856 1.25095 0.94862 0.98296 0.95699 1.69923 1.36181 1.29468 1.15848 0.86383 0.78517 0.81418 0.81219 1.19155 1.20279 1.20233 1.17051 0.84982 0.82152 0.77719 1.90763 1.68810 1.33080 1.50551 1.20198 0.91344 0.90069 1.12818 1.20943 0.89679 0.99450 1.04376 1.19868 0.87772 0.94710 1.14561 1.98276 1.37393 1.76854 1.91552 1.21806 0.88498 0.96240 1.04943 1.44270 1.05065 1.16379 1.45349 0.68532 0.87022 0.87029 0.89652 0.89120 0.94037 0.93035 0.91576 0.83429 0.81230 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.45 -7.23 18.54 42.15 0.78 -6.45 16 2 C 0.22 3.03 15.43 -20.76 -0.32 2.71 16 3 C -0.05 -0.56 6.03 -29.52 -0.18 -0.74 16 4 C 0.13 1.91 5.33 -4.04 -0.02 1.89 16 5 N -0.60 -10.50 2.46 -176.60 -0.43 -10.94 16 6 C 0.21 4.17 4.67 -5.19 -0.02 4.14 16 7 C -0.57 -12.19 7.43 -34.44 -0.26 -12.45 16 8 H 0.07 1.67 7.81 -52.49 -0.41 1.26 16 9 C 0.07 1.48 5.10 -17.82 -0.09 1.39 16 10 N -0.88 -20.12 13.29 55.43 0.74 -19.38 16 11 Si 0.90 17.92 29.54 -169.99 -5.02 12.90 16 12 H -0.27 -5.44 7.11 56.52 0.40 -5.04 16 13 H -0.28 -5.50 7.11 56.52 0.40 -5.10 16 14 H -0.28 -5.59 7.11 56.52 0.40 -5.19 16 15 C 0.59 11.25 7.62 -12.85 -0.10 11.15 16 16 O -0.55 -11.23 16.51 5.20 0.09 -11.14 16 17 C -0.03 -0.52 6.62 -81.98 -0.54 -1.07 16 18 C -0.12 -2.04 10.65 -39.09 -0.42 -2.46 16 19 C -0.14 -2.21 6.66 -39.94 -0.27 -2.47 16 20 Cl -0.07 -0.97 29.30 -51.86 -1.52 -2.49 16 21 C 0.03 0.44 11.87 -16.84 -0.20 0.24 16 22 N -0.50 -9.19 4.86 -9.35 -0.05 -9.24 16 23 H 0.45 8.91 3.37 -40.82 -0.14 8.78 16 24 H 0.11 1.21 8.14 -51.93 -0.42 0.78 16 25 H 0.11 1.31 8.14 -51.93 -0.42 0.89 16 26 H 0.09 1.29 7.47 -51.93 -0.39 0.91 16 27 H 0.09 1.31 8.08 -51.92 -0.42 0.89 16 28 H 0.04 0.84 5.14 -51.93 -0.27 0.58 16 29 H 0.05 1.02 8.07 -51.93 -0.42 0.60 16 30 H 0.27 6.03 8.31 -40.82 -0.34 5.69 16 31 H 0.15 2.40 8.06 -52.49 -0.42 1.98 16 32 H 0.17 2.31 8.06 -52.49 -0.42 1.89 16 LS Contribution 303.90 15.07 4.58 4.58 Total: -1.00 -24.81 303.90 -6.12 -30.93 By element: Atomic # 1 Polarization: 11.77 SS G_CDS: -2.87 Total: 8.90 kcal Atomic # 6 Polarization: 4.74 SS G_CDS: -2.41 Total: 2.32 kcal Atomic # 7 Polarization: -47.04 SS G_CDS: 1.04 Total: -46.00 kcal Atomic # 8 Polarization: -11.23 SS G_CDS: 0.09 Total: -11.14 kcal Atomic # 14 Polarization: 17.92 SS G_CDS: -5.02 Total: 12.90 kcal Atomic # 17 Polarization: -0.97 SS G_CDS: -1.52 Total: -2.49 kcal Total LS contribution 4.58 Total: 4.58 kcal Total: -24.81 -6.12 -30.93 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000049377390.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 67.256 kcal (2) G-P(sol) polarization free energy of solvation -24.813 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 42.443 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.118 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.931 kcal (6) G-S(sol) free energy of system = (1) + (5) 36.325 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.23 seconds