Wall clock time and date at job start Fri Apr 10 2020 14:01:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17402 * 1 3 3 C 1.47196 * 179.97438 * 2 1 4 4 N 1.46505 * 109.46844 * 95.24298 * 3 2 1 5 5 C 1.37103 * 119.99927 * 264.13309 * 4 3 2 6 6 H 1.08000 * 120.00085 * 197.42622 * 5 4 3 7 7 C 1.38953 * 119.99522 * 17.43778 * 5 4 3 8 8 N 1.31409 * 120.00371 * 21.53579 * 7 5 4 9 9 Si 1.86803 * 119.99405 * 201.52966 * 7 5 4 10 10 H 1.48493 * 109.47268 * 0.02562 * 9 7 5 11 11 H 1.48504 * 109.46958 * 120.00278 * 9 7 5 12 12 H 1.48503 * 109.47056 * 239.99843 * 9 7 5 13 13 C 1.34771 * 120.00306 * 84.14248 * 4 3 2 14 14 O 1.21288 * 120.00360 * 180.02562 * 13 4 3 15 15 C 1.50702 * 119.99774 * 359.97438 * 13 4 3 16 16 C 1.50706 * 109.47399 * 180.02562 * 15 13 4 17 17 C 1.35307 * 126.04039 * 100.24135 * 16 15 13 18 18 N 1.34948 * 107.76210 * 180.14078 * 17 16 15 19 19 C 1.46498 * 126.02939 * 179.89944 * 18 17 16 20 20 N 1.40087 * 107.94841 * 359.63977 * 18 17 16 21 21 C 1.30895 * 108.20020 * 0.22495 * 20 18 17 22 22 Cl 1.73596 * 125.91368 * 179.97438 * 21 20 18 23 23 H 4.40644 * 5.51417 * 180.02562 * 4 1 2 24 24 H 1.09000 * 109.47117 * 335.24381 * 3 2 1 25 25 H 1.08993 * 109.47057 * 215.23693 * 3 2 1 26 26 H 0.96996 * 119.99692 * 180.02562 * 8 7 5 27 27 H 1.09005 * 109.47300 * 60.00883 * 15 13 4 28 28 H 1.08996 * 109.47648 * 300.00844 * 15 13 4 29 29 H 1.08002 * 126.12525 * 0.02562 * 17 16 15 30 30 H 1.08998 * 109.47663 * 269.72352 * 19 18 17 31 31 H 1.09010 * 109.46604 * 29.71818 * 19 18 17 32 32 H 1.08997 * 109.47637 * 149.71216 * 19 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 7 3.1342 0.1271 -1.3755 5 6 3.4776 -0.9936 -2.0868 6 1 4.0899 -0.9048 -2.9720 7 6 3.0376 -2.2436 -1.6687 8 7 1.9862 -2.3424 -0.8867 9 14 3.9407 -3.7835 -2.2187 10 1 5.0830 -3.4036 -3.0882 11 1 4.4467 -4.5125 -1.0279 12 1 3.0107 -4.6587 -2.9766 13 6 3.2460 1.3450 -1.9417 14 8 3.6497 1.4497 -3.0806 15 6 2.8682 2.5768 -1.1600 16 6 3.0833 3.7996 -2.0143 17 6 2.1257 4.4806 -2.6851 18 7 2.7235 5.5048 -3.3290 19 6 2.0569 6.4957 -4.1775 20 7 4.0930 5.4571 -3.0383 21 6 4.3082 4.4345 -2.2500 22 17 5.8466 3.9493 -1.6086 23 1 -1.0501 0.0002 0.0001 24 1 3.0097 -0.9324 0.4303 25 1 3.0089 0.8401 0.5929 26 1 1.6794 -3.2150 -0.5946 27 1 3.4882 2.6442 -0.2660 28 1 1.8190 2.5161 -0.8707 29 1 1.0717 4.2454 -2.7036 30 1 2.0443 6.1419 -5.2084 31 1 1.0337 6.6413 -3.8309 32 1 2.5964 7.4414 -4.1245 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000491180958.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 14:01:43 Heat of formation + Delta-G solvation = 113.164400 kcal Electronic energy + Delta-G solvation = -19405.153234 eV Core-core repulsion = 16203.321744 eV Total energy + Delta-G solvation = -3201.831490 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 281.067 amu Computer time = 0.31 seconds Orbital eigenvalues (eV) -41.08382 -38.44967 -36.40921 -35.10630 -33.27570 -32.17235 -31.34462 -31.09448 -28.18620 -26.44033 -25.71896 -24.05630 -21.04769 -20.62037 -18.89482 -17.83296 -16.68625 -16.51419 -16.10988 -15.35667 -14.83622 -14.49413 -14.38406 -14.03961 -13.48663 -13.18169 -13.10872 -12.61161 -12.39097 -12.15341 -12.01986 -11.58955 -11.39660 -11.31649 -11.11683 -10.96994 -10.42784 -10.25144 -10.21579 -9.33868 -9.21517 -9.04104 -8.85419 -8.47494 -8.02766 -7.78369 -6.27217 -3.78266 1.75783 1.94845 2.80686 3.08661 3.17797 3.29688 3.37070 3.74856 3.98262 4.08607 4.24426 4.59444 4.92827 5.06902 5.08519 5.14783 5.30559 5.43370 5.49970 5.56013 5.83288 5.99502 6.08255 6.23016 6.44041 6.53430 6.80645 7.05165 7.06760 7.62879 7.65198 8.14067 8.51022 8.82856 9.22581 9.44253 10.01483 10.74060 Molecular weight = 281.07amu Principal moments of inertia in cm(-1) A = 0.020931 B = 0.005339 C = 0.004859 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1337.411313 B = 5242.933539 C = 5761.591785 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.265 4.265 2 C -0.110 4.110 3 C 0.230 3.770 4 N -0.445 5.445 5 C -0.309 4.309 6 H 0.103 0.897 7 C 0.030 3.970 8 N -0.865 5.865 9 Si 0.917 3.083 10 H -0.268 1.268 11 H -0.281 1.281 12 H -0.284 1.284 13 C 0.459 3.541 14 O -0.572 6.572 15 C -0.061 4.061 16 C -0.180 4.180 17 C 0.068 3.932 18 N -0.370 5.370 19 C 0.107 3.893 20 N -0.291 5.291 21 C 0.144 3.856 22 Cl 0.004 6.996 23 H 0.198 0.802 24 H 0.109 0.891 25 H 0.063 0.937 26 H 0.266 0.734 27 H 0.087 0.913 28 H 0.089 0.911 29 H 0.179 0.821 30 H 0.075 0.925 31 H 0.088 0.912 32 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.139 12.778 2.037 13.115 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.284 4.284 2 C -0.111 4.111 3 C 0.107 3.893 4 N -0.165 5.165 5 C -0.437 4.437 6 H 0.121 0.879 7 C -0.174 4.174 8 N -0.504 5.504 9 Si 0.744 3.256 10 H -0.193 1.193 11 H -0.207 1.207 12 H -0.210 1.210 13 C 0.247 3.753 14 O -0.454 6.454 15 C -0.103 4.103 16 C -0.192 4.192 17 C -0.077 4.077 18 N -0.154 5.154 19 C -0.034 4.034 20 N -0.117 5.117 21 C -0.047 4.047 22 Cl 0.031 6.969 23 H 0.215 0.785 24 H 0.127 0.873 25 H 0.081 0.919 26 H 0.076 0.924 27 H 0.105 0.895 28 H 0.107 0.893 29 H 0.196 0.804 30 H 0.093 0.907 31 H 0.107 0.893 32 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges -1.418 13.695 0.885 13.796 hybrid contribution -0.355 -1.760 0.216 1.808 sum -1.773 11.935 1.101 12.116 Atomic orbital electron populations 1.24251 0.95347 1.06409 1.02433 1.23246 0.94394 0.95426 0.98056 1.18271 0.84181 1.01904 0.84958 1.43691 1.56661 1.05253 1.10866 1.19677 1.29814 0.82972 1.11195 0.87921 1.25240 0.95260 0.99174 0.97705 1.70090 1.19953 1.24792 1.35565 0.86017 0.79790 0.81387 0.78439 1.19269 1.20681 1.21039 1.19953 0.84007 0.84000 0.87369 1.90533 1.50170 1.86059 1.18679 1.19967 1.02846 0.90185 0.97261 1.19381 0.90495 1.01168 1.08170 1.22238 0.99620 0.90063 0.95826 1.48059 1.04446 1.23923 1.38984 1.21846 0.96857 0.90956 0.93780 1.77236 0.93457 1.21512 1.19505 1.22410 0.88746 0.95277 0.98275 1.98371 1.25246 1.89800 1.83443 0.78483 0.87272 0.91946 0.92354 0.89496 0.89272 0.80362 0.90672 0.89308 0.89388 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.27 -5.31 19.25 29.55 0.57 -4.74 16 2 C -0.11 -2.38 10.87 -37.12 -0.40 -2.78 16 3 C 0.23 4.99 4.91 -6.83 -0.03 4.95 16 4 N -0.45 -11.10 2.60 -117.93 -0.31 -11.40 16 5 C -0.31 -8.48 9.33 -14.93 -0.14 -8.62 16 6 H 0.10 3.00 7.39 -52.49 -0.39 2.62 16 7 C 0.03 0.77 4.87 -17.47 -0.08 0.69 16 8 N -0.87 -22.59 9.48 55.50 0.53 -22.06 16 9 Si 0.92 20.58 29.60 -169.99 -5.03 15.55 16 10 H -0.27 -6.09 7.11 56.52 0.40 -5.69 16 11 H -0.28 -6.15 7.11 56.52 0.40 -5.75 16 12 H -0.28 -6.43 7.11 56.52 0.40 -6.03 16 13 C 0.46 10.98 7.56 -10.99 -0.08 10.90 16 14 O -0.57 -15.79 15.68 5.55 0.09 -15.70 16 15 C -0.06 -1.13 4.64 -29.03 -0.13 -1.27 16 16 C -0.18 -3.25 4.60 -105.02 -0.48 -3.73 16 17 C 0.07 1.02 11.40 -17.23 -0.20 0.83 16 18 N -0.37 -5.38 4.01 -68.16 -0.27 -5.65 16 19 C 0.11 0.93 11.47 59.85 0.69 1.62 16 20 N -0.29 -5.16 12.58 32.94 0.41 -4.74 16 21 C 0.14 2.67 7.84 -17.30 -0.14 2.54 16 22 Cl 0.00 0.06 29.16 -51.86 -1.51 -1.45 16 23 H 0.20 3.19 7.80 -54.09 -0.42 2.77 16 24 H 0.11 2.51 6.44 -51.93 -0.33 2.18 16 25 H 0.06 1.11 6.69 -51.93 -0.35 0.77 16 26 H 0.27 6.66 8.31 -40.82 -0.34 6.32 16 27 H 0.09 1.45 7.42 -51.93 -0.39 1.07 16 28 H 0.09 1.52 7.50 -51.93 -0.39 1.13 16 29 H 0.18 2.08 8.06 -52.49 -0.42 1.66 16 30 H 0.07 0.61 8.14 -51.93 -0.42 0.18 16 31 H 0.09 0.51 8.14 -51.92 -0.42 0.08 16 32 H 0.09 0.67 8.14 -51.93 -0.42 0.25 16 LS Contribution 305.19 15.07 4.60 4.60 Total: -1.00 -33.92 305.19 -5.03 -38.95 By element: Atomic # 1 Polarization: 4.64 SS G_CDS: -3.09 Total: 1.55 kcal Atomic # 6 Polarization: 0.81 SS G_CDS: -0.44 Total: 0.38 kcal Atomic # 7 Polarization: -44.22 SS G_CDS: 0.36 Total: -43.86 kcal Atomic # 8 Polarization: -15.79 SS G_CDS: 0.09 Total: -15.70 kcal Atomic # 14 Polarization: 20.58 SS G_CDS: -5.03 Total: 15.55 kcal Atomic # 17 Polarization: 0.06 SS G_CDS: -1.51 Total: -1.45 kcal Total LS contribution 4.60 Total: 4.60 kcal Total: -33.92 -5.03 -38.95 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000491180958.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 152.110 kcal (2) G-P(sol) polarization free energy of solvation -33.918 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 118.192 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.027 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.945 kcal (6) G-S(sol) free energy of system = (1) + (5) 113.164 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.31 seconds