Wall clock time and date at job start Fri Apr 10 2020 14:12:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35679 * 116.99682 * 2 1 4 4 N 1.32298 * 119.67504 * 359.97438 * 3 2 1 5 5 C 1.32024 * 121.62853 * 179.97438 * 4 3 2 6 6 Cl 1.73598 * 119.59928 * 179.97438 * 5 4 3 7 7 C 1.38267 * 120.80294 * 359.71658 * 5 4 3 8 8 C 1.38723 * 119.27086 * 0.58100 * 7 5 4 9 9 C 1.38462 * 118.50264 * 359.42882 * 8 7 5 10 10 S 1.76194 * 120.43063 * 180.25145 * 9 8 7 11 11 O 1.42096 * 106.40277 * 357.97913 * 10 9 8 12 12 O 1.42101 * 106.40187 * 130.89395 * 10 9 8 13 13 N 1.65600 * 107.22299 * 244.43725 * 10 9 8 14 14 C 1.36935 * 119.99758 * 64.35110 * 13 10 9 15 15 H 1.07999 * 120.00572 * 5.06249 * 14 13 10 16 16 C 1.38816 * 119.99879 * 185.06422 * 14 13 10 17 17 N 1.31620 * 119.99851 * 359.97438 * 16 14 13 18 18 Si 1.86799 * 120.00134 * 179.97438 * 16 14 13 19 19 H 1.48501 * 109.46850 * 90.00030 * 18 16 14 20 20 H 1.48502 * 109.47285 * 210.00241 * 18 16 14 21 21 H 1.48503 * 109.47208 * 330.00107 * 18 16 14 22 22 H 1.09003 * 109.46585 * 179.97438 * 1 2 3 23 23 H 1.09001 * 109.47096 * 299.99540 * 1 2 3 24 24 H 1.09000 * 109.47507 * 59.99877 * 1 2 3 25 25 H 1.07994 * 120.36802 * 180.28257 * 7 5 4 26 26 H 1.08003 * 120.75014 * 179.70181 * 8 7 5 27 27 H 0.97002 * 119.99717 * 244.35392 * 13 10 9 28 28 H 0.97003 * 119.99641 * 179.97438 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0449 1.2089 0.0000 4 7 1.3180 2.3143 -0.0005 5 6 1.8769 3.5105 0.0000 6 17 0.8723 4.9263 -0.0014 7 6 3.2526 3.6492 0.0069 8 6 4.0489 2.5133 0.0012 9 6 3.4319 1.2738 0.0007 10 16 4.3942 -0.2021 0.0002 11 8 5.7545 0.2058 -0.0477 12 8 3.8658 -1.0260 1.0303 13 7 4.0903 -0.9851 -1.4270 14 6 4.4497 -0.4070 -2.6151 15 1 5.0039 0.5200 -2.6189 16 6 4.1018 -1.0124 -3.8149 17 7 3.4269 -2.1423 -3.8104 18 14 4.5916 -0.2234 -5.4357 19 1 5.9233 -0.7322 -5.8515 20 1 3.5859 -0.5616 -6.4748 21 1 4.6548 1.2510 -5.2695 22 1 -0.3632 -1.0277 -0.0005 23 1 -0.3633 0.5138 0.8900 24 1 -0.3634 0.5138 -0.8899 25 1 3.7022 4.6311 0.0119 26 1 5.1259 2.5940 0.0015 27 1 3.6576 -1.8533 -1.4213 28 1 3.1835 -2.5651 -4.6488 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001198712034.mol2 28 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 14:12:54 Heat of formation + Delta-G solvation = -77.130669 kcal Electronic energy + Delta-G solvation = -19499.084721 eV Core-core repulsion = 16089.978950 eV Total energy + Delta-G solvation = -3409.105771 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 292.012 amu Computer time = 1.84 seconds Orbital eigenvalues (eV) -40.47538 -37.93866 -36.60001 -35.94593 -34.70263 -34.65723 -32.49854 -31.05704 -30.53320 -27.12693 -24.60323 -23.76884 -23.03454 -18.73467 -18.34944 -18.20150 -17.38441 -16.84562 -16.21926 -15.82672 -15.33573 -14.65178 -14.34350 -14.19875 -13.89535 -13.66459 -13.33472 -12.94323 -12.06936 -11.93150 -11.73627 -11.39477 -11.37151 -11.10829 -10.98184 -10.87221 -10.84466 -10.68247 -10.62265 -10.29066 -10.00496 -9.90661 -9.56837 -8.53977 -8.34643 -6.59725 -3.97837 0.75834 1.32397 1.52530 1.70892 3.13216 3.17438 3.19068 3.21116 3.56366 3.98872 4.40849 4.51098 4.68552 4.90268 5.04259 5.09494 5.37080 5.44647 5.49452 5.65041 5.78913 5.86037 6.13375 6.34915 6.97485 7.21883 7.37888 7.60890 8.58504 8.68932 9.15113 10.54778 Molecular weight = 292.01amu Principal moments of inertia in cm(-1) A = 0.015079 B = 0.006866 C = 0.006174 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1856.437882 B = 4077.291195 C = 4534.253608 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.040 3.960 2 O -0.282 6.282 3 C 0.429 3.571 4 N -0.554 5.554 5 C 0.246 3.754 6 Cl -0.035 7.035 7 C -0.218 4.218 8 C 0.057 3.943 9 C -0.722 4.722 10 S 2.597 3.403 11 O -0.975 6.975 12 O -0.991 6.991 13 N -0.932 5.932 14 C -0.263 4.263 15 H 0.106 0.894 16 C 0.033 3.967 17 N -0.863 5.863 18 Si 0.923 3.077 19 H -0.273 1.273 20 H -0.281 1.281 21 H -0.267 1.267 22 H 0.102 0.898 23 H 0.059 0.941 24 H 0.062 0.938 25 H 0.149 0.851 26 H 0.165 0.835 27 H 0.413 0.587 28 H 0.277 0.723 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.244 9.006 3.779 10.649 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.055 4.055 2 O -0.186 6.186 3 C 0.249 3.751 4 N -0.281 5.281 5 C 0.082 3.918 6 Cl -0.007 7.007 7 C -0.240 4.240 8 C 0.031 3.969 9 C -0.802 4.802 10 S 2.686 3.314 11 O -0.965 6.965 12 O -0.980 6.980 13 N -0.683 5.683 14 C -0.407 4.407 15 H 0.123 0.877 16 C -0.177 4.177 17 N -0.504 5.504 18 Si 0.749 3.251 19 H -0.198 1.198 20 H -0.206 1.206 21 H -0.192 1.192 22 H 0.120 0.880 23 H 0.077 0.923 24 H 0.080 0.920 25 H 0.167 0.833 26 H 0.183 0.817 27 H 0.249 0.751 28 H 0.087 0.913 Dipole moment (debyes) X Y Z Total from point charges -4.648 8.640 4.557 10.818 hybrid contribution -0.314 0.945 -1.174 1.539 sum -4.962 9.585 3.383 11.311 Atomic orbital electron populations 1.22956 0.76666 1.03631 1.02294 1.86419 1.23438 1.22917 1.85872 1.18779 0.87547 0.83681 0.85116 1.66490 1.41407 0.97886 1.22333 1.21330 0.88640 0.87369 0.94451 1.98397 1.70971 1.35107 1.96188 1.21711 0.91704 1.01077 1.09537 1.21281 1.01176 0.89170 0.85307 1.32269 1.05325 1.23935 1.18638 1.07928 0.75835 0.73002 0.74674 1.93440 1.32383 1.83149 1.87499 1.93420 1.80223 1.66483 1.57886 1.51856 1.71320 1.24774 1.20305 1.19441 1.29016 1.09165 0.83068 0.87672 1.25364 0.96270 0.96325 0.99751 1.69706 1.35903 1.16082 1.28743 0.85973 0.78629 0.79606 0.80878 1.19810 1.20601 1.19196 0.87951 0.92259 0.91975 0.83292 0.81742 0.75073 0.91321 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 24. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.59 10.38 101.05 1.05 1.64 15 2 O -0.28 -5.59 9.31 -27.20 -0.25 -5.84 15 3 C 0.43 8.57 7.45 -17.13 -0.13 8.44 15 4 N -0.55 -10.09 9.19 -10.43 -0.10 -10.18 15 5 C 0.25 3.95 7.27 -17.46 -0.13 3.82 15 6 Cl -0.04 -0.46 29.11 -51.86 -1.51 -1.97 15 7 C -0.22 -3.21 9.87 -39.39 -0.39 -3.60 15 8 C 0.06 0.96 9.66 -39.32 -0.38 0.58 15 9 C -0.72 -14.50 5.84 -39.27 -0.23 -14.73 15 10 S 2.60 58.28 5.28 -107.50 -0.57 57.71 15 11 O -0.97 -22.95 16.75 -57.18 -0.96 -23.90 15 12 O -0.99 -24.03 17.35 -62.14 -1.08 -25.10 15 13 N -0.93 -22.27 5.74 31.50 0.18 -22.09 15 14 C -0.26 -6.48 9.64 -15.06 -0.15 -6.62 15 15 H 0.11 2.45 7.80 -52.49 -0.41 2.05 15 16 C 0.03 0.80 5.50 -17.43 -0.10 0.70 15 17 N -0.86 -22.02 13.06 55.49 0.72 -21.30 15 18 Si 0.92 18.99 29.55 -169.99 -5.02 13.96 15 19 H -0.27 -5.56 7.11 56.52 0.40 -5.16 15 20 H -0.28 -5.74 7.11 56.52 0.40 -5.34 15 21 H -0.27 -5.37 7.11 56.52 0.40 -4.96 15 22 H 0.10 1.28 8.14 -51.93 -0.42 0.86 15 23 H 0.06 0.81 8.10 -51.93 -0.42 0.39 15 24 H 0.06 0.91 8.10 -51.93 -0.42 0.48 15 25 H 0.15 1.63 8.06 -52.49 -0.42 1.21 15 26 H 0.17 2.43 7.43 -52.48 -0.39 2.04 15 27 H 0.41 10.07 8.04 -34.47 -0.28 9.79 15 28 H 0.28 6.62 8.31 -40.82 -0.34 6.28 15 LS Contribution 286.27 15.07 4.31 4.31 Total: -1.00 -29.91 286.27 -6.61 -36.52 By element: Atomic # 1 Polarization: 9.54 SS G_CDS: -1.90 Total: 7.64 kcal Atomic # 6 Polarization: -9.32 SS G_CDS: -0.44 Total: -9.77 kcal Atomic # 7 Polarization: -54.38 SS G_CDS: 0.81 Total: -53.57 kcal Atomic # 8 Polarization: -52.56 SS G_CDS: -2.29 Total: -54.85 kcal Atomic # 14 Polarization: 18.99 SS G_CDS: -5.02 Total: 13.96 kcal Atomic # 16 Polarization: 58.28 SS G_CDS: -0.57 Total: 57.71 kcal Atomic # 17 Polarization: -0.46 SS G_CDS: -1.51 Total: -1.97 kcal Total LS contribution 4.31 Total: 4.31 kcal Total: -29.91 -6.61 -36.52 kcal The number of atoms in the molecule is 28 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001198712034.mol2 28 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -40.608 kcal (2) G-P(sol) polarization free energy of solvation -29.913 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -70.521 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.609 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.522 kcal (6) G-S(sol) free energy of system = (1) + (5) -77.131 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.84 seconds