Wall clock time and date at job start Fri Apr 10 2020 14:30:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.33120 * 1 3 3 F 1.35104 * 119.99580 * 2 1 4 4 C 1.47293 * 120.00041 * 179.73053 * 2 1 3 5 5 O 1.21603 * 120.00186 * 0.27163 * 4 2 1 6 6 N 1.34782 * 119.99527 * 180.27423 * 4 2 1 7 7 C 1.46499 * 119.99690 * 180.02562 * 6 4 2 8 8 C 1.54898 * 129.08565 * 299.93401 * 7 6 4 9 9 C 1.57172 * 77.91378 * 180.16552 * 8 7 6 10 10 C 1.50703 * 129.24941 * 179.19348 * 9 8 7 11 11 O 1.21287 * 119.99905 * 241.28732 * 10 9 8 12 12 N 1.34771 * 120.00196 * 61.28409 * 10 9 8 13 13 C 1.47073 * 136.05369 * 359.63318 * 12 10 9 14 14 C 1.53756 * 87.88782 * 152.95929 * 13 12 10 15 15 C 1.50695 * 114.08643 * 139.77733 * 14 13 12 16 16 H 1.08005 * 120.00090 * 266.56018 * 15 14 13 17 17 C 1.37874 * 120.00390 * 86.56305 * 15 14 13 18 18 N 1.31517 * 119.99614 * 0.02562 * 17 15 14 19 19 Si 1.86797 * 120.00592 * 179.97438 * 17 15 14 20 20 H 1.48498 * 109.46878 * 359.97438 * 19 17 15 21 21 H 1.48492 * 109.47194 * 119.99969 * 19 17 15 22 22 H 1.48499 * 109.47206 * 240.00174 * 19 17 15 23 23 C 1.47064 * 136.06259 * 179.97438 * 12 10 9 24 24 C 1.54411 * 129.01428 * 179.97438 * 7 6 4 25 25 C 1.54885 * 83.77227 * 317.35539 * 9 8 7 26 26 H 1.07998 * 120.00588 * 359.97438 * 1 2 3 27 27 H 1.08001 * 119.99427 * 180.02562 * 1 2 3 28 28 H 0.97000 * 120.00511 * 359.97438 * 6 4 2 29 29 H 1.09006 * 114.97390 * 291.95482 * 8 7 6 30 30 H 1.08997 * 114.97885 * 67.13742 * 8 7 6 31 31 H 1.09002 * 113.46752 * 267.69172 * 13 12 10 32 32 H 1.08994 * 113.46815 * 38.13192 * 13 12 10 33 33 H 1.08997 * 114.39914 * 272.67857 * 14 13 12 34 34 H 0.96996 * 120.00139 * 179.97438 * 18 17 15 35 35 H 1.09005 * 113.46669 * 321.87292 * 23 12 10 36 36 H 1.09002 * 113.46843 * 92.30302 * 23 12 10 37 37 H 1.08996 * 114.93180 * 293.13039 * 24 7 6 38 38 H 1.09007 * 114.93250 * 68.09414 * 24 7 6 39 39 H 1.08999 * 116.12271 * 290.12163 * 25 9 8 40 40 H 1.09005 * 113.82713 * 154.96519 * 25 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3312 0.0000 0.0000 3 9 2.0066 1.1701 0.0000 4 6 2.0677 -1.2756 0.0060 5 8 1.4597 -2.3287 0.0060 6 7 3.4155 -1.2754 0.0116 7 6 4.1480 -2.5441 0.0170 8 6 4.1125 -3.6879 1.0609 9 6 5.1421 -4.2358 0.0073 10 6 5.9152 -5.5294 0.0132 11 8 7.1278 -5.5111 0.0333 12 7 5.2593 -6.7066 -0.0038 13 6 3.8524 -7.1347 -0.0226 14 6 4.3127 -8.4216 -0.7270 15 6 3.6118 -9.6678 -0.2508 16 1 4.0487 -10.2662 0.5350 17 6 2.4129 -10.0441 -0.8182 18 7 1.8812 -9.3157 -1.7754 19 14 1.5445 -11.5892 -0.2283 20 1 2.3448 -12.2264 0.8481 21 1 0.2022 -11.2326 0.2970 22 1 1.3967 -12.5372 -1.3617 23 6 5.6352 -8.1284 -0.0056 24 6 5.6731 -2.7860 0.0232 25 6 4.1211 -3.6920 -1.0226 26 1 -0.5401 0.9352 0.0004 27 1 -0.5399 -0.9354 0.0004 28 1 3.9005 -0.4354 0.0113 29 1 4.5429 -3.4392 2.0310 30 1 3.1661 -4.2251 1.1230 31 1 3.4381 -7.3080 0.9706 32 1 3.2149 -6.5036 -0.6416 33 1 4.3696 -8.3449 -1.8128 34 1 1.0379 -9.5806 -2.1749 35 1 6.5164 -8.3437 -0.6101 36 1 5.6913 -8.5638 0.9921 37 1 6.1911 -2.4764 -0.8844 38 1 6.1812 -2.4918 0.9416 39 1 3.1752 -4.2294 -1.0905 40 1 4.5595 -3.4471 -1.9901 RHF calculation, no. of doubly occupied orbitals= 57 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001270956281.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 14:30:23 Heat of formation + Delta-G solvation = 44.591935 kcal Electronic energy + Delta-G solvation = -24956.693824 eV Core-core repulsion = 21077.903107 eV Total energy + Delta-G solvation = -3878.790717 eV No. of doubly occupied orbitals = 57 Molecular weight (most abundant/longest-lived isotopes) = 308.132 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -49.32154 -42.14956 -39.57217 -38.98697 -36.89090 -34.10372 -32.68368 -32.63340 -29.42047 -26.20916 -25.82686 -25.78474 -25.07333 -24.92147 -23.21845 -20.65422 -20.17540 -19.13139 -18.68767 -17.84363 -17.00450 -16.62363 -16.23533 -16.12767 -15.65602 -15.21203 -14.80005 -14.72759 -14.50145 -14.24077 -14.16165 -13.92654 -13.33560 -13.29442 -13.01699 -12.38815 -12.09181 -11.93745 -11.58185 -11.48437 -11.30039 -11.20528 -10.96342 -10.81405 -10.60529 -10.45785 -10.36792 -10.16787 -9.90376 -9.64844 -9.32314 -9.22397 -9.02471 -8.58376 -7.89978 -6.17540 -4.23302 0.76296 2.39796 2.67762 2.88397 3.23822 3.32600 3.35440 3.43903 3.72134 4.05515 4.29456 4.30973 4.34140 4.36465 4.48790 4.60675 4.95521 5.06132 5.13003 5.31575 5.50398 5.55755 5.60975 5.71832 5.84406 5.86768 5.96592 6.00671 6.05380 6.16457 6.25006 6.33546 6.43051 6.58607 6.68285 6.82588 7.04882 7.55299 7.70929 7.80050 8.17997 8.45461 8.72761 8.80904 9.43682 10.92188 Molecular weight = 308.13amu Principal moments of inertia in cm(-1) A = 0.014695 B = 0.003498 C = 0.002908 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1904.908754 B = 8002.055714 C = 9627.086129 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.132 4.132 2 C -0.002 4.002 3 F -0.141 7.141 4 C 0.546 3.454 5 O -0.501 6.501 6 N -0.668 5.668 7 C 0.089 3.911 8 C -0.098 4.098 9 C -0.140 4.140 10 C 0.597 3.403 11 O -0.558 6.558 12 N -0.634 5.634 13 C 0.099 3.901 14 C 0.035 3.965 15 C -0.518 4.518 16 H 0.064 0.936 17 C 0.069 3.931 18 N -0.884 5.884 19 Si 0.895 3.105 20 H -0.271 1.271 21 H -0.283 1.283 22 H -0.283 1.283 23 C 0.101 3.899 24 C -0.081 4.081 25 C -0.097 4.097 26 H 0.130 0.870 27 H 0.145 0.855 28 H 0.411 0.589 29 H 0.078 0.922 30 H 0.091 0.909 31 H 0.075 0.925 32 H 0.061 0.939 33 H 0.069 0.931 34 H 0.264 0.736 35 H 0.059 0.941 36 H 0.075 0.925 37 H 0.083 0.917 38 H 0.083 0.917 39 H 0.093 0.907 40 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.074 19.014 3.380 19.342 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.171 4.171 2 C -0.024 4.024 3 F -0.120 7.120 4 C 0.332 3.668 5 O -0.376 6.376 6 N -0.317 5.317 7 C 0.001 3.999 8 C -0.137 4.137 9 C -0.144 4.144 10 C 0.385 3.615 11 O -0.439 6.439 12 N -0.366 5.366 13 C -0.024 4.024 14 C 0.016 3.984 15 C -0.556 4.556 16 H 0.082 0.918 17 C -0.135 4.135 18 N -0.521 5.521 19 Si 0.723 3.277 20 H -0.196 1.196 21 H -0.209 1.209 22 H -0.209 1.209 23 C -0.020 4.020 24 C -0.119 4.119 25 C -0.136 4.136 26 H 0.148 0.852 27 H 0.163 0.837 28 H 0.247 0.753 29 H 0.096 0.904 30 H 0.110 0.890 31 H 0.093 0.907 32 H 0.080 0.920 33 H 0.087 0.913 34 H 0.073 0.927 35 H 0.077 0.923 36 H 0.093 0.907 37 H 0.102 0.898 38 H 0.102 0.898 39 H 0.112 0.888 40 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges -0.906 18.530 3.269 18.838 hybrid contribution -0.346 0.098 0.321 0.482 sum -1.253 18.628 3.590 19.012 Atomic orbital electron populations 1.24987 0.93245 1.06000 0.92859 1.19858 0.91781 0.80591 1.10183 1.91515 1.80755 1.45301 1.94409 1.18368 0.82213 0.88777 0.77483 1.90921 1.67699 1.30898 1.48095 1.44480 1.05329 1.07657 1.74241 1.22902 0.93631 0.84376 0.98982 1.24832 0.98625 0.94124 0.96157 1.23593 0.96984 0.93371 1.00468 1.17756 0.85777 0.81453 0.76552 1.90653 1.13460 1.86898 1.52840 1.49888 1.12208 1.04941 1.69566 1.23720 0.80837 0.97014 1.00787 1.20396 0.89057 0.92506 0.96425 1.20933 1.05753 1.08272 1.20625 0.91757 1.25027 0.97267 0.96800 0.94400 1.69960 1.18885 1.38360 1.24848 0.86486 0.79522 0.82935 0.78796 1.19560 1.20887 1.20881 1.23390 1.00853 0.77039 1.00753 1.23978 0.92376 0.92533 1.03054 1.24371 0.98817 0.93986 0.96393 0.85217 0.83718 0.75254 0.90378 0.89033 0.90722 0.92020 0.91270 0.92660 0.92291 0.90691 0.89802 0.89812 0.88823 0.90387 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -0.93 14.27 28.95 0.41 -0.52 16 2 C 0.00 -0.02 7.42 -37.68 -0.28 -0.30 16 3 F -0.14 -1.21 16.74 2.25 0.04 -1.17 16 4 C 0.55 6.43 7.77 -12.58 -0.10 6.33 16 5 O -0.50 -7.67 16.10 5.27 0.08 -7.58 16 6 N -0.67 -7.02 5.71 -65.12 -0.37 -7.39 16 7 C 0.09 1.12 3.79 -148.42 -0.56 0.55 16 8 C -0.10 -1.39 7.88 -24.69 -0.19 -1.58 16 9 C -0.14 -2.22 3.33 -170.99 -0.57 -2.79 16 10 C 0.60 11.87 8.19 -10.99 -0.09 11.78 16 11 O -0.56 -12.56 17.87 5.55 0.10 -12.46 16 12 N -0.63 -13.01 3.69 -185.06 -0.68 -13.69 16 13 C 0.10 2.10 7.99 -8.37 -0.07 2.03 16 14 C 0.04 0.83 3.80 -91.13 -0.35 0.48 16 15 C -0.52 -13.13 8.82 -34.44 -0.30 -13.44 16 16 H 0.06 1.60 7.81 -52.48 -0.41 1.19 16 17 C 0.07 1.79 5.46 -17.82 -0.10 1.69 16 18 N -0.88 -24.12 13.26 55.43 0.74 -23.39 16 19 Si 0.90 20.09 29.54 -169.99 -5.02 15.07 16 20 H -0.27 -5.98 7.11 56.52 0.40 -5.58 16 21 H -0.28 -6.35 7.11 56.52 0.40 -5.95 16 22 H -0.28 -6.36 7.11 56.52 0.40 -5.96 16 23 C 0.10 2.11 8.17 -8.52 -0.07 2.04 16 24 C -0.08 -1.01 7.78 -26.71 -0.21 -1.21 16 25 C -0.10 -1.42 7.77 -26.01 -0.20 -1.63 16 26 H 0.13 0.58 8.06 -52.49 -0.42 0.16 16 27 H 0.14 1.08 7.50 -52.49 -0.39 0.69 16 28 H 0.41 3.15 8.38 -40.82 -0.34 2.81 16 29 H 0.08 1.00 7.91 -51.93 -0.41 0.59 16 30 H 0.09 1.43 7.97 -51.93 -0.41 1.01 16 31 H 0.07 1.57 8.10 -51.93 -0.42 1.15 16 32 H 0.06 1.33 7.83 -51.93 -0.41 0.92 16 33 H 0.07 1.77 8.11 -51.93 -0.42 1.35 16 34 H 0.26 6.86 8.31 -40.82 -0.34 6.52 16 35 H 0.06 1.20 8.14 -51.93 -0.42 0.77 16 36 H 0.07 1.49 8.10 -51.93 -0.42 1.07 16 37 H 0.08 0.96 7.94 -51.93 -0.41 0.55 16 38 H 0.08 0.94 7.91 -51.92 -0.41 0.53 16 39 H 0.09 1.55 7.66 -51.93 -0.40 1.15 16 40 H 0.08 1.07 7.93 -51.93 -0.41 0.66 16 LS Contribution 354.33 15.07 5.34 5.34 Total: -1.00 -30.50 354.33 -7.70 -38.21 By element: Atomic # 1 Polarization: 8.88 SS G_CDS: -5.25 Total: 3.63 kcal Atomic # 6 Polarization: 6.11 SS G_CDS: -2.67 Total: 3.44 kcal Atomic # 7 Polarization: -44.15 SS G_CDS: -0.32 Total: -44.47 kcal Atomic # 8 Polarization: -20.23 SS G_CDS: 0.18 Total: -20.04 kcal Atomic # 9 Polarization: -1.21 SS G_CDS: 0.04 Total: -1.17 kcal Atomic # 14 Polarization: 20.09 SS G_CDS: -5.02 Total: 15.07 kcal Total LS contribution 5.34 Total: 5.34 kcal Total: -30.50 -7.70 -38.21 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001270956281.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 82.798 kcal (2) G-P(sol) polarization free energy of solvation -30.501 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 52.297 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.705 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.206 kcal (6) G-S(sol) free energy of system = (1) + (5) 44.592 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds