Wall clock time and date at job start Fri Apr 10 2020 14:31:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46498 * 1 3 3 C 1.37101 * 120.00276 * 2 1 4 4 H 1.07995 * 120.00404 * 205.14885 * 3 2 1 5 5 C 1.38954 * 119.99718 * 25.14665 * 3 2 1 6 6 N 1.31418 * 119.99770 * 11.74739 * 5 3 2 7 7 Si 1.86796 * 120.00233 * 191.74220 * 5 3 2 8 8 H 1.48496 * 109.47006 * 90.00119 * 7 5 3 9 9 H 1.48499 * 109.47516 * 210.00206 * 7 5 3 10 10 H 1.48503 * 109.46916 * 330.00182 * 7 5 3 11 11 C 1.34773 * 120.00114 * 180.02562 * 2 1 3 12 12 O 1.21294 * 120.00246 * 179.97438 * 11 2 1 13 13 C 1.50705 * 119.99940 * 359.97438 * 11 2 1 14 14 H 1.09004 * 115.54449 * 34.42530 * 13 11 2 15 15 C 1.52990 * 117.50019 * 248.74825 * 13 11 2 16 16 C 1.52997 * 117.49700 * 180.08810 * 13 11 2 17 17 H 1.09005 * 117.49928 * 215.00510 * 16 13 11 18 18 C 1.50702 * 117.50153 * 0.02664 * 16 13 11 19 19 C 1.38235 * 119.99252 * 59.72576 * 18 16 13 20 20 C 1.38203 * 120.02624 * 179.72463 * 19 18 16 21 21 C 1.38378 * 120.01114 * 0.55169 * 20 19 18 22 22 Cl 1.73594 * 120.00865 * 179.74615 * 21 20 19 23 23 C 1.38317 * 119.98870 * 359.72294 * 21 20 19 24 24 C 1.38340 * 119.99116 * 240.00090 * 18 16 13 25 25 Cl 1.73600 * 120.00852 * 0.02562 * 24 18 16 26 26 H 1.08998 * 109.47412 * 265.05606 * 1 2 3 27 27 H 1.09004 * 109.47127 * 25.06177 * 1 2 3 28 28 H 1.08995 * 109.47026 * 145.05298 * 1 2 3 29 29 H 0.97003 * 119.99694 * 180.02562 * 6 5 3 30 30 H 1.09005 * 117.50002 * 359.97438 * 15 13 11 31 31 H 1.09003 * 117.49893 * 144.97571 * 15 13 11 32 32 H 1.08002 * 119.99018 * 359.97438 * 19 18 16 33 33 H 1.07994 * 119.99492 * 180.27087 * 20 19 18 34 34 H 1.07994 * 120.01404 * 180.02562 * 23 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1505 1.1873 0.0000 4 1 3.1537 1.2317 -0.3974 5 6 1.5545 2.3336 0.5114 6 7 0.4387 2.2429 1.1997 7 14 2.3394 4.0036 0.2206 8 1 1.8079 4.5882 -1.0367 9 1 2.0225 4.9043 1.3579 10 1 3.8118 3.8459 0.1095 11 6 2.1389 -1.1672 -0.0005 12 8 3.3518 -1.1672 -0.0010 13 6 1.3854 -2.4723 -0.0005 14 1 0.4476 -2.4736 -0.5562 15 6 1.4586 -3.3303 1.2640 16 6 2.2075 -3.7626 0.0010 17 1 1.8105 -4.6130 -0.5536 18 6 3.7088 -3.6312 0.0029 19 6 4.3431 -2.9694 1.0375 20 6 5.7203 -2.8534 1.0430 21 6 6.4641 -3.3899 0.0067 22 17 8.1934 -3.2385 0.0103 23 6 5.8295 -4.0473 -1.0317 24 6 4.4513 -4.1680 -1.0336 25 17 3.6538 -4.9923 -2.3367 26 1 -0.3634 -0.0886 1.0238 27 1 -0.3633 0.9309 -0.4353 28 1 -0.3633 -0.8423 -0.5886 29 1 0.0225 3.0432 1.5563 30 1 2.0522 -2.9511 2.0959 31 1 0.5688 -3.8959 1.5407 32 1 3.7627 -2.5462 1.8441 33 1 6.2157 -2.3401 1.8537 34 1 6.4097 -4.4665 -1.8404 RHF calculation, no. of doubly occupied orbitals= 51 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000089335281.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 14:31:45 Heat of formation + Delta-G solvation = 20.492071 kcal Electronic energy + Delta-G solvation = -21451.290512 eV Core-core repulsion = 18016.492478 eV Total energy + Delta-G solvation = -3434.798034 eV No. of doubly occupied orbitals = 51 Molecular weight (most abundant/longest-lived isotopes) = 313.038 amu Computer time = 0.97 seconds Orbital eigenvalues (eV) -39.97566 -38.32939 -36.61370 -36.25193 -35.64950 -34.46537 -31.67268 -30.54052 -30.08953 -26.54922 -25.04721 -23.80788 -22.87272 -22.36369 -20.40594 -18.56039 -17.36107 -16.89598 -16.45036 -15.47241 -15.11011 -14.66685 -14.32272 -14.21236 -13.75787 -13.62234 -13.52513 -13.44132 -12.36168 -12.16654 -12.00284 -11.77144 -11.63881 -11.45531 -11.33480 -11.22964 -10.95257 -10.90991 -10.67947 -10.59468 -10.40254 -10.36884 -10.11751 -9.98795 -9.05185 -8.81861 -8.34628 -7.69941 -7.65309 -6.36883 -3.93248 1.33335 1.53695 2.07906 2.55695 3.11631 3.22636 3.27921 3.45753 3.94795 4.07837 4.35293 4.68364 4.86130 5.01350 5.08171 5.22164 5.29854 5.39772 5.49419 5.59810 5.74464 5.80730 5.91031 6.06218 6.14896 6.28370 6.31430 6.38605 6.52538 6.77237 6.83010 6.95777 7.16607 7.52179 8.11161 8.44628 9.14711 9.38239 9.95595 10.67414 Molecular weight = 313.04amu Principal moments of inertia in cm(-1) A = 0.013745 B = 0.004800 C = 0.003940 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2036.543439 B = 5831.762087 C = 7105.221822 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.112 3.888 2 N -0.437 5.437 3 C -0.304 4.304 4 H 0.098 0.902 5 C 0.032 3.968 6 N -0.881 5.881 7 Si 0.925 3.075 8 H -0.278 1.278 9 H -0.284 1.284 10 H -0.269 1.269 11 C 0.467 3.533 12 O -0.572 6.572 13 C -0.153 4.153 14 H 0.117 0.883 15 C -0.150 4.150 16 C -0.104 4.104 17 H 0.119 0.881 18 C -0.013 4.013 19 C -0.011 4.011 20 C -0.115 4.115 21 C -0.024 4.024 22 Cl -0.079 7.079 23 C -0.119 4.119 24 C -0.019 4.019 25 Cl -0.074 7.074 26 H 0.051 0.949 27 H 0.073 0.927 28 H 0.026 0.974 29 H 0.268 0.732 30 H 0.101 0.899 31 H 0.102 0.898 32 H 0.134 0.866 33 H 0.131 0.869 34 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.246 -12.498 -0.975 12.949 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.032 4.032 2 N -0.154 5.154 3 C -0.432 4.432 4 H 0.116 0.884 5 C -0.172 4.172 6 N -0.520 5.520 7 Si 0.751 3.249 8 H -0.204 1.204 9 H -0.209 1.209 10 H -0.193 1.193 11 C 0.256 3.744 12 O -0.457 6.457 13 C -0.174 4.174 14 H 0.134 0.866 15 C -0.188 4.188 16 C -0.123 4.123 17 H 0.136 0.864 18 C -0.014 4.014 19 C -0.030 4.030 20 C -0.134 4.134 21 C -0.051 4.051 22 Cl -0.051 7.051 23 C -0.139 4.139 24 C -0.046 4.046 25 Cl -0.045 7.045 26 H 0.070 0.930 27 H 0.092 0.908 28 H 0.044 0.956 29 H 0.078 0.922 30 H 0.119 0.881 31 H 0.121 0.879 32 H 0.151 0.849 33 H 0.148 0.852 34 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 3.763 -12.360 -1.001 12.959 hybrid contribution 0.067 1.077 -0.323 1.126 sum 3.830 -11.284 -1.324 11.989 Atomic orbital electron populations 1.21498 0.81352 0.99898 1.00471 1.43534 1.05437 1.04613 1.61853 1.19643 1.01010 0.84224 1.38300 0.88439 1.25352 0.96593 1.00140 0.95087 1.69990 1.19115 1.29749 1.33108 0.85946 0.79744 0.81337 0.77838 1.20356 1.20923 1.19332 1.19157 0.87504 0.83742 0.84044 1.90540 1.13316 1.85990 1.55879 1.22401 1.00878 0.91416 1.02723 0.86553 1.23060 1.02196 1.02009 0.91522 1.21037 0.89789 0.98632 1.02833 0.86360 1.18738 0.93485 0.96189 0.93024 1.20666 0.92876 0.92149 0.97302 1.20915 0.93863 1.00331 0.98260 1.20545 0.83962 1.03129 0.97479 1.98339 1.11303 1.96933 1.98491 1.20544 0.92405 1.02032 0.98913 1.20314 0.91762 1.01481 0.91050 1.98327 1.80338 1.77356 1.48523 0.93000 0.90785 0.95601 0.92229 0.88103 0.87918 0.84881 0.85151 0.84846 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.11 2.41 8.45 59.85 0.51 2.92 16 2 N -0.44 -10.76 3.01 -122.19 -0.37 -11.13 16 3 C -0.30 -8.21 9.23 -14.93 -0.14 -8.35 16 4 H 0.10 2.78 7.46 -52.49 -0.39 2.39 16 5 C 0.03 0.82 5.06 -17.46 -0.09 0.73 16 6 N -0.88 -22.94 10.83 55.50 0.60 -22.34 16 7 Si 0.92 20.51 29.57 -169.99 -5.03 15.48 16 8 H -0.28 -6.05 7.11 56.52 0.40 -5.65 16 9 H -0.28 -6.21 7.11 56.52 0.40 -5.81 16 10 H -0.27 -6.04 7.11 56.52 0.40 -5.64 16 11 C 0.47 10.62 7.26 -10.98 -0.08 10.54 16 12 O -0.57 -14.16 11.41 5.55 0.06 -14.09 16 13 C -0.15 -2.66 5.29 -91.78 -0.49 -3.14 16 14 H 0.12 1.82 6.51 -51.93 -0.34 1.49 16 15 C -0.15 -2.16 9.58 -26.70 -0.26 -2.41 16 16 C -0.10 -1.60 5.55 -91.74 -0.51 -2.11 16 17 H 0.12 1.60 7.16 -51.93 -0.37 1.22 16 18 C -0.01 -0.22 4.38 -104.58 -0.46 -0.68 16 19 C -0.01 -0.20 6.16 -39.60 -0.24 -0.44 16 20 C -0.11 -1.87 9.83 -39.54 -0.39 -2.26 16 21 C -0.02 -0.38 6.32 -39.50 -0.25 -0.63 16 22 Cl -0.08 -1.10 28.96 -51.86 -1.50 -2.60 16 23 C -0.12 -1.84 9.62 -39.51 -0.38 -2.22 16 24 C -0.02 -0.31 6.31 -39.50 -0.25 -0.56 16 25 Cl -0.07 -1.05 27.42 -51.86 -1.42 -2.47 16 26 H 0.05 1.14 7.85 -51.93 -0.41 0.74 16 27 H 0.07 1.71 6.78 -51.93 -0.35 1.36 16 28 H 0.03 0.46 6.22 -51.93 -0.32 0.14 16 29 H 0.27 6.63 8.31 -40.82 -0.34 6.29 16 30 H 0.10 1.51 6.18 -51.93 -0.32 1.19 16 31 H 0.10 1.17 8.14 -51.93 -0.42 0.75 16 32 H 0.13 2.31 5.76 -52.49 -0.30 2.01 16 33 H 0.13 1.92 8.06 -52.49 -0.42 1.50 16 34 H 0.13 1.79 8.06 -52.49 -0.42 1.37 16 LS Contribution 312.04 15.07 4.70 4.70 Total: -1.00 -28.53 312.04 -9.18 -37.71 By element: Atomic # 1 Polarization: 6.56 SS G_CDS: -3.21 Total: 3.35 kcal Atomic # 6 Polarization: -5.59 SS G_CDS: -3.02 Total: -8.61 kcal Atomic # 7 Polarization: -33.70 SS G_CDS: 0.23 Total: -33.47 kcal Atomic # 8 Polarization: -14.16 SS G_CDS: 0.06 Total: -14.09 kcal Atomic # 14 Polarization: 20.51 SS G_CDS: -5.03 Total: 15.48 kcal Atomic # 17 Polarization: -2.15 SS G_CDS: -2.92 Total: -5.07 kcal Total LS contribution 4.70 Total: 4.70 kcal Total: -28.53 -9.18 -37.71 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000089335281.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 58.202 kcal (2) G-P(sol) polarization free energy of solvation -28.529 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 29.673 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.181 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.710 kcal (6) G-S(sol) free energy of system = (1) + (5) 20.492 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.97 seconds