Wall clock time and date at job start Fri Apr 10 2020 14:45:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46497 * 1 3 3 C 1.46501 * 120.00497 * 2 1 4 4 C 1.52997 * 109.47005 * 264.57417 * 3 2 1 5 5 H 1.08995 * 110.59705 * 302.68513 * 4 3 2 6 6 C 1.54937 * 110.67052 * 65.69228 * 4 3 2 7 7 C 1.54597 * 102.92342 * 155.84429 * 6 4 3 8 8 H 1.09004 * 110.30646 * 96.96270 * 7 6 4 9 9 F 1.39902 * 110.30935 * 219.02729 * 7 6 4 10 10 C 1.53989 * 105.13902 * 338.04234 * 7 6 4 11 11 N 1.47899 * 107.06251 * 358.77522 * 10 7 6 12 12 C 1.46899 * 111.00515 * 145.83990 * 11 10 7 13 13 C 1.50702 * 109.46773 * 58.39147 * 12 11 10 14 14 N 1.31804 * 119.12234 * 269.72898 * 13 12 11 15 15 C 1.32331 * 120.81843 * 179.76115 * 14 13 12 16 16 C 1.38601 * 119.10156 * 0.50374 * 15 14 13 17 17 C 1.38598 * 118.40079 * 359.75112 * 16 15 14 18 18 N 1.31792 * 119.12279 * 89.99699 * 13 12 11 19 19 C 1.34778 * 119.99703 * 180.02562 * 2 1 3 20 20 O 1.21688 * 120.00194 * 179.97438 * 19 2 1 21 21 C 1.46378 * 120.00173 * 0.26928 * 19 2 1 22 22 H 1.07996 * 119.99895 * 359.72926 * 21 19 2 23 23 C 1.40044 * 120.00185 * 179.72882 * 21 19 2 24 24 N 1.30673 * 120.00065 * 359.97438 * 23 21 19 25 25 Si 1.86799 * 120.00055 * 180.02562 * 23 21 19 26 26 H 1.48500 * 109.47196 * 359.97438 * 25 23 21 27 27 H 1.48504 * 109.47397 * 119.99610 * 25 23 21 28 28 H 1.48497 * 109.46971 * 239.99792 * 25 23 21 29 29 H 1.09006 * 109.47041 * 270.00109 * 1 2 3 30 30 H 1.09001 * 109.47069 * 29.99673 * 1 2 3 31 31 H 1.09001 * 109.47785 * 149.99859 * 1 2 3 32 32 H 1.09001 * 109.46809 * 24.57355 * 3 2 1 33 33 H 1.08998 * 109.47243 * 144.56924 * 3 2 1 34 34 H 1.08996 * 110.72499 * 274.20967 * 6 4 3 35 35 H 1.09000 * 110.72274 * 37.30832 * 6 4 3 36 36 H 1.09002 * 109.91563 * 118.12595 * 10 7 6 37 37 H 1.08997 * 109.91852 * 239.22069 * 10 7 6 38 38 H 1.08992 * 109.47128 * 178.38985 * 12 11 10 39 39 H 1.09000 * 109.47294 * 298.39316 * 12 11 10 40 40 H 1.07992 * 120.44789 * 180.24007 * 15 14 13 41 41 H 1.08003 * 120.79844 * 179.77559 * 16 15 14 42 42 H 1.08001 * 120.44655 * 180.02562 * 17 16 15 43 43 H 0.96996 * 120.00186 * 180.02562 * 24 23 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1976 1.2687 0.0000 4 6 2.5707 1.6421 -1.4360 5 1 3.1598 0.8496 -1.8975 6 6 1.3001 1.9367 -2.2723 7 6 1.8311 2.8564 -3.3957 8 1 2.0375 2.2753 -4.2945 9 9 0.9049 3.8673 -3.6741 10 6 3.1335 3.4605 -2.8389 11 7 3.3054 2.9327 -1.4680 12 6 4.7269 2.7371 -1.1534 13 6 5.4578 4.0473 -1.2964 14 7 5.9855 4.3635 -2.4621 15 6 6.6304 5.5073 -2.6264 16 6 6.7554 6.3714 -1.5499 17 6 6.1917 6.0017 -0.3389 18 7 5.5569 4.8438 -0.2512 19 6 2.1388 -1.1672 -0.0005 20 8 3.3557 -1.1673 -0.0010 21 6 1.4069 -2.4349 -0.0070 22 1 0.3269 -2.4349 -0.0070 23 6 2.1071 -3.6477 -0.0133 24 7 3.4138 -3.6478 -0.0139 25 14 1.1730 -5.2654 -0.0224 26 1 -0.2870 -4.9940 -0.0208 27 1 1.5321 -6.0376 -1.2390 28 1 1.5314 -6.0506 1.1860 29 1 -0.3633 0.0000 1.0277 30 1 -0.3633 0.8900 -0.5138 31 1 -0.3635 -0.8899 -0.5138 32 1 1.5699 2.0506 0.4274 33 1 3.1044 1.1646 0.5957 34 1 0.8904 1.0164 -2.6885 35 1 0.5524 2.4519 -1.6693 36 1 3.9773 3.1610 -3.4606 37 1 3.0580 4.5476 -2.8146 38 1 4.8261 2.3756 -0.1300 39 1 5.1538 2.0061 -1.8401 40 1 7.0571 5.7621 -3.5851 41 1 7.2793 7.3103 -1.6524 42 1 6.2690 6.6500 0.5214 43 1 3.8987 -4.4878 -0.0186 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000351954202.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 14:45:45 Heat of formation + Delta-G solvation = -17.972120 kcal Electronic energy + Delta-G solvation = -27580.950670 eV Core-core repulsion = 23576.202104 eV Total energy + Delta-G solvation = -4004.748566 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 322.155 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -47.52404 -41.18773 -38.96810 -37.27516 -34.09023 -33.83213 -33.20768 -32.44494 -30.75267 -29.91793 -26.82566 -26.36129 -25.77062 -24.68904 -23.84662 -22.68646 -20.93987 -20.43955 -18.96152 -17.67128 -17.12898 -16.74026 -16.43210 -16.08675 -15.58901 -15.51873 -15.09861 -14.84496 -14.47770 -14.25010 -14.07695 -13.88770 -13.71281 -13.60407 -13.36005 -13.03848 -12.30114 -12.20724 -11.80861 -11.64913 -11.51967 -11.48071 -11.36921 -11.12453 -10.99928 -10.98261 -10.85866 -10.69750 -10.64043 -10.32177 -10.16544 -10.06338 -9.74764 -9.35196 -8.87167 -8.39104 -7.60191 -7.21785 -6.20717 -4.65495 0.70406 0.95026 3.11450 3.20294 3.24051 3.46049 3.75752 4.00610 4.02472 4.14949 4.40112 4.41747 4.54875 4.66621 4.72669 4.76871 4.79607 4.90569 5.01830 5.17293 5.36929 5.39903 5.53873 5.67608 5.70525 5.75293 5.79681 5.88914 5.95940 6.07152 6.14644 6.22830 6.24691 6.35373 6.40186 6.57004 6.62568 6.84960 6.94344 7.01539 7.43794 7.63451 7.99182 8.13945 8.35167 9.01645 9.41603 10.56278 10.75235 Molecular weight = 322.15amu Principal moments of inertia in cm(-1) A = 0.016240 B = 0.003341 C = 0.002999 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1723.702438 B = 8377.510241 C = 9333.216208 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.100 3.900 2 N -0.646 5.646 3 C 0.148 3.852 4 C 0.058 3.942 5 H 0.071 0.929 6 C -0.135 4.135 7 C 0.079 3.921 8 H 0.090 0.910 9 F -0.211 7.211 10 C 0.014 3.986 11 N -0.500 5.500 12 C 0.113 3.887 13 C 0.334 3.666 14 N -0.516 5.516 15 C 0.146 3.854 16 C -0.237 4.237 17 C 0.147 3.853 18 N -0.498 5.498 19 C 0.556 3.444 20 O -0.577 6.577 21 C -0.542 4.542 22 H 0.072 0.928 23 C 0.087 3.913 24 N -0.767 5.767 25 Si 0.905 3.095 26 H -0.264 1.264 27 H -0.277 1.277 28 H -0.276 1.276 29 H 0.031 0.969 30 H 0.042 0.958 31 H 0.071 0.929 32 H 0.064 0.936 33 H 0.071 0.929 34 H 0.087 0.913 35 H 0.086 0.914 36 H 0.069 0.931 37 H 0.080 0.920 38 H 0.110 0.890 39 H 0.069 0.931 40 H 0.166 0.834 41 H 0.145 0.855 42 H 0.167 0.833 43 H 0.267 0.733 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.184 17.296 -5.330 18.230 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.044 4.044 2 N -0.385 5.385 3 C 0.023 3.977 4 C -0.051 4.051 5 H 0.089 0.911 6 C -0.173 4.173 7 C 0.042 3.958 8 H 0.108 0.892 9 F -0.192 7.192 10 C -0.115 4.115 11 N -0.226 5.226 12 C -0.017 4.017 13 C 0.066 3.934 14 N -0.231 5.231 15 C -0.020 4.020 16 C -0.259 4.259 17 C -0.019 4.019 18 N -0.212 5.212 19 C 0.362 3.638 20 O -0.459 6.459 21 C -0.579 4.579 22 H 0.091 0.909 23 C -0.132 4.132 24 N -0.395 5.395 25 Si 0.729 3.271 26 H -0.187 1.187 27 H -0.202 1.202 28 H -0.202 1.202 29 H 0.050 0.950 30 H 0.061 0.939 31 H 0.089 0.911 32 H 0.082 0.918 33 H 0.089 0.911 34 H 0.105 0.895 35 H 0.105 0.895 36 H 0.087 0.913 37 H 0.098 0.902 38 H 0.128 0.872 39 H 0.087 0.913 40 H 0.183 0.817 41 H 0.163 0.837 42 H 0.185 0.815 43 H 0.078 0.922 Dipole moment (debyes) X Y Z Total from point charges 2.329 16.684 -4.834 17.525 hybrid contribution 0.364 -0.251 -0.781 0.897 sum 2.693 16.433 -5.614 17.573 Atomic orbital electron populations 1.21456 0.82166 1.01079 0.99728 1.47964 1.05144 1.05198 1.80158 1.20738 0.97632 0.86577 0.92780 1.23314 0.93257 0.89318 0.99252 0.91073 1.23132 0.98573 0.99619 0.95986 1.22489 0.87277 0.86664 0.99371 0.89220 1.92800 1.68237 1.62953 1.95215 1.23457 0.96778 1.00879 0.90358 1.64794 1.08654 1.25164 1.23943 1.21026 0.87236 0.88993 1.04416 1.23097 0.90989 0.95449 0.83884 1.68303 1.10210 1.18721 1.25817 1.23218 0.91366 0.88389 0.99025 1.22899 1.04164 1.02943 0.95863 1.23301 0.89228 0.92206 0.97153 1.68314 1.15644 1.04496 1.32772 1.18256 0.86980 0.82259 0.76312 1.90593 1.13989 1.86325 1.55019 1.21050 0.93745 0.89264 1.53858 0.90947 1.25731 0.94594 1.00288 0.92623 1.70027 1.07032 1.27118 1.35367 0.86364 0.80565 0.81929 0.78205 1.18746 1.20224 1.20189 0.95031 0.93889 0.91064 0.91781 0.91070 0.89489 0.89505 0.91263 0.90193 0.87175 0.91329 0.81657 0.83675 0.81547 0.92218 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.10 1.79 9.84 59.85 0.59 2.38 16 2 N -0.65 -14.09 2.74 -183.25 -0.50 -14.59 16 3 C 0.15 2.84 5.04 -4.04 -0.02 2.82 16 4 C 0.06 1.00 2.54 -65.78 -0.17 0.83 16 5 H 0.07 1.44 7.95 -51.93 -0.41 1.03 16 6 C -0.13 -2.03 5.09 -24.87 -0.13 -2.16 16 7 C 0.08 1.09 4.77 -25.38 -0.12 0.97 16 8 H 0.09 1.10 8.14 -51.93 -0.42 0.68 16 9 F -0.21 -3.15 17.09 2.25 0.04 -3.11 16 10 C 0.01 0.20 5.44 -2.76 -0.01 0.18 16 11 N -0.50 -7.84 5.04 -224.06 -1.13 -8.97 16 12 C 0.11 1.77 5.16 -4.98 -0.03 1.75 16 13 C 0.33 4.82 6.44 -157.19 -1.01 3.80 16 14 N -0.52 -6.74 9.36 -10.72 -0.10 -6.84 16 15 C 0.15 1.39 11.31 -17.20 -0.19 1.20 16 16 C -0.24 -1.90 10.17 -39.31 -0.40 -2.30 16 17 C 0.15 1.46 11.30 -17.20 -0.19 1.27 16 18 N -0.50 -6.89 10.33 -10.72 -0.11 -7.00 16 19 C 0.56 15.23 7.57 -12.99 -0.10 15.13 16 20 O -0.58 -17.87 14.69 5.20 0.08 -17.79 16 21 C -0.54 -14.82 8.74 -35.63 -0.31 -15.13 16 22 H 0.07 1.82 5.99 -52.49 -0.31 1.50 16 23 C 0.09 2.38 5.50 -17.37 -0.10 2.29 16 24 N -0.77 -22.49 11.83 55.55 0.66 -21.83 16 25 Si 0.90 19.78 29.56 -169.99 -5.02 14.76 16 26 H -0.26 -5.55 7.11 56.52 0.40 -5.15 16 27 H -0.28 -5.95 7.11 56.52 0.40 -5.55 16 28 H -0.28 -5.97 7.11 56.52 0.40 -5.57 16 29 H 0.03 0.54 8.14 -51.93 -0.42 0.12 16 30 H 0.04 0.64 6.60 -51.93 -0.34 0.30 16 31 H 0.07 1.32 6.08 -51.93 -0.32 1.00 16 32 H 0.06 1.11 8.00 -51.93 -0.42 0.69 16 33 H 0.07 1.52 6.96 -51.93 -0.36 1.16 16 34 H 0.09 1.33 8.14 -51.93 -0.42 0.91 16 35 H 0.09 1.29 7.35 -51.93 -0.38 0.91 16 36 H 0.07 0.97 7.14 -51.93 -0.37 0.60 16 37 H 0.08 1.17 8.03 -51.93 -0.42 0.76 16 38 H 0.11 1.84 7.50 -51.93 -0.39 1.45 16 39 H 0.07 1.11 8.00 -51.93 -0.42 0.70 16 40 H 0.17 1.01 8.06 -52.49 -0.42 0.59 16 41 H 0.15 0.65 8.06 -52.48 -0.42 0.23 16 42 H 0.17 1.09 8.06 -52.49 -0.42 0.67 16 43 H 0.27 7.13 8.29 -40.82 -0.34 6.79 16 LS Contribution 357.38 15.07 5.39 5.39 Total: -1.00 -34.46 357.38 -8.71 -43.17 By element: Atomic # 1 Polarization: 9.61 SS G_CDS: -5.81 Total: 3.80 kcal Atomic # 6 Polarization: 15.22 SS G_CDS: -2.19 Total: 13.03 kcal Atomic # 7 Polarization: -58.06 SS G_CDS: -1.19 Total: -59.24 kcal Atomic # 8 Polarization: -17.87 SS G_CDS: 0.08 Total: -17.79 kcal Atomic # 9 Polarization: -3.15 SS G_CDS: 0.04 Total: -3.11 kcal Atomic # 14 Polarization: 19.78 SS G_CDS: -5.02 Total: 14.76 kcal Total LS contribution 5.39 Total: 5.39 kcal Total: -34.46 -8.71 -43.17 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000351954202.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 25.195 kcal (2) G-P(sol) polarization free energy of solvation -34.456 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -9.261 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.711 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -43.167 kcal (6) G-S(sol) free energy of system = (1) + (5) -17.972 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds