Wall clock time and date at job start Fri Apr 10 2020 14:47:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.53001 * 109.47073 * 2 1 4 4 C 1.52994 * 109.47161 * 120.00455 * 2 1 3 5 5 C 1.53001 * 109.47105 * 175.00124 * 4 2 1 6 6 N 1.46509 * 109.46810 * 179.97438 * 5 4 2 7 7 C 1.46495 * 119.99827 * 269.99749 * 6 5 4 8 8 C 1.50699 * 109.47225 * 94.55066 * 7 6 5 9 9 H 1.08006 * 119.99653 * 359.97438 * 8 7 6 10 10 C 1.37872 * 120.00114 * 180.02562 * 8 7 6 11 11 N 1.31516 * 120.00084 * 179.97438 * 10 8 7 12 12 Si 1.86803 * 120.00127 * 359.97438 * 10 8 7 13 13 H 1.48498 * 109.46554 * 90.00503 * 12 10 8 14 14 H 1.48502 * 109.47042 * 210.00331 * 12 10 8 15 15 H 1.48493 * 109.47006 * 330.00805 * 12 10 8 16 16 C 1.34777 * 119.99741 * 90.00257 * 6 5 4 17 17 O 1.21618 * 119.99950 * 354.61559 * 16 6 5 18 18 C 1.47096 * 119.99783 * 174.62015 * 16 6 5 19 19 C 1.31553 * 118.10607 * 82.15308 * 18 16 6 20 20 C 1.50103 * 123.78687 * 179.30290 * 19 18 16 21 21 H 1.09002 * 109.22155 * 137.73652 * 20 19 18 22 22 O 1.42904 * 109.44628 * 257.43533 * 20 19 18 23 23 C 1.53006 * 110.07560 * 17.65623 * 20 19 18 24 24 H 1.09000 * 109.79256 * 69.84790 * 23 20 19 25 25 O 1.42902 * 109.63097 * 190.33957 * 23 20 19 26 26 C 1.53363 * 108.50879 * 310.04360 * 23 20 19 27 27 H 1.08995 * 109.79510 * 308.23236 * 26 23 20 28 28 O 1.42904 * 109.63114 * 187.74052 * 26 23 20 29 29 C 1.50100 * 118.10532 * 262.42097 * 18 16 6 30 30 H 1.08991 * 109.47053 * 299.99753 * 1 2 3 31 31 H 1.09009 * 109.47080 * 59.99839 * 1 2 3 32 32 H 1.08996 * 109.47369 * 179.97438 * 1 2 3 33 33 H 1.09001 * 109.47090 * 240.00367 * 2 1 3 34 34 H 1.09001 * 109.46863 * 60.00228 * 3 2 1 35 35 H 1.09001 * 109.47359 * 179.97438 * 3 2 1 36 36 H 1.08997 * 109.47574 * 300.00194 * 3 2 1 37 37 H 1.08996 * 109.47435 * 54.99775 * 4 2 1 38 38 H 1.09004 * 109.47212 * 294.99888 * 4 2 1 39 39 H 1.08997 * 109.47003 * 60.00030 * 5 4 2 40 40 H 1.08994 * 109.47279 * 299.99537 * 5 4 2 41 41 H 1.08998 * 109.47183 * 214.54884 * 7 6 5 42 42 H 1.09006 * 109.47318 * 334.54744 * 7 6 5 43 43 H 0.97000 * 120.00571 * 179.97438 * 11 10 8 44 44 H 1.07998 * 118.10263 * 359.58065 * 19 18 16 45 45 H 0.96699 * 113.99616 * 300.66049 * 22 20 19 46 46 H 0.96696 * 113.99623 * 299.02104 * 25 23 20 47 47 H 0.96702 * 114.00040 * 180.98306 * 28 26 23 48 48 H 1.09000 * 109.35566 * 317.37157 * 29 18 16 49 49 H 1.08996 * 109.36264 * 76.96381 * 29 18 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7213 1.2491 5 6 3.5648 -0.8311 1.1878 6 7 4.0532 -1.5213 2.3843 7 6 4.4016 -0.7531 3.5821 8 6 3.2188 -0.7132 4.5150 9 1 2.2992 -1.2100 4.2426 10 6 3.3100 -0.0416 5.7156 11 7 2.2776 -0.0064 6.5295 12 14 4.9002 0.8182 6.1864 13 1 4.8718 2.2175 5.6901 14 1 5.0432 0.8200 7.6645 15 1 6.0495 0.1008 5.5787 16 6 4.1820 -2.8629 2.3830 17 8 3.8015 -3.5093 1.4256 18 6 4.7826 -3.5452 3.5394 19 6 4.0161 -3.7933 4.5794 20 6 4.4917 -4.4945 5.8185 21 1 4.0879 -3.9878 6.6950 22 8 4.0366 -5.8491 5.8029 23 6 6.0204 -4.4737 5.8799 24 1 6.3682 -3.4587 6.0722 25 8 6.4709 -5.3412 6.9222 26 6 6.5684 -4.9595 4.5324 27 1 6.1069 -5.9108 4.2676 28 8 7.9855 -5.1215 4.6207 29 6 6.2361 -3.9127 3.4671 30 1 -0.3633 0.5138 0.8899 31 1 -0.3634 0.5139 -0.8900 32 1 -0.3634 -1.0276 -0.0005 33 1 1.8933 -0.5138 -0.8900 34 1 1.6767 1.9563 0.8900 35 1 3.1300 1.4426 0.0005 36 1 1.6767 1.9564 -0.8899 37 1 1.6054 -1.7198 1.2950 38 1 1.7517 -0.1584 2.1369 39 1 3.9994 0.1675 1.1420 40 1 3.8532 -1.3940 0.3002 41 1 5.2449 -1.2266 4.0848 42 1 4.6731 0.2630 3.2959 43 1 2.3419 0.4658 7.3744 44 1 2.9841 -3.4780 4.5375 45 1 3.0747 -5.9404 5.7644 46 1 6.1603 -5.0915 7.8033 47 1 8.4001 -5.4131 3.7972 48 1 6.4574 -4.3189 2.4800 49 1 6.8426 -3.0226 3.6336 RHF calculation, no. of doubly occupied orbitals= 63 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000597144375.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 14:47:51 Heat of formation + Delta-G solvation = -181.818508 kcal Electronic energy + Delta-G solvation = -30262.728792 eV Core-core repulsion = 26189.701248 eV Total energy + Delta-G solvation = -4073.027544 eV No. of doubly occupied orbitals = 63 Molecular weight (most abundant/longest-lived isotopes) = 327.192 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -40.10385 -38.83482 -36.58985 -36.50185 -35.51769 -34.86901 -34.19288 -32.60003 -29.90272 -29.06682 -28.74799 -27.49364 -26.95557 -23.96193 -22.99890 -22.63085 -21.83691 -19.73787 -19.58090 -18.29621 -17.31044 -17.18231 -17.03972 -16.62671 -15.90039 -15.87215 -15.28827 -14.85877 -14.48293 -14.22951 -14.10737 -13.83286 -13.72042 -13.36534 -13.22752 -12.96759 -12.91307 -12.77429 -12.45169 -12.37099 -12.04623 -11.99240 -11.92751 -11.65126 -11.42529 -11.22017 -10.97379 -10.85840 -10.59496 -10.50935 -10.44804 -10.29699 -10.24778 -10.07318 -9.89990 -9.76124 -9.64696 -9.13603 -8.81393 -8.76661 -7.86395 -6.31090 -4.31662 2.17986 3.09039 3.13704 3.17335 3.20326 3.74166 4.06014 4.17661 4.19461 4.56628 4.78683 4.98497 5.01116 5.12611 5.15003 5.18189 5.20865 5.23695 5.29297 5.53301 5.58673 5.70106 5.75091 5.78657 5.80768 5.85676 5.93566 5.95164 6.00470 6.04969 6.12736 6.17759 6.22502 6.34891 6.39414 6.47778 6.57162 6.66540 6.71212 6.88743 6.96207 7.26089 7.34568 7.67121 7.71686 7.84354 8.00254 8.29036 8.69911 8.78191 9.28656 10.80753 Molecular weight = 327.19amu Principal moments of inertia in cm(-1) A = 0.011011 B = 0.004848 C = 0.003987 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2542.285596 B = 5774.351072 C = 7020.434786 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.145 4.145 2 C -0.093 4.093 3 C -0.148 4.148 4 C -0.128 4.128 5 C 0.122 3.878 6 N -0.585 5.585 7 C 0.208 3.792 8 C -0.532 4.532 9 H 0.079 0.921 10 C 0.079 3.921 11 N -0.889 5.889 12 Si 0.863 3.137 13 H -0.274 1.274 14 H -0.283 1.283 15 H -0.264 1.264 16 C 0.558 3.442 17 O -0.563 6.563 18 C -0.127 4.127 19 C -0.126 4.126 20 C 0.111 3.889 21 H 0.080 0.920 22 O -0.549 6.549 23 C 0.123 3.877 24 H 0.077 0.923 25 O -0.544 6.544 26 C 0.121 3.879 27 H 0.074 0.926 28 O -0.555 6.555 29 C -0.105 4.105 30 H 0.056 0.944 31 H 0.048 0.952 32 H 0.052 0.948 33 H 0.064 0.936 34 H 0.057 0.943 35 H 0.054 0.946 36 H 0.047 0.953 37 H 0.060 0.940 38 H 0.081 0.919 39 H 0.072 0.928 40 H 0.068 0.932 41 H 0.033 0.967 42 H 0.029 0.971 43 H 0.266 0.734 44 H 0.127 0.873 45 H 0.379 0.621 46 H 0.374 0.626 47 H 0.374 0.626 48 H 0.083 0.917 49 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.986 -2.991 -5.542 7.453 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.202 4.202 2 C -0.112 4.112 3 C -0.205 4.205 4 C -0.166 4.166 5 C 0.000 4.000 6 N -0.314 5.314 7 C 0.087 3.913 8 C -0.570 4.570 9 H 0.097 0.903 10 C -0.124 4.124 11 N -0.526 5.526 12 Si 0.690 3.310 13 H -0.199 1.199 14 H -0.208 1.208 15 H -0.188 1.188 16 C 0.346 3.654 17 O -0.443 6.443 18 C -0.130 4.130 19 C -0.145 4.145 20 C 0.052 3.948 21 H 0.098 0.902 22 O -0.355 6.355 23 C 0.064 3.936 24 H 0.095 0.905 25 O -0.349 6.349 26 C 0.062 3.938 27 H 0.092 0.908 28 O -0.359 6.359 29 C -0.143 4.143 30 H 0.075 0.925 31 H 0.067 0.933 32 H 0.071 0.929 33 H 0.082 0.918 34 H 0.077 0.923 35 H 0.073 0.927 36 H 0.066 0.934 37 H 0.079 0.921 38 H 0.100 0.900 39 H 0.090 0.910 40 H 0.087 0.913 41 H 0.051 0.949 42 H 0.047 0.953 43 H 0.076 0.924 44 H 0.145 0.855 45 H 0.226 0.774 46 H 0.221 0.779 47 H 0.221 0.779 48 H 0.101 0.899 49 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges 4.555 -3.436 -5.714 8.075 hybrid contribution -0.295 1.176 0.314 1.252 sum 4.260 -2.260 -5.399 7.239 Atomic orbital electron populations 1.21808 0.95513 1.01515 1.01358 1.21054 0.95602 0.96135 0.98439 1.21894 1.01003 0.96182 1.01450 1.21994 0.95500 1.00984 0.98168 1.21418 0.94549 0.96531 0.87552 1.48004 1.62824 1.05779 1.14842 1.19837 0.97216 0.91317 0.82923 1.21302 0.98972 1.34993 1.01722 0.90281 1.24813 0.95937 0.95575 0.96095 1.69876 1.29734 1.42337 1.10688 0.87048 0.84638 0.80949 0.78412 1.19907 1.20827 1.18835 1.18429 0.78373 0.82215 0.86430 1.90728 1.51624 1.65643 1.36340 1.20409 0.95698 1.01796 0.95132 1.23036 1.01535 0.96978 0.92939 1.21316 0.94579 0.82955 0.95997 0.90236 1.86593 1.27252 1.24450 1.97224 1.21895 0.90054 0.94006 0.87691 0.90515 1.86576 1.75708 1.54733 1.17840 1.21717 0.81530 0.97689 0.92872 0.90830 1.86588 1.19720 1.90803 1.38816 1.21046 0.92917 1.00175 1.00122 0.92523 0.93256 0.92923 0.91756 0.92349 0.92657 0.93356 0.92077 0.90044 0.90983 0.91313 0.94947 0.95269 0.92372 0.85512 0.77422 0.77942 0.77936 0.89882 0.89401 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -1.85 9.19 37.16 0.34 -1.51 16 2 C -0.09 -1.28 2.92 -90.62 -0.26 -1.54 16 3 C -0.15 -1.86 8.95 37.16 0.33 -1.52 16 4 C -0.13 -2.17 5.01 -26.73 -0.13 -2.31 16 5 C 0.12 2.10 5.16 -4.04 -0.02 2.08 16 6 N -0.59 -11.41 2.47 -176.46 -0.44 -11.85 16 7 C 0.21 4.34 4.02 -5.20 -0.02 4.32 16 8 C -0.53 -12.78 8.35 -34.44 -0.29 -13.06 16 9 H 0.08 2.13 8.02 -52.48 -0.42 1.71 16 10 C 0.08 1.99 5.47 -17.82 -0.10 1.90 16 11 N -0.89 -24.07 13.96 55.43 0.77 -23.29 16 12 Si 0.86 18.87 27.47 -169.99 -4.67 14.20 16 13 H -0.27 -5.99 7.11 56.52 0.40 -5.58 16 14 H -0.28 -6.25 7.11 56.52 0.40 -5.85 16 15 H -0.26 -5.49 6.54 56.52 0.37 -5.12 16 16 C 0.56 11.18 6.76 -12.67 -0.09 11.09 16 17 O -0.56 -12.49 16.74 5.26 0.09 -12.40 16 18 C -0.13 -2.28 3.80 -103.17 -0.39 -2.67 16 19 C -0.13 -2.22 7.96 -36.45 -0.29 -2.51 16 20 C 0.11 1.72 3.52 -28.17 -0.10 1.62 16 21 H 0.08 1.21 8.14 -51.93 -0.42 0.78 16 22 O -0.55 -8.11 12.57 -51.12 -0.64 -8.75 16 23 C 0.12 1.94 3.04 -26.54 -0.08 1.86 16 24 H 0.08 1.23 8.12 -51.93 -0.42 0.81 16 25 O -0.54 -8.45 12.78 -60.81 -0.78 -9.23 16 26 C 0.12 1.85 3.24 -26.54 -0.09 1.76 16 27 H 0.07 1.18 7.77 -51.93 -0.40 0.78 16 28 O -0.55 -7.99 13.10 -49.20 -0.64 -8.63 16 29 C -0.10 -1.60 5.42 -28.17 -0.15 -1.75 16 30 H 0.06 0.75 8.14 -51.93 -0.42 0.33 16 31 H 0.05 0.54 8.14 -51.92 -0.42 0.12 16 32 H 0.05 0.68 8.14 -51.93 -0.42 0.25 16 33 H 0.06 0.85 8.14 -51.93 -0.42 0.42 16 34 H 0.06 0.78 8.14 -51.93 -0.42 0.36 16 35 H 0.05 0.67 6.56 -51.93 -0.34 0.33 16 36 H 0.05 0.52 8.14 -51.93 -0.42 0.10 16 37 H 0.06 1.15 8.14 -51.93 -0.42 0.72 16 38 H 0.08 1.57 7.92 -51.93 -0.41 1.16 16 39 H 0.07 1.12 6.28 -51.93 -0.33 0.80 16 40 H 0.07 1.17 7.50 -51.93 -0.39 0.78 16 41 H 0.03 0.68 6.02 -51.93 -0.31 0.37 16 42 H 0.03 0.60 7.27 -51.93 -0.38 0.22 16 43 H 0.27 6.85 8.31 -40.82 -0.34 6.51 16 44 H 0.13 2.48 7.53 -52.49 -0.40 2.09 16 45 H 0.38 4.23 9.07 45.56 0.41 4.64 16 46 H 0.37 4.25 9.09 45.56 0.41 4.67 16 47 H 0.37 3.59 9.08 45.56 0.41 4.00 16 48 H 0.08 1.17 8.14 -51.93 -0.42 0.74 16 49 H 0.09 1.32 8.14 -51.93 -0.42 0.90 16 LS Contribution 392.61 15.07 5.92 5.92 Total: -1.00 -31.56 392.61 -7.68 -39.24 By element: Atomic # 1 Polarization: 23.00 SS G_CDS: -5.95 Total: 17.05 kcal Atomic # 6 Polarization: -0.92 SS G_CDS: -1.34 Total: -2.26 kcal Atomic # 7 Polarization: -35.48 SS G_CDS: 0.34 Total: -35.14 kcal Atomic # 8 Polarization: -37.04 SS G_CDS: -1.98 Total: -39.01 kcal Atomic # 14 Polarization: 18.87 SS G_CDS: -4.67 Total: 14.20 kcal Total LS contribution 5.92 Total: 5.92 kcal Total: -31.56 -7.68 -39.24 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000597144375.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -142.582 kcal (2) G-P(sol) polarization free energy of solvation -31.556 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -174.139 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.680 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.236 kcal (6) G-S(sol) free energy of system = (1) + (5) -181.819 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds