Wall clock time and date at job start Fri Apr 10 2020 14:51:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 C 1.53003 * 109.47591 * 2 1 4 4 N 1.46497 * 109.46743 * 180.02562 * 3 2 1 5 5 C 1.36902 * 120.00089 * 93.74907 * 4 3 2 6 6 H 1.07998 * 120.00029 * 211.67043 * 5 4 3 7 7 C 1.39026 * 119.99893 * 31.66763 * 5 4 3 8 8 N 1.31381 * 120.00284 * 19.21369 * 7 5 4 9 9 Si 1.86800 * 120.00205 * 199.21447 * 7 5 4 10 10 H 1.48497 * 109.46899 * 359.97438 * 9 7 5 11 11 H 1.48502 * 109.47275 * 120.00019 * 9 7 5 12 12 H 1.48505 * 109.47264 * 240.00253 * 9 7 5 13 13 C 1.34777 * 120.00221 * 273.73684 * 4 3 2 14 14 O 1.21618 * 119.99896 * 174.22410 * 13 4 3 15 15 C 1.47548 * 119.99842 * 354.23318 * 13 4 3 16 16 C 1.41581 * 126.44849 * 172.10534 * 15 13 4 17 17 C 1.35342 * 105.55619 * 179.97438 * 16 15 13 18 18 N 1.35869 * 107.13797 * 359.97438 * 17 16 15 19 19 C 1.40124 * 124.94843 * 180.02562 * 18 17 16 20 20 C 1.38851 * 120.07663 * 352.34161 * 19 18 17 21 21 C 1.38100 * 119.94240 * 179.76796 * 20 19 18 22 22 C 1.38302 * 120.09379 * 0.50727 * 21 20 19 23 23 C 1.38251 * 120.15145 * 359.74803 * 22 21 20 24 24 C 1.38241 * 120.05503 * 359.97438 * 23 22 21 25 25 Cl 1.73599 * 120.04910 * 179.97438 * 24 23 22 26 26 N 1.28474 * 110.09357 * 359.75550 * 18 17 16 27 27 H 1.08992 * 109.47720 * 181.54034 * 1 2 3 28 28 H 1.09000 * 109.47352 * 301.54674 * 1 2 3 29 29 H 1.09009 * 109.46821 * 61.54046 * 1 2 3 30 30 H 1.09007 * 109.46972 * 239.99685 * 2 1 3 31 31 H 1.08999 * 109.46938 * 120.00291 * 2 1 3 32 32 H 1.08994 * 109.46979 * 60.06890 * 3 2 1 33 33 H 1.08995 * 109.46849 * 300.06558 * 3 2 1 34 34 H 0.96995 * 120.00747 * 180.02562 * 8 7 5 35 35 H 1.08003 * 127.22196 * 359.97438 * 16 15 13 36 36 H 1.07998 * 126.42655 * 179.97438 * 17 16 15 37 37 H 1.08003 * 120.03031 * 359.97438 * 20 19 18 38 38 H 1.08002 * 119.95554 * 180.23443 * 21 20 19 39 39 H 1.08006 * 119.92658 * 179.76863 * 22 21 20 40 40 H 1.08002 * 119.97218 * 180.02562 * 23 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4425 0.0000 4 7 3.5051 1.4423 -0.0006 5 6 4.1891 1.5199 -1.1840 6 1 5.1483 1.0343 -1.2860 7 6 3.6489 2.2237 -2.2543 8 7 2.7030 3.1115 -2.0464 9 14 4.2677 1.9071 -3.9881 10 1 5.3282 0.8682 -3.9531 11 1 3.1431 1.4389 -4.8374 12 1 4.8244 3.1631 -4.5521 13 6 4.1795 1.3659 1.1638 14 8 5.3910 1.2598 1.1589 15 6 3.4479 1.4109 2.4443 16 6 3.9919 1.1871 3.7322 17 6 2.9578 1.3319 4.5932 18 7 1.8580 1.6270 3.8520 19 6 0.5767 1.8536 4.3720 20 6 0.3224 1.6289 5.7184 21 6 -0.9402 1.8577 6.2290 22 6 -1.9542 2.3001 5.3991 23 6 -1.7067 2.5200 4.0568 24 6 -0.4436 2.2985 3.5403 25 17 -0.1332 2.5741 1.8546 26 7 2.1653 1.6736 2.6054 27 1 -0.3634 -1.0272 0.0276 28 1 -0.3634 0.5377 0.8758 29 1 -0.3633 0.4898 -0.9036 30 1 1.8933 -0.5139 -0.8900 31 1 1.8933 -0.5139 0.8900 32 1 1.6778 1.9559 0.8906 33 1 1.6758 1.9566 -0.8894 34 1 2.3258 3.6024 -2.7931 35 1 5.0170 0.9504 3.9762 36 1 2.9991 1.2317 5.6677 37 1 1.1122 1.2787 6.3666 38 1 -1.1372 1.6866 7.2770 39 1 -2.9416 2.4746 5.8005 40 1 -2.5005 2.8659 3.4113 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000050601521.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 14:51:38 Heat of formation + Delta-G solvation = 100.450393 kcal Electronic energy + Delta-G solvation = -26946.645707 eV Core-core repulsion = 23176.735378 eV Total energy + Delta-G solvation = -3769.910329 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 333.098 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -42.46636 -39.35996 -38.13582 -36.33131 -35.14406 -33.52783 -32.58472 -31.38000 -31.12125 -30.17537 -29.17069 -25.92215 -24.94499 -23.64454 -23.30800 -21.59351 -20.81008 -20.50917 -19.10506 -18.22955 -16.92189 -16.57765 -16.01880 -15.83838 -15.39861 -14.99192 -14.61349 -14.26745 -14.15785 -13.79781 -13.59469 -13.44267 -13.21646 -13.09211 -12.56009 -12.35397 -12.26108 -11.90795 -11.66151 -11.51644 -11.44681 -11.26531 -11.03275 -10.53350 -10.46979 -10.20998 -10.06107 -9.96094 -9.70359 -9.46855 -9.00565 -8.86250 -8.66677 -8.57227 -8.05385 -7.40274 -6.26543 -3.88728 0.61039 0.87775 2.19989 2.34184 2.60855 2.67667 3.21607 3.28342 3.35639 3.41614 4.15595 4.29315 4.47287 4.53099 4.68998 4.87232 4.92529 4.94713 5.12657 5.21599 5.31109 5.44096 5.73369 5.84114 5.87058 5.89553 5.93858 6.03219 6.06089 6.16120 6.30531 6.34416 6.59438 6.61318 6.79334 6.83946 6.92520 7.10977 7.35675 7.54437 7.74804 8.26289 8.39076 8.61748 9.19857 9.46922 10.06776 10.71702 Molecular weight = 333.10amu Principal moments of inertia in cm(-1) A = 0.017291 B = 0.004542 C = 0.003877 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1618.978506 B = 6162.696690 C = 7220.023654 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C -0.127 4.127 3 C 0.060 3.940 4 N -0.413 5.413 5 C -0.301 4.301 6 H 0.098 0.902 7 C 0.034 3.966 8 N -0.863 5.863 9 Si 0.922 3.078 10 H -0.266 1.266 11 H -0.280 1.280 12 H -0.281 1.281 13 C 0.520 3.480 14 O -0.581 6.581 15 C 0.034 3.966 16 C -0.175 4.175 17 C -0.031 4.031 18 N -0.259 5.259 19 C 0.162 3.838 20 C -0.128 4.128 21 C -0.095 4.095 22 C -0.120 4.120 23 C -0.092 4.092 24 C -0.054 4.054 25 Cl 0.005 6.995 26 N -0.247 5.247 27 H 0.041 0.959 28 H 0.060 0.940 29 H 0.049 0.951 30 H 0.054 0.946 31 H 0.041 0.959 32 H 0.108 0.892 33 H 0.118 0.882 34 H 0.268 0.732 35 H 0.162 0.838 36 H 0.177 0.823 37 H 0.139 0.861 38 H 0.136 0.864 39 H 0.135 0.865 40 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.791 -1.881 15.484 20.171 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C -0.165 4.165 3 C -0.064 4.064 4 N -0.129 5.129 5 C -0.429 4.429 6 H 0.115 0.885 7 C -0.170 4.170 8 N -0.501 5.501 9 Si 0.748 3.252 10 H -0.190 1.190 11 H -0.206 1.206 12 H -0.207 1.207 13 C 0.307 3.693 14 O -0.464 6.464 15 C -0.129 4.129 16 C -0.202 4.202 17 C -0.169 4.169 18 N -0.039 5.039 19 C 0.069 3.931 20 C -0.149 4.149 21 C -0.114 4.114 22 C -0.139 4.139 23 C -0.111 4.111 24 C -0.083 4.083 25 Cl 0.034 6.966 26 N -0.077 5.077 27 H 0.060 0.940 28 H 0.078 0.922 29 H 0.068 0.932 30 H 0.073 0.927 31 H 0.060 0.940 32 H 0.125 0.875 33 H 0.135 0.865 34 H 0.078 0.922 35 H 0.180 0.820 36 H 0.194 0.806 37 H 0.157 0.843 38 H 0.154 0.846 39 H 0.153 0.847 40 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -13.268 -1.507 14.612 19.794 hybrid contribution 0.884 -0.294 -0.417 1.020 sum -12.384 -1.801 14.194 18.923 Atomic orbital electron populations 1.21842 0.96705 1.00330 1.01940 1.21765 0.94748 0.99504 1.00518 1.22757 0.80879 0.95323 1.07412 1.43439 1.05666 1.59725 1.04082 1.19655 1.05122 1.30756 0.87403 0.88464 1.25374 0.97053 0.94074 1.00518 1.69806 1.27395 1.20979 1.31952 0.85938 0.78847 0.78590 0.81803 1.19028 1.20560 1.20678 1.17040 0.86159 0.84606 0.81542 1.90610 1.13104 1.56470 1.86253 1.22996 0.89762 1.03458 0.96672 1.21857 1.00141 1.07035 0.91163 1.22854 0.86359 1.08793 0.98933 1.43020 1.05978 1.49998 1.04905 1.17482 0.81955 1.01046 0.92619 1.20842 0.98845 1.03044 0.92137 1.21016 0.91793 0.98276 1.00326 1.21182 0.99863 0.99971 0.92901 1.21073 0.94692 0.99351 0.96031 1.20997 0.94063 1.03866 0.89328 1.98491 1.94620 1.93632 1.09814 1.74435 1.16263 1.20344 0.96688 0.94014 0.92161 0.93228 0.92743 0.93985 0.87507 0.86488 0.92163 0.82025 0.80622 0.84326 0.84593 0.84716 0.84100 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -2.68 9.76 37.16 0.36 -2.32 16 2 C -0.13 -2.73 6.17 -26.73 -0.16 -2.89 16 3 C 0.06 1.46 4.34 -4.04 -0.02 1.45 16 4 N -0.41 -11.38 2.57 -115.99 -0.30 -11.67 16 5 C -0.30 -8.68 9.08 -15.00 -0.14 -8.82 16 6 H 0.10 2.90 7.58 -52.49 -0.40 2.50 16 7 C 0.03 0.92 5.05 -17.45 -0.09 0.83 16 8 N -0.86 -23.77 10.96 55.50 0.61 -23.16 16 9 Si 0.92 21.04 29.59 -169.99 -5.03 16.01 16 10 H -0.27 -6.05 7.11 56.52 0.40 -5.65 16 11 H -0.28 -6.21 7.11 56.52 0.40 -5.81 16 12 H -0.28 -6.36 7.11 56.52 0.40 -5.96 16 13 C 0.52 14.12 7.60 -12.46 -0.09 14.03 16 14 O -0.58 -17.20 16.71 5.26 0.09 -17.11 16 15 C 0.03 0.77 6.84 -82.76 -0.57 0.20 16 16 C -0.17 -3.19 10.81 -39.34 -0.43 -3.62 16 17 C -0.03 -0.46 10.77 -16.80 -0.18 -0.64 16 18 N -0.26 -4.33 3.52 -10.53 -0.04 -4.37 16 19 C 0.16 2.25 6.64 -83.57 -0.56 1.70 16 20 C -0.13 -1.26 9.43 -39.41 -0.37 -1.63 16 21 C -0.10 -0.72 10.04 -39.61 -0.40 -1.12 16 22 C -0.12 -0.94 10.04 -39.55 -0.40 -1.34 16 23 C -0.09 -0.94 9.82 -39.58 -0.39 -1.33 16 24 C -0.05 -0.74 6.34 -39.31 -0.25 -0.99 16 25 Cl 0.00 0.08 20.53 -51.86 -1.06 -0.99 16 26 N -0.25 -5.05 6.00 33.42 0.20 -4.85 16 27 H 0.04 0.65 8.14 -51.93 -0.42 0.23 16 28 H 0.06 1.03 5.07 -51.93 -0.26 0.77 16 29 H 0.05 0.87 8.14 -51.92 -0.42 0.45 16 30 H 0.05 1.22 8.14 -51.93 -0.42 0.79 16 31 H 0.04 0.92 8.14 -51.93 -0.42 0.49 16 32 H 0.11 2.47 1.87 -52.37 -0.10 2.37 16 33 H 0.12 3.10 5.02 -51.93 -0.26 2.84 16 34 H 0.27 6.89 8.31 -40.82 -0.34 6.55 16 35 H 0.16 2.70 8.06 -52.48 -0.42 2.28 16 36 H 0.18 1.70 7.02 -52.49 -0.37 1.33 16 37 H 0.14 1.03 6.70 -52.48 -0.35 0.68 16 38 H 0.14 0.62 8.06 -52.49 -0.42 0.19 16 39 H 0.13 0.66 8.06 -52.48 -0.42 0.23 16 40 H 0.14 1.18 8.06 -52.49 -0.42 0.76 16 LS Contribution 340.29 15.07 5.13 5.13 Total: -1.00 -34.12 340.29 -8.33 -42.46 By element: Atomic # 1 Polarization: 9.30 SS G_CDS: -4.26 Total: 5.05 kcal Atomic # 6 Polarization: -2.82 SS G_CDS: -3.67 Total: -6.49 kcal Atomic # 7 Polarization: -44.53 SS G_CDS: 0.47 Total: -44.06 kcal Atomic # 8 Polarization: -17.20 SS G_CDS: 0.09 Total: -17.11 kcal Atomic # 14 Polarization: 21.04 SS G_CDS: -5.03 Total: 16.01 kcal Atomic # 17 Polarization: 0.08 SS G_CDS: -1.06 Total: -0.99 kcal Total LS contribution 5.13 Total: 5.13 kcal Total: -34.12 -8.33 -42.46 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000050601521.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 142.906 kcal (2) G-P(sol) polarization free energy of solvation -34.123 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 108.783 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.333 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.456 kcal (6) G-S(sol) free energy of system = (1) + (5) 100.450 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds