Wall clock time and date at job start Fri Apr 10 2020 14:51:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 H 1.09000 * 109.47408 * 2 1 4 4 N 1.46496 * 109.47387 * 120.00538 * 2 1 3 5 5 C 1.34774 * 120.00012 * 274.99885 * 4 2 1 6 6 O 1.21682 * 119.99867 * 359.97438 * 5 4 2 7 7 C 1.46375 * 120.00122 * 179.97438 * 5 4 2 8 8 H 1.08009 * 119.99909 * 0.02562 * 7 5 4 9 9 C 1.40040 * 120.00194 * 179.97438 * 7 5 4 10 10 N 1.30672 * 119.99940 * 0.02562 * 9 7 5 11 11 Si 1.86803 * 120.00157 * 179.97438 * 9 7 5 12 12 H 1.48501 * 109.47264 * 0.02562 * 11 9 7 13 13 H 1.48498 * 109.46974 * 120.00071 * 11 9 7 14 14 H 1.48496 * 109.47628 * 240.00278 * 11 9 7 15 15 C 1.53005 * 109.46722 * 240.00514 * 2 1 3 16 16 H 1.09000 * 109.47198 * 299.99578 * 15 2 1 17 17 C 1.50703 * 109.47091 * 60.00014 * 15 2 1 18 18 C 1.38235 * 120.00726 * 53.29150 * 17 15 2 19 19 C 1.38224 * 120.01130 * 179.97438 * 18 17 15 20 20 C 1.38255 * 120.02585 * 0.04067 * 19 18 17 21 21 C 1.38196 * 120.01549 * 359.97438 * 20 19 18 22 22 C 1.38333 * 120.00339 * 233.01491 * 17 15 2 23 23 Cl 1.73599 * 120.01353 * 359.97438 * 22 17 15 24 24 N 1.46499 * 109.46999 * 179.97438 * 15 2 1 25 25 C 1.34940 * 126.04246 * 275.90880 * 24 15 2 26 26 C 1.35316 * 107.75091 * 179.97438 * 25 24 15 27 27 C 1.39868 * 107.91646 * 359.97438 * 26 25 24 28 28 N 1.30836 * 108.20624 * 359.74622 * 27 26 25 29 29 H 1.08992 * 109.47352 * 59.99662 * 1 2 3 30 30 H 1.09000 * 109.46939 * 179.97438 * 1 2 3 31 31 H 1.09004 * 109.46878 * 299.99572 * 1 2 3 32 32 H 0.97006 * 120.00008 * 94.99713 * 4 2 1 33 33 H 0.97003 * 119.99988 * 179.97438 * 10 9 7 34 34 H 1.08001 * 119.99372 * 359.97438 * 18 17 15 35 35 H 1.07998 * 119.98208 * 180.02562 * 19 18 17 36 36 H 1.08005 * 119.99614 * 179.97438 * 20 19 18 37 37 H 1.08005 * 120.00470 * 180.02562 * 21 20 19 38 38 H 1.08005 * 126.12662 * 359.94869 * 25 24 15 39 39 H 1.07997 * 126.04497 * 179.97438 * 26 25 24 40 40 H 1.08005 * 125.89664 * 180.02562 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8934 1.0276 0.0000 4 7 2.0184 -0.6907 1.1961 5 6 2.1472 -0.0185 2.3571 6 8 1.8582 1.1623 2.4117 7 6 2.6346 -0.7087 3.5523 8 1 2.8915 -1.7567 3.5037 9 6 2.7689 -0.0101 4.7585 10 7 2.4586 1.2579 4.8172 11 14 3.3903 -0.8911 6.2840 12 1 3.6694 -2.3122 5.9557 13 1 4.6372 -0.2392 6.7587 14 1 2.3590 -0.8223 7.3501 15 6 2.0399 -0.7212 -1.2494 16 1 1.6766 -1.7489 -1.2494 17 6 1.5375 -0.0106 -2.4798 18 6 1.7534 1.3464 -2.6310 19 6 1.2931 1.9981 -3.7597 20 6 0.6159 1.2934 -4.7376 21 6 0.3992 -0.0632 -4.5874 22 6 0.8653 -0.7174 -3.4607 23 17 0.6007 -2.4230 -3.2751 24 7 3.5049 -0.7207 -1.2497 25 6 4.2984 0.2756 -1.6954 26 6 5.5834 -0.1114 -1.5218 27 6 5.5748 -1.3878 -0.9499 28 7 4.3295 -1.7517 -0.7810 29 1 -0.3633 0.5138 -0.8899 30 1 -0.3633 -1.0277 -0.0005 31 1 -0.3633 0.5138 0.8901 32 1 2.2491 -1.6319 1.1524 33 1 2.5513 1.7417 5.6528 34 1 2.2818 1.8974 -1.8671 35 1 1.4624 3.0582 -3.8776 36 1 0.2561 1.8032 -5.6192 37 1 -0.1295 -0.6136 -5.3516 38 1 3.9673 1.2138 -2.1158 39 1 6.4606 0.4636 -1.7793 40 1 6.4458 -1.9704 -0.6884 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000585087589.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 14:51:41 Heat of formation + Delta-G solvation = 64.953673 kcal Electronic energy + Delta-G solvation = -26515.711998 eV Core-core repulsion = 22744.262415 eV Total energy + Delta-G solvation = -3771.449583 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 333.098 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -41.16934 -39.62132 -37.64273 -36.68693 -35.45049 -32.77126 -32.09625 -31.10343 -30.59809 -29.70620 -29.35654 -26.13839 -26.01357 -23.32196 -22.56726 -21.49512 -20.66894 -20.13312 -19.32424 -17.54308 -17.35021 -16.82779 -16.06014 -15.51200 -15.20079 -14.84216 -14.42451 -14.38008 -14.06610 -13.85516 -13.65658 -13.43496 -13.12636 -12.88614 -12.42533 -12.38844 -12.29815 -11.92532 -11.75385 -11.62370 -11.58506 -11.47995 -11.03429 -11.00030 -10.88277 -10.50905 -10.41904 -10.32999 -10.15886 -9.26228 -9.05163 -8.98505 -8.83422 -8.26049 -7.60737 -7.51705 -6.16408 -4.60184 0.77589 0.91808 1.87745 2.25397 2.74910 3.15117 3.21014 3.23436 3.28592 3.39741 4.02726 4.19960 4.45444 4.60561 4.66180 4.81318 4.94789 4.99138 5.05689 5.11273 5.15016 5.34054 5.34636 5.57741 5.67596 5.77964 5.86092 5.90315 6.00367 6.04355 6.07664 6.11097 6.15304 6.30552 6.45528 6.47389 6.71026 6.98387 7.30756 7.47082 7.95152 8.05940 8.10116 8.36766 9.06183 9.54692 10.62075 10.80641 Molecular weight = 333.10amu Principal moments of inertia in cm(-1) A = 0.014681 B = 0.003861 C = 0.003654 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1906.822914 B = 7251.102305 C = 7660.608869 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.156 4.156 2 C 0.150 3.850 3 H 0.081 0.919 4 N -0.755 5.755 5 C 0.560 3.440 6 O -0.582 6.582 7 C -0.541 4.541 8 H 0.067 0.933 9 C 0.089 3.911 10 N -0.769 5.769 11 Si 0.906 3.094 12 H -0.263 1.263 13 H -0.276 1.276 14 H -0.276 1.276 15 C 0.188 3.812 16 H 0.116 0.884 17 C -0.084 4.084 18 C -0.093 4.093 19 C -0.112 4.112 20 C -0.101 4.101 21 C -0.112 4.112 22 C -0.016 4.016 23 Cl -0.059 7.059 24 N -0.349 5.349 25 C 0.050 3.950 26 C -0.276 4.276 27 C 0.040 3.960 28 N -0.280 5.280 29 H 0.051 0.949 30 H 0.052 0.948 31 H 0.072 0.928 32 H 0.384 0.616 33 H 0.266 0.734 34 H 0.139 0.861 35 H 0.134 0.866 36 H 0.134 0.866 37 H 0.136 0.864 38 H 0.166 0.834 39 H 0.142 0.858 40 H 0.179 0.821 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.311 -1.585 -19.996 20.101 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.216 4.216 2 C 0.042 3.958 3 H 0.099 0.901 4 N -0.410 5.410 5 C 0.364 3.636 6 O -0.465 6.465 7 C -0.578 4.578 8 H 0.085 0.915 9 C -0.131 4.131 10 N -0.398 5.398 11 Si 0.730 3.270 12 H -0.187 1.187 13 H -0.202 1.202 14 H -0.202 1.202 15 C 0.086 3.914 16 H 0.134 0.866 17 C -0.086 4.086 18 C -0.111 4.111 19 C -0.130 4.130 20 C -0.119 4.119 21 C -0.130 4.130 22 C -0.044 4.044 23 Cl -0.030 7.030 24 N -0.130 5.130 25 C -0.096 4.096 26 C -0.306 4.306 27 C -0.146 4.146 28 N -0.101 5.101 29 H 0.070 0.930 30 H 0.071 0.929 31 H 0.091 0.909 32 H 0.216 0.784 33 H 0.077 0.923 34 H 0.157 0.843 35 H 0.152 0.848 36 H 0.152 0.848 37 H 0.154 0.846 38 H 0.183 0.817 39 H 0.160 0.840 40 H 0.196 0.804 Dipole moment (debyes) X Y Z Total from point charges -2.477 -1.631 -19.380 19.605 hybrid contribution 0.956 -0.280 0.489 1.110 sum -1.521 -1.911 -18.890 19.048 Atomic orbital electron populations 1.22165 0.95496 1.01733 1.02186 1.20811 0.93672 0.97227 0.84065 0.90140 1.46119 1.72998 1.13078 1.08776 1.18173 0.77638 0.86296 0.81495 1.90580 1.55055 1.16383 1.84510 1.20902 1.46420 0.97208 0.93228 0.91472 1.25682 0.93296 0.94443 0.99651 1.70033 1.35512 1.08175 1.26065 0.86344 0.78774 0.80432 0.81403 1.18737 1.20185 1.20193 1.20588 0.75526 1.02353 0.92978 0.86581 1.19556 0.99920 0.94256 0.94884 1.21245 0.98762 0.92890 0.98215 1.21276 0.97599 1.00570 0.93563 1.21181 0.98050 0.93369 0.99312 1.21045 1.00507 0.94976 0.96519 1.20816 1.01757 0.85534 0.96259 1.98385 1.95103 1.12352 1.97198 1.48523 1.05089 1.12689 1.46673 1.22511 0.91371 0.95029 1.00696 1.21371 0.96513 0.98804 1.13898 1.23777 0.95234 0.96219 0.99399 1.77342 1.01527 1.11096 1.20110 0.93029 0.92856 0.90879 0.78409 0.92284 0.84349 0.84814 0.84837 0.84649 0.81666 0.84041 0.80440 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -2.74 9.24 37.16 0.34 -2.40 16 2 C 0.15 2.87 2.11 -67.93 -0.14 2.72 16 3 H 0.08 1.71 6.48 -51.93 -0.34 1.38 16 4 N -0.75 -17.41 4.90 -55.22 -0.27 -17.68 16 5 C 0.56 16.07 7.71 -12.99 -0.10 15.97 16 6 O -0.58 -18.66 14.68 5.20 0.08 -18.59 16 7 C -0.54 -15.69 9.54 -35.63 -0.34 -16.03 16 8 H 0.07 1.84 7.85 -52.48 -0.41 1.43 16 9 C 0.09 2.52 5.50 -17.37 -0.10 2.43 16 10 N -0.77 -23.29 11.83 55.55 0.66 -22.63 16 11 Si 0.91 20.69 29.56 -169.99 -5.02 15.67 16 12 H -0.26 -5.86 7.11 56.52 0.40 -5.46 16 13 H -0.28 -6.19 7.11 56.52 0.40 -5.79 16 14 H -0.28 -6.16 7.11 56.52 0.40 -5.76 16 15 C 0.19 2.98 2.53 -69.08 -0.17 2.81 16 16 H 0.12 1.87 6.21 -51.93 -0.32 1.55 16 17 C -0.08 -1.09 3.46 -104.59 -0.36 -1.45 16 18 C -0.09 -1.06 7.22 -39.59 -0.29 -1.35 16 19 C -0.11 -0.99 10.05 -39.58 -0.40 -1.39 16 20 C -0.10 -0.81 10.04 -39.59 -0.40 -1.20 16 21 C -0.11 -1.04 9.83 -39.55 -0.39 -1.42 16 22 C -0.02 -0.19 6.31 -39.50 -0.25 -0.44 16 23 Cl -0.06 -0.71 27.02 -51.86 -1.40 -2.11 16 24 N -0.35 -5.88 3.35 -55.99 -0.19 -6.07 16 25 C 0.05 0.77 10.27 -17.23 -0.18 0.59 16 26 C -0.28 -4.09 10.80 -40.01 -0.43 -4.52 16 27 C 0.04 0.63 12.02 -17.37 -0.21 0.42 16 28 N -0.28 -5.07 12.58 30.63 0.39 -4.68 16 29 H 0.05 0.77 7.19 -51.93 -0.37 0.40 16 30 H 0.05 0.87 8.14 -51.93 -0.42 0.45 16 31 H 0.07 1.50 8.14 -51.93 -0.42 1.07 16 32 H 0.38 8.48 8.58 -40.82 -0.35 8.13 16 33 H 0.27 7.32 8.29 -40.82 -0.34 6.98 16 34 H 0.14 1.64 5.93 -52.49 -0.31 1.33 16 35 H 0.13 0.87 8.06 -52.49 -0.42 0.45 16 36 H 0.13 0.69 8.06 -52.48 -0.42 0.27 16 37 H 0.14 0.98 8.06 -52.48 -0.42 0.56 16 38 H 0.17 2.09 5.40 -52.48 -0.28 1.80 16 39 H 0.14 1.71 8.06 -52.49 -0.42 1.29 16 40 H 0.18 2.21 8.06 -52.48 -0.42 1.79 16 LS Contribution 354.39 15.07 5.34 5.34 Total: -1.00 -35.84 354.39 -8.32 -44.16 By element: Atomic # 1 Polarization: 16.35 SS G_CDS: -4.48 Total: 11.87 kcal Atomic # 6 Polarization: -1.86 SS G_CDS: -3.41 Total: -5.27 kcal Atomic # 7 Polarization: -51.64 SS G_CDS: 0.58 Total: -51.06 kcal Atomic # 8 Polarization: -18.66 SS G_CDS: 0.08 Total: -18.59 kcal Atomic # 14 Polarization: 20.69 SS G_CDS: -5.02 Total: 15.67 kcal Atomic # 17 Polarization: -0.71 SS G_CDS: -1.40 Total: -2.11 kcal Total LS contribution 5.34 Total: 5.34 kcal Total: -35.84 -8.32 -44.16 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000585087589.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 109.111 kcal (2) G-P(sol) polarization free energy of solvation -35.839 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 73.272 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.318 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -44.157 kcal (6) G-S(sol) free energy of system = (1) + (5) 64.954 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds