Wall clock time and date at job start Fri Apr 10 2020 14:58:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50693 * 1 3 3 N 1.31027 * 125.58108 * 2 1 4 4 N 1.39887 * 109.24168 * 180.02562 * 3 2 1 5 5 C 1.36982 * 107.97486 * 0.23166 * 4 3 2 6 6 N 1.33705 * 120.79526 * 180.32040 * 5 4 3 7 7 C 1.31595 * 121.18713 * 359.73926 * 6 5 4 8 8 C 1.50697 * 119.83934 * 180.02562 * 7 6 5 9 9 C 1.39436 * 120.32787 * 0.02562 * 7 6 5 10 10 C 1.37015 * 132.36805 * 180.02562 * 4 3 2 11 11 N 1.37785 * 120.58430 * 0.02562 * 10 4 3 12 12 C 1.46906 * 111.00315 * 304.02317 * 11 10 4 13 13 C 1.53237 * 109.34031 * 172.74518 * 12 11 10 14 14 N 1.47087 * 108.52252 * 53.83363 * 13 12 11 15 15 C 1.36931 * 120.88343 * 128.83414 * 14 13 12 16 16 H 1.08001 * 120.00128 * 206.56835 * 15 14 13 17 17 C 1.38817 * 119.99976 * 26.56720 * 15 14 13 18 18 N 1.31618 * 119.99672 * 17.01787 * 17 15 14 19 19 Si 1.86794 * 119.99871 * 197.01701 * 17 15 14 20 20 H 1.48497 * 109.47422 * 60.00147 * 19 17 15 21 21 H 1.48499 * 109.47275 * 180.02562 * 19 17 15 22 22 H 1.48507 * 109.47220 * 299.99905 * 19 17 15 23 23 C 1.47083 * 118.23492 * 308.81676 * 14 13 12 24 24 C 1.46901 * 111.00113 * 179.72297 * 11 10 4 25 25 C 1.40024 * 125.58750 * 180.56472 * 2 1 3 26 26 C 1.48114 * 126.39242 * 359.43740 * 25 2 1 27 27 C 1.39484 * 120.13552 * 115.47065 * 26 25 2 28 28 C 1.37977 * 119.86210 * 179.79174 * 27 26 25 29 29 C 1.38345 * 120.13536 * 0.49271 * 28 27 26 30 30 C 1.38351 * 120.27300 * 359.73754 * 29 28 27 31 31 C 1.37977 * 120.13892 * 0.02706 * 30 29 28 32 32 H 1.08992 * 109.47591 * 89.97559 * 1 2 3 33 33 H 1.09007 * 109.46946 * 209.97644 * 1 2 3 34 34 H 1.09002 * 109.47299 * 329.97043 * 1 2 3 35 35 H 1.09000 * 109.46734 * 269.98070 * 8 7 6 36 36 H 1.09001 * 109.46850 * 29.97542 * 8 7 6 37 37 H 1.08997 * 109.47458 * 149.97661 * 8 7 6 38 38 H 1.08007 * 120.40036 * 179.97438 * 9 7 6 39 39 H 1.08996 * 109.49115 * 292.70572 * 12 11 10 40 40 H 1.08998 * 109.48960 * 52.79008 * 12 11 10 41 41 H 1.08997 * 109.63104 * 294.12283 * 13 12 11 42 42 H 1.08995 * 109.63087 * 173.54069 * 13 12 11 43 43 H 0.97004 * 119.99471 * 180.02562 * 18 17 15 44 44 H 1.09011 * 109.62645 * 291.47221 * 23 14 13 45 45 H 1.08998 * 109.62857 * 170.89602 * 23 14 13 46 46 H 1.09001 * 109.49288 * 307.21779 * 24 11 10 47 47 H 1.09006 * 109.49126 * 67.29526 * 24 11 10 48 48 H 1.08001 * 120.06830 * 0.02562 * 27 26 25 49 49 H 1.08004 * 119.93217 * 180.25593 * 28 27 26 50 50 H 1.07999 * 119.86338 * 179.72141 * 29 28 27 51 51 H 1.08007 * 119.93037 * 180.02562 * 30 29 28 52 52 H 1.07993 * 120.07099 * 179.97438 * 31 30 29 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 7 2.2693 1.0656 0.0000 4 7 3.6117 0.6721 -0.0006 5 6 3.6508 -0.6972 -0.0062 6 7 4.8184 -1.3487 -0.0016 7 6 5.9620 -0.6976 0.0034 8 6 7.2603 -1.4627 0.0079 9 6 5.9784 0.6967 0.0044 10 6 4.7825 1.3838 -0.0004 11 7 4.7655 2.7615 0.0011 12 6 3.9911 3.2797 -1.1347 13 6 3.8436 4.7988 -0.9974 14 7 5.1829 5.3858 -0.8383 15 6 5.5922 6.4270 -1.6278 16 1 6.6439 6.5746 -1.8246 17 6 4.6555 7.2929 -2.1753 18 7 3.4336 7.3342 -1.6879 19 14 5.1293 8.3994 -3.6038 20 1 5.5620 7.5654 -4.7537 21 1 3.9592 9.2227 -4.0015 22 1 6.2435 9.2904 -3.1914 23 6 6.0706 4.8250 0.1917 24 6 6.1303 3.3049 0.0077 25 6 2.3218 -1.1387 -0.0112 26 6 1.8637 -2.5472 -0.0134 27 6 2.1317 -3.3690 -1.1081 28 6 1.7060 -4.6815 -1.1023 29 6 1.0058 -5.1798 -0.0181 30 6 0.7327 -4.3682 1.0685 31 6 1.1573 -3.0554 1.0768 32 1 -0.3634 0.0004 -1.0276 33 1 -0.3633 -0.8903 0.5135 34 1 -0.3634 0.8897 0.5143 35 1 7.5694 -1.6475 1.0367 36 1 7.1234 -2.4137 -0.5068 37 1 8.0271 -0.8802 -0.5028 38 1 6.9164 1.2322 0.0089 39 1 4.5097 3.0472 -2.0647 40 1 3.0039 2.8178 -1.1428 41 1 3.2362 5.0302 -0.1224 42 1 3.3707 5.2031 -1.8923 43 1 2.7790 7.9390 -2.0708 44 1 5.6771 5.0589 1.1810 45 1 7.0698 5.2466 0.0829 46 1 6.6945 2.8611 0.8279 47 1 6.6191 3.0720 -0.9384 48 1 2.6745 -2.9799 -1.9568 49 1 1.9165 -5.3200 -1.9475 50 1 0.6708 -6.2065 -0.0202 51 1 0.1860 -4.7631 1.9122 52 1 0.9432 -2.4228 1.9254 RHF calculation, no. of doubly occupied orbitals= 70 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000020589532.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 14:58:50 Heat of formation + Delta-G solvation = 182.533075 kcal Electronic energy + Delta-G solvation = -34559.680598 eV Core-core repulsion = 30334.130906 eV Total energy + Delta-G solvation = -4225.549692 eV No. of doubly occupied orbitals = 70 Molecular weight (most abundant/longest-lived isotopes) = 377.191 amu Computer time = 1.23 seconds Orbital eigenvalues (eV) -42.32283 -39.54677 -38.72719 -37.87131 -35.31529 -33.62744 -32.37408 -31.74028 -30.91684 -30.89156 -30.35597 -29.63872 -27.68659 -27.39553 -26.76930 -23.94332 -23.32606 -22.60943 -22.43954 -21.83985 -21.43693 -19.96853 -19.52325 -18.08759 -17.18109 -16.90604 -16.70416 -16.17835 -15.98893 -15.23201 -14.90625 -14.81221 -14.64171 -14.45651 -14.23746 -13.94721 -13.67888 -13.58702 -13.44446 -13.31287 -13.25100 -13.18880 -13.05415 -12.86594 -12.51369 -12.46114 -12.27135 -11.75477 -11.58121 -11.54019 -11.31147 -11.22842 -11.02192 -10.85714 -10.76656 -10.67020 -10.62448 -10.31898 -9.97691 -9.96259 -9.66634 -9.24598 -8.98699 -8.92812 -8.67965 -8.53021 -7.38145 -6.89432 -5.93129 -3.36474 0.65417 0.96096 1.36138 1.42327 1.96946 2.59168 3.29972 3.35947 3.36941 3.37893 3.59385 3.76347 3.87321 4.23221 4.36868 4.64508 4.83308 4.93656 4.94333 4.96526 5.07476 5.10826 5.14889 5.18956 5.22623 5.36727 5.37639 5.44797 5.48687 5.52642 5.53787 5.55220 5.59159 5.64822 5.66874 5.73688 5.81611 5.84505 5.89523 6.00453 6.04519 6.07772 6.23177 6.32776 6.37928 6.48396 6.49754 6.58923 6.65394 6.68970 6.89270 6.95441 7.01100 7.22116 7.44785 7.64307 7.65595 7.83903 8.25416 9.03045 9.65718 10.22468 11.16112 Molecular weight = 377.19amu Principal moments of inertia in cm(-1) A = 0.013609 B = 0.002334 C = 0.002117 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2056.938631 B =11993.916105 C =13223.472403 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 C 0.133 3.867 3 N -0.302 5.302 4 N -0.321 5.321 5 C 0.312 3.688 6 N -0.505 5.505 7 C 0.232 3.768 8 C -0.104 4.104 9 C -0.313 4.313 10 C 0.415 3.585 11 N -0.468 5.468 12 C 0.033 3.967 13 C 0.179 3.821 14 N -0.595 5.595 15 C -0.261 4.261 16 H 0.069 0.931 17 C 0.005 3.995 18 N -0.901 5.901 19 Si 0.906 3.094 20 H -0.283 1.283 21 H -0.289 1.289 22 H -0.281 1.281 23 C 0.146 3.854 24 C 0.039 3.961 25 C -0.232 4.232 26 C 0.028 3.972 27 C -0.100 4.100 28 C -0.120 4.120 29 C -0.130 4.130 30 C -0.121 4.121 31 C -0.112 4.112 32 H 0.083 0.917 33 H 0.081 0.919 34 H 0.079 0.921 35 H 0.087 0.913 36 H 0.082 0.918 37 H 0.083 0.917 38 H 0.166 0.834 39 H 0.044 0.956 40 H 0.092 0.908 41 H 0.033 0.967 42 H 0.099 0.901 43 H 0.257 0.743 44 H 0.031 0.969 45 H 0.070 0.930 46 H 0.081 0.919 47 H 0.058 0.942 48 H 0.116 0.884 49 H 0.118 0.882 50 H 0.117 0.883 51 H 0.119 0.881 52 H 0.119 0.881 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.062 -22.185 3.787 22.506 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.134 4.134 2 C -0.028 4.028 3 N -0.125 5.125 4 N -0.093 5.093 5 C 0.083 3.917 6 N -0.222 5.222 7 C 0.073 3.927 8 C -0.161 4.161 9 C -0.342 4.342 10 C 0.196 3.804 11 N -0.180 5.180 12 C -0.092 4.092 13 C 0.053 3.947 14 N -0.318 5.318 15 C -0.390 4.390 16 H 0.087 0.913 17 C -0.195 4.195 18 N -0.544 5.544 19 Si 0.735 3.265 20 H -0.210 1.210 21 H -0.215 1.215 22 H -0.207 1.207 23 C 0.019 3.981 24 C -0.089 4.089 25 C -0.246 4.246 26 C 0.027 3.973 27 C -0.119 4.119 28 C -0.138 4.138 29 C -0.148 4.148 30 C -0.139 4.139 31 C -0.130 4.130 32 H 0.101 0.899 33 H 0.100 0.900 34 H 0.098 0.902 35 H 0.105 0.895 36 H 0.101 0.899 37 H 0.101 0.899 38 H 0.183 0.817 39 H 0.062 0.938 40 H 0.110 0.890 41 H 0.052 0.948 42 H 0.117 0.883 43 H 0.067 0.933 44 H 0.049 0.951 45 H 0.088 0.912 46 H 0.099 0.901 47 H 0.076 0.924 48 H 0.134 0.866 49 H 0.136 0.864 50 H 0.135 0.865 51 H 0.137 0.863 52 H 0.137 0.863 Dipole moment (debyes) X Y Z Total from point charges -0.606 -21.327 4.133 21.733 hybrid contribution 0.606 0.525 -1.104 1.365 sum 0.000 -20.802 3.028 21.022 Atomic orbital electron populations 1.20291 0.85732 1.03754 1.03624 1.22388 0.97034 0.89173 0.94205 1.77716 0.82651 1.20946 1.31203 1.46803 1.05514 1.06937 1.50084 1.20419 0.93989 0.79175 0.98110 1.67953 0.95407 1.36463 1.22341 1.21550 0.93932 0.90523 0.86664 1.20768 0.91108 1.00454 1.03762 1.21731 0.96631 0.95017 1.20808 1.19501 0.82543 0.89294 0.89025 1.57913 1.17898 1.00154 1.42032 1.23357 0.97177 1.01766 0.86943 1.20929 0.87194 0.84207 1.02365 1.44173 1.12932 1.37235 1.37430 1.19129 0.92733 1.03973 1.23147 0.91317 1.25074 0.96638 0.97405 1.00344 1.70004 1.04288 1.39318 1.40823 0.86325 0.77446 0.80186 0.82539 1.20965 1.21494 1.20734 1.21034 0.95877 0.88127 0.93023 1.23123 0.84699 0.99757 1.01305 1.17854 0.87574 0.93159 1.25976 1.17761 0.96174 0.89982 0.93394 1.21230 0.99298 0.93525 0.97798 1.21029 0.98876 0.95406 0.98489 1.21103 0.99848 0.99556 0.94263 1.21012 1.00558 0.93915 0.98406 1.21234 0.98803 0.95353 0.97612 0.89852 0.90006 0.90164 0.89451 0.89891 0.89857 0.81683 0.93777 0.88997 0.94840 0.88322 0.93273 0.95140 0.91190 0.90082 0.92361 0.86578 0.86381 0.86535 0.86332 0.86345 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.84 10.25 36.00 0.37 -0.47 16 2 C 0.13 2.05 7.20 -82.27 -0.59 1.46 16 3 N -0.30 -5.46 10.62 33.73 0.36 -5.10 16 4 N -0.32 -5.71 3.73 -11.14 -0.04 -5.76 16 5 C 0.31 5.28 7.89 -155.48 -1.23 4.05 16 6 N -0.50 -7.84 10.38 -8.39 -0.09 -7.92 16 7 C 0.23 3.01 6.82 -82.25 -0.56 2.45 16 8 C -0.10 -0.86 10.19 36.00 0.37 -0.50 16 9 C -0.31 -4.24 8.52 -39.25 -0.33 -4.57 16 10 C 0.41 6.98 6.49 -152.53 -0.99 5.99 16 11 N -0.47 -8.44 4.67 -172.31 -0.81 -9.24 16 12 C 0.03 0.65 5.47 -3.70 -0.02 0.63 16 13 C 0.18 4.23 5.42 -3.60 -0.02 4.21 16 14 N -0.59 -14.24 3.04 -172.01 -0.52 -14.77 16 15 C -0.26 -6.81 9.63 -15.06 -0.15 -6.96 16 16 H 0.07 1.74 7.88 -52.49 -0.41 1.32 16 17 C 0.00 0.12 4.94 -17.43 -0.09 0.04 16 18 N -0.90 -25.45 11.15 55.49 0.62 -24.83 16 19 Si 0.91 21.00 29.59 -169.99 -5.03 15.97 16 20 H -0.28 -6.51 7.11 56.52 0.40 -6.11 16 21 H -0.29 -6.79 7.11 56.52 0.40 -6.39 16 22 H -0.28 -6.43 7.11 56.52 0.40 -6.03 16 23 C 0.15 2.83 6.69 -3.60 -0.02 2.81 16 24 C 0.04 0.62 4.29 -3.70 -0.02 0.60 16 25 C -0.23 -3.60 5.58 -104.50 -0.58 -4.19 16 26 C 0.03 0.38 5.43 -104.91 -0.57 -0.19 16 27 C -0.10 -1.25 9.79 -39.21 -0.38 -1.63 16 28 C -0.12 -1.24 10.03 -39.64 -0.40 -1.64 16 29 C -0.13 -1.23 10.04 -39.50 -0.40 -1.63 16 30 C -0.12 -1.19 10.03 -39.64 -0.40 -1.59 16 31 C -0.11 -1.30 8.97 -39.21 -0.35 -1.65 16 32 H 0.08 0.84 8.14 -51.93 -0.42 0.42 16 33 H 0.08 0.77 7.18 -51.92 -0.37 0.40 16 34 H 0.08 0.86 8.14 -51.93 -0.42 0.44 16 35 H 0.09 0.61 8.14 -51.93 -0.42 0.19 16 36 H 0.08 0.67 8.14 -51.93 -0.42 0.25 16 37 H 0.08 0.53 8.09 -51.93 -0.42 0.11 16 38 H 0.17 1.79 5.84 -52.48 -0.31 1.49 16 39 H 0.04 0.89 8.14 -51.93 -0.42 0.46 16 40 H 0.09 1.87 5.92 -51.93 -0.31 1.56 16 41 H 0.03 0.86 8.14 -51.93 -0.42 0.44 16 42 H 0.10 2.58 6.12 -51.93 -0.32 2.26 16 43 H 0.26 7.06 8.31 -40.82 -0.34 6.72 16 44 H 0.03 0.62 8.14 -51.92 -0.42 0.20 16 45 H 0.07 1.25 7.95 -51.93 -0.41 0.84 16 46 H 0.08 1.04 6.88 -51.93 -0.36 0.68 16 47 H 0.06 0.90 7.82 -51.93 -0.41 0.50 16 48 H 0.12 1.47 8.06 -52.49 -0.42 1.05 16 49 H 0.12 0.97 8.06 -52.48 -0.42 0.55 16 50 H 0.12 0.83 8.06 -52.49 -0.42 0.41 16 51 H 0.12 0.90 8.06 -52.48 -0.42 0.47 16 52 H 0.12 1.29 8.06 -52.49 -0.42 0.87 16 LS Contribution 417.44 15.07 6.29 6.29 Total: -1.00 -31.98 417.44 -13.10 -45.08 By element: Atomic # 1 Polarization: 10.61 SS G_CDS: -7.52 Total: 3.08 kcal Atomic # 6 Polarization: 3.56 SS G_CDS: -6.36 Total: -2.80 kcal Atomic # 7 Polarization: -67.14 SS G_CDS: -0.48 Total: -67.62 kcal Atomic # 14 Polarization: 21.00 SS G_CDS: -5.03 Total: 15.97 kcal Total LS contribution 6.29 Total: 6.29 kcal Total: -31.98 -13.10 -45.08 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000020589532.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 227.609 kcal (2) G-P(sol) polarization free energy of solvation -31.975 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 195.634 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.101 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -45.076 kcal (6) G-S(sol) free energy of system = (1) + (5) 182.533 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.23 seconds