Wall clock time and date at job start Fri Apr 10 2020 14:55:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.53006 * 109.47209 * 2 1 4 4 C 1.50700 * 109.47188 * 120.00172 * 2 1 3 5 5 N 1.28018 * 119.99855 * 240.00239 * 4 2 1 6 6 N 1.40097 * 119.99748 * 180.02562 * 5 4 2 7 7 C 1.39019 * 119.99905 * 180.02562 * 6 5 4 8 8 C 1.39105 * 119.70224 * 179.97438 * 7 6 5 9 9 C 1.38451 * 119.07628 * 179.71995 * 8 7 6 10 10 Cl 1.73609 * 120.75814 * 180.22848 * 9 8 7 11 11 C 1.39023 * 118.48228 * 0.25433 * 9 8 7 12 12 C 1.38000 * 119.31926 * 0.02562 * 11 9 8 13 13 N 1.31965 * 120.87169 * 359.97438 * 12 11 9 14 14 C 1.53004 * 109.47510 * 240.00242 * 2 1 3 15 15 C 1.50695 * 109.47116 * 59.99480 * 14 2 1 16 16 H 1.08008 * 120.00098 * 0.02562 * 15 14 2 17 17 C 1.37874 * 120.00378 * 180.02562 * 15 14 2 18 18 N 1.31518 * 119.99830 * 0.02562 * 17 15 14 19 19 Si 1.86803 * 120.00396 * 180.02562 * 17 15 14 20 20 H 1.48501 * 109.46955 * 0.02562 * 19 17 15 21 21 H 1.48505 * 109.46926 * 120.00261 * 19 17 15 22 22 H 1.48496 * 109.46975 * 239.99950 * 19 17 15 23 23 H 1.08991 * 109.47366 * 299.99926 * 1 2 3 24 24 H 1.09004 * 109.46898 * 60.00161 * 1 2 3 25 25 H 1.08999 * 109.46974 * 179.97438 * 1 2 3 26 26 H 1.08999 * 109.46746 * 180.02562 * 3 2 1 27 27 H 1.09004 * 109.47060 * 300.00297 * 3 2 1 28 28 H 1.09004 * 109.46746 * 59.99979 * 3 2 1 29 29 H 1.07998 * 120.00027 * 59.99873 * 4 2 1 30 30 H 0.96997 * 120.00616 * 359.97438 * 6 5 4 31 31 H 1.08002 * 120.46262 * 0.02562 * 8 7 6 32 32 H 1.08004 * 120.34508 * 179.97438 * 11 9 8 33 33 H 1.08000 * 119.56532 * 179.97438 * 12 11 9 34 34 H 1.08991 * 109.47542 * 180.02562 * 14 2 1 35 35 H 1.09009 * 109.46723 * 300.00319 * 14 2 1 36 36 H 0.96998 * 120.00170 * 179.97438 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0323 -0.7104 1.2304 5 7 2.7683 -0.0883 2.0731 6 7 3.2357 -0.7489 3.2167 7 6 4.0345 -0.0731 4.1321 8 6 4.4948 -0.7349 5.2658 9 6 5.2943 -0.0512 6.1659 10 17 5.8976 -0.8363 7.5920 11 6 5.6024 1.2785 5.9020 12 6 5.1060 1.8734 4.7600 13 7 4.3460 1.1968 3.9196 14 6 2.0401 -0.7212 -1.2493 15 6 1.5377 -0.0109 -2.4797 16 1 0.9170 0.8675 -2.3806 17 6 1.8704 -0.4821 -3.7320 18 7 2.6258 -1.5519 -3.8527 19 14 1.2482 0.3989 -5.2572 20 1 0.4245 1.5665 -4.8530 21 1 2.4036 0.8647 -6.0656 22 1 0.4226 -0.5340 -6.0654 23 1 -0.3633 0.5138 0.8899 24 1 -0.3633 0.5138 -0.8900 25 1 -0.3633 -1.0277 -0.0005 26 1 3.1300 1.4425 -0.0005 27 1 1.6766 1.9564 -0.8900 28 1 1.6767 1.9563 0.8900 29 1 1.7714 -1.7444 1.4013 30 1 3.0015 -1.6776 3.3702 31 1 4.2362 -1.7692 5.4389 32 1 6.2232 1.8405 6.5840 33 1 5.3425 2.9063 4.5513 34 1 3.1300 -0.7216 -1.2490 35 1 1.6767 -1.7489 -1.2493 36 1 2.8596 -1.8837 -4.7337 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000777907517.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 14:55:44 Heat of formation + Delta-G solvation = 61.407990 kcal Electronic energy + Delta-G solvation = -18733.252116 eV Core-core repulsion = 15665.009394 eV Total energy + Delta-G solvation = -3068.242722 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 281.099 amu Computer time = 0.36 seconds Orbital eigenvalues (eV) -40.30659 -37.86462 -36.97291 -35.74082 -32.85103 -32.18769 -31.84129 -28.82800 -27.02568 -26.35706 -24.29855 -23.74168 -22.86744 -21.35169 -18.57919 -17.76812 -17.00357 -16.30110 -16.18502 -15.67800 -14.89770 -14.78214 -14.52974 -13.86259 -13.60864 -13.37619 -12.86940 -12.77447 -12.50808 -12.06413 -11.99487 -11.37855 -11.30713 -10.99893 -10.89860 -10.79192 -10.58443 -10.25681 -10.14079 -9.92747 -9.66443 -9.64479 -9.44606 -9.18751 -8.95446 -8.36719 -7.73812 -6.01075 -4.01919 0.94201 1.05247 1.66378 2.63342 2.69451 3.31288 3.39533 3.42738 3.74753 4.25303 4.46030 4.72866 4.78961 4.84482 5.22248 5.35387 5.36675 5.41888 5.61593 5.81309 5.92047 5.96903 6.11373 6.34991 6.40658 6.56435 6.69559 6.81665 7.00163 7.09007 7.11979 7.26508 7.61119 7.72298 7.89786 7.97791 8.38179 8.55920 9.02704 9.61379 11.10590 Molecular weight = 281.10amu Principal moments of inertia in cm(-1) A = 0.037554 B = 0.002862 C = 0.002845 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 745.406574 B = 9781.227854 C = 9841.071023 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.123 4.123 2 C -0.011 4.011 3 C -0.116 4.116 4 C 0.097 3.903 5 N -0.235 5.235 6 N -0.577 5.577 7 C 0.440 3.560 8 C -0.234 4.234 9 C 0.050 3.950 10 Cl -0.060 7.060 11 C -0.230 4.230 12 C 0.163 3.837 13 N -0.501 5.501 14 C 0.039 3.961 15 C -0.508 4.508 16 H 0.063 0.937 17 C 0.056 3.944 18 N -0.896 5.896 19 Si 0.890 3.110 20 H -0.272 1.272 21 H -0.285 1.285 22 H -0.285 1.285 23 H 0.034 0.966 24 H 0.075 0.925 25 H 0.048 0.952 26 H 0.051 0.949 27 H 0.062 0.938 28 H 0.037 0.963 29 H 0.098 0.902 30 H 0.390 0.610 31 H 0.140 0.860 32 H 0.141 0.859 33 H 0.166 0.834 34 H 0.019 0.981 35 H 0.018 0.982 36 H 0.259 0.741 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.231 2.021 19.972 20.332 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.181 4.181 2 C -0.014 4.014 3 C -0.174 4.174 4 C -0.118 4.118 5 N -0.037 5.037 6 N -0.298 5.298 7 C 0.205 3.795 8 C -0.261 4.261 9 C 0.015 3.985 10 Cl -0.031 7.031 11 C -0.254 4.254 12 C 0.003 3.997 13 N -0.217 5.217 14 C 0.001 3.999 15 C -0.547 4.547 16 H 0.081 0.919 17 C -0.145 4.145 18 N -0.536 5.536 19 Si 0.718 3.282 20 H -0.196 1.196 21 H -0.211 1.211 22 H -0.212 1.212 23 H 0.053 0.947 24 H 0.094 0.906 25 H 0.067 0.933 26 H 0.070 0.930 27 H 0.081 0.919 28 H 0.057 0.943 29 H 0.115 0.885 30 H 0.230 0.770 31 H 0.158 0.842 32 H 0.159 0.841 33 H 0.183 0.817 34 H 0.037 0.963 35 H 0.037 0.963 36 H 0.069 0.931 Dipole moment (debyes) X Y Z Total from point charges 3.475 3.119 19.432 19.985 hybrid contribution -0.213 -1.587 0.038 1.602 sum 3.262 1.532 19.470 19.801 Atomic orbital electron populations 1.21718 0.93953 1.01294 1.01166 1.19770 0.95141 0.95976 0.90483 1.21585 1.00967 0.94532 1.00271 1.26628 0.92933 0.97579 0.94689 1.74573 1.11344 1.23517 0.94240 1.45630 1.51979 1.11967 1.20248 1.17773 0.87655 0.88488 0.85598 1.21091 1.06433 1.02293 0.96286 1.20824 0.95741 0.93130 0.88808 1.98385 1.86433 1.80563 1.37687 1.21814 1.07571 0.94144 1.01843 1.22621 0.89686 0.99492 0.87924 1.67406 1.16195 1.06489 1.31599 1.19139 0.96497 0.95123 0.89146 1.21212 1.31119 1.12088 0.90260 0.91906 1.25005 0.95276 0.95077 0.99121 1.69973 1.37117 1.23130 1.23362 0.86569 0.78624 0.79724 0.83303 1.19641 1.21132 1.21152 0.94651 0.90633 0.93254 0.93017 0.91902 0.94345 0.88500 0.77049 0.84216 0.84123 0.81693 0.96305 0.96345 0.93108 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -2.16 8.20 37.16 0.30 -1.85 16 2 C -0.01 -0.21 0.75 -155.66 -0.12 -0.33 16 3 C -0.12 -2.28 7.45 37.16 0.28 -2.00 16 4 C 0.10 1.68 9.56 -13.87 -0.13 1.55 16 5 N -0.24 -4.16 9.74 32.67 0.32 -3.84 16 6 N -0.58 -8.49 6.41 31.14 0.20 -8.29 16 7 C 0.44 6.30 7.59 -154.95 -1.18 5.13 16 8 C -0.23 -2.69 9.76 -39.18 -0.38 -3.08 16 9 C 0.05 0.53 6.37 -39.21 -0.25 0.28 16 10 Cl -0.06 -0.55 29.02 -51.86 -1.50 -2.06 16 11 C -0.23 -2.29 9.93 -39.38 -0.39 -2.68 16 12 C 0.16 1.85 11.17 -17.58 -0.20 1.66 16 13 N -0.50 -7.63 9.91 -12.43 -0.12 -7.75 16 14 C 0.04 0.95 4.02 -27.88 -0.11 0.83 16 15 C -0.51 -13.36 7.65 -34.44 -0.26 -13.62 16 16 H 0.06 1.59 5.68 -52.48 -0.30 1.29 16 17 C 0.06 1.54 5.46 -17.82 -0.10 1.45 16 18 N -0.90 -26.13 13.29 55.43 0.74 -25.40 16 19 Si 0.89 21.03 29.54 -169.99 -5.02 16.01 16 20 H -0.27 -6.25 7.11 56.52 0.40 -5.85 16 21 H -0.29 -6.77 7.11 56.52 0.40 -6.37 16 22 H -0.29 -6.71 7.11 56.52 0.40 -6.31 16 23 H 0.03 0.55 8.14 -51.93 -0.42 0.12 16 24 H 0.07 1.41 6.62 -51.93 -0.34 1.06 16 25 H 0.05 0.82 8.14 -51.93 -0.42 0.39 16 26 H 0.05 1.07 8.06 -51.93 -0.42 0.66 16 27 H 0.06 1.27 6.62 -51.93 -0.34 0.92 16 28 H 0.04 0.70 8.06 -51.93 -0.42 0.28 16 29 H 0.10 1.46 8.00 -52.49 -0.42 1.04 16 30 H 0.39 4.53 8.63 -182.60 -1.58 2.96 16 31 H 0.14 1.31 8.06 -52.49 -0.42 0.88 16 32 H 0.14 1.04 8.06 -52.48 -0.42 0.61 16 33 H 0.17 1.38 8.06 -52.49 -0.42 0.96 16 34 H 0.02 0.50 8.14 -51.93 -0.42 0.08 16 35 H 0.02 0.46 8.14 -51.92 -0.42 0.04 16 36 H 0.26 7.18 8.31 -40.82 -0.34 6.84 16 LS Contribution 323.86 15.07 4.88 4.88 Total: -1.00 -30.54 323.86 -8.96 -39.50 By element: Atomic # 1 Polarization: 5.52 SS G_CDS: -5.91 Total: -0.39 kcal Atomic # 6 Polarization: -10.13 SS G_CDS: -2.54 Total: -12.67 kcal Atomic # 7 Polarization: -46.41 SS G_CDS: 1.13 Total: -45.28 kcal Atomic # 14 Polarization: 21.03 SS G_CDS: -5.02 Total: 16.01 kcal Atomic # 17 Polarization: -0.55 SS G_CDS: -1.50 Total: -2.06 kcal Total LS contribution 4.88 Total: 4.88 kcal Total: -30.54 -8.96 -39.50 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000777907517.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 100.912 kcal (2) G-P(sol) polarization free energy of solvation -30.540 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 70.371 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.963 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.504 kcal (6) G-S(sol) free energy of system = (1) + (5) 61.408 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.36 seconds