Wall clock time and date at job start Fri Apr 10 2020 14:57:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53003 * 1 3 3 C 1.53003 * 109.46973 * 2 1 4 4 N 1.46498 * 109.46872 * 180.02562 * 3 2 1 5 5 C 1.36935 * 120.00259 * 263.33402 * 4 3 2 6 6 H 1.07992 * 120.00440 * 144.13730 * 5 4 3 7 7 C 1.38817 * 119.99527 * 324.12541 * 5 4 3 8 8 N 1.31621 * 119.99513 * 159.49754 * 7 5 4 9 9 Si 1.86795 * 120.00376 * 339.50362 * 7 5 4 10 10 H 1.48505 * 109.46993 * 95.54723 * 9 7 5 11 11 H 1.48496 * 109.47331 * 215.55211 * 9 7 5 12 12 H 1.48501 * 109.47201 * 335.55304 * 9 7 5 13 13 C 1.46509 * 119.99909 * 83.32961 * 4 3 2 14 14 C 1.50700 * 109.46789 * 90.17834 * 13 4 3 15 15 C 1.38373 * 120.00958 * 270.64082 * 14 13 4 16 16 Cl 1.73594 * 120.01157 * 359.96101 * 15 14 13 17 17 C 1.38328 * 119.97303 * 179.97438 * 15 14 13 18 18 C 1.38237 * 119.98758 * 0.02562 * 17 15 14 19 19 C 1.38223 * 120.01196 * 359.97438 * 18 17 15 20 20 C 1.38194 * 120.00214 * 90.89853 * 14 13 4 21 21 C 1.50702 * 119.99691 * 0.02562 * 20 14 13 22 22 C 1.53006 * 109.47080 * 84.04844 * 21 20 14 23 23 H 1.09000 * 109.47540 * 59.99911 * 1 2 3 24 24 H 1.09000 * 109.47278 * 180.02562 * 1 2 3 25 25 H 1.09005 * 109.46822 * 299.99756 * 1 2 3 26 26 H 1.08997 * 109.46560 * 240.00158 * 2 1 3 27 27 H 1.09000 * 109.46824 * 120.00301 * 2 1 3 28 28 H 1.09000 * 109.46744 * 60.00224 * 3 2 1 29 29 H 1.09000 * 109.47060 * 300.00383 * 3 2 1 30 30 H 0.96999 * 120.00111 * 179.97438 * 8 7 5 31 31 H 1.08999 * 109.46769 * 330.18572 * 13 4 3 32 32 H 1.08997 * 109.47322 * 210.18023 * 13 4 3 33 33 H 1.08003 * 120.00909 * 180.02562 * 17 15 14 34 34 H 1.08000 * 119.99434 * 179.97438 * 18 17 15 35 35 H 1.08002 * 119.98371 * 180.02562 * 19 18 17 36 36 H 1.08997 * 109.47043 * 204.04834 * 21 20 14 37 37 H 1.09001 * 109.47022 * 324.04869 * 21 20 14 38 38 H 1.09002 * 109.46930 * 65.63248 * 22 21 20 39 39 H 1.08999 * 109.47146 * 185.63857 * 22 21 20 40 40 H 1.09004 * 109.46862 * 305.63600 * 22 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 7 3.5050 1.4425 -0.0006 5 6 4.1902 1.5800 1.1770 6 1 5.1167 1.0461 1.3282 7 6 3.6940 2.4059 2.1763 8 7 4.0935 2.2467 3.4203 9 14 2.4594 3.7431 1.7556 10 1 1.0831 3.2392 1.9954 11 1 2.7071 4.9321 2.6100 12 1 2.6063 4.1208 0.3270 13 6 4.2370 1.2953 -1.2612 14 6 4.4917 2.6563 -1.8559 15 6 3.5645 3.2213 -2.7137 16 17 2.1080 2.3621 -3.1059 17 6 3.7988 4.4709 -3.2588 18 6 4.9592 5.1542 -2.9468 19 6 5.8851 4.5893 -2.0899 20 6 5.6539 3.3381 -1.5489 21 6 6.6668 2.7202 -0.6198 22 6 7.5772 1.7789 -1.4110 23 1 -0.3634 0.5138 -0.8899 24 1 -0.3634 -1.0277 0.0005 25 1 -0.3633 0.5138 0.8901 26 1 1.8932 -0.5138 -0.8900 27 1 1.8933 -0.5139 0.8900 28 1 1.6766 1.9563 0.8900 29 1 1.6766 1.9564 -0.8899 30 1 3.7471 2.8240 4.1185 31 1 3.6461 0.6996 -1.9569 32 1 5.1880 0.7972 -1.0730 33 1 3.0753 4.9126 -3.9281 34 1 5.1425 6.1297 -3.3726 35 1 6.7913 5.1238 -1.8461 36 1 7.2670 3.5065 -0.1620 37 1 6.1506 2.1577 0.1582 38 1 8.1675 2.3569 -2.1221 39 1 8.2440 1.2566 -0.7250 40 1 6.9686 1.0526 -1.9497 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000475569161.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 14:57:37 Heat of formation + Delta-G solvation = 24.907367 kcal Electronic energy + Delta-G solvation = -21080.671959 eV Core-core repulsion = 18114.386795 eV Total energy + Delta-G solvation = -2966.285164 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 281.124 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -39.37903 -36.36816 -36.13188 -33.76453 -32.56026 -31.92566 -30.14601 -29.00271 -26.22220 -25.58942 -23.37997 -22.30604 -21.26486 -20.72814 -19.66089 -16.87570 -16.27374 -15.58555 -15.27368 -14.93847 -14.52936 -13.89537 -13.64163 -13.34627 -13.22811 -13.04091 -12.74259 -12.48251 -12.25349 -12.15386 -11.67136 -11.60728 -11.36086 -11.22256 -10.98234 -10.92795 -10.77187 -10.63669 -10.37420 -10.26310 -10.12261 -9.92207 -9.55298 -9.34841 -8.59945 -8.20383 -8.14738 -6.86496 -6.02315 -3.41513 1.61343 1.73075 2.56909 3.32106 3.47834 3.57163 4.02806 4.51781 5.07393 5.14297 5.18078 5.29966 5.42867 5.55187 5.62868 5.69887 5.74622 5.81799 5.87965 5.95526 6.02806 6.07256 6.14946 6.26191 6.36347 6.39774 6.42145 6.48968 6.57811 6.61350 6.61813 6.70557 6.83155 6.92897 6.95620 7.12708 7.16827 7.32938 8.01739 8.30987 8.93658 9.67892 10.09068 11.12121 Molecular weight = 281.12amu Principal moments of inertia in cm(-1) A = 0.013163 B = 0.009776 C = 0.007565 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2126.716382 B = 2863.388270 C = 3700.513902 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C -0.137 4.137 3 C 0.126 3.874 4 N -0.591 5.591 5 C -0.262 4.262 6 H 0.085 0.915 7 C 0.040 3.960 8 N -0.898 5.898 9 Si 0.873 3.127 10 H -0.287 1.287 11 H -0.304 1.304 12 H -0.264 1.264 13 C 0.173 3.827 14 C -0.072 4.072 15 C -0.031 4.031 16 Cl -0.079 7.079 17 C -0.125 4.125 18 C -0.125 4.125 19 C -0.121 4.121 20 C -0.045 4.045 21 C -0.106 4.106 22 C -0.141 4.141 23 H 0.045 0.955 24 H 0.046 0.954 25 H 0.049 0.951 26 H 0.051 0.949 27 H 0.065 0.935 28 H 0.053 0.947 29 H 0.050 0.950 30 H 0.263 0.737 31 H 0.056 0.944 32 H 0.069 0.931 33 H 0.121 0.879 34 H 0.121 0.879 35 H 0.119 0.881 36 H 0.063 0.937 37 H 0.118 0.882 38 H 0.045 0.955 39 H 0.055 0.945 40 H 0.054 0.946 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.657 1.243 -12.421 12.500 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.177 4.177 3 C 0.001 3.999 4 N -0.311 5.311 5 C -0.390 4.390 6 H 0.102 0.898 7 C -0.161 4.161 8 N -0.539 5.539 9 Si 0.704 3.296 10 H -0.215 1.215 11 H -0.233 1.233 12 H -0.188 1.188 13 C 0.047 3.953 14 C -0.076 4.076 15 C -0.059 4.059 16 Cl -0.050 7.050 17 C -0.144 4.144 18 C -0.144 4.144 19 C -0.139 4.139 20 C -0.047 4.047 21 C -0.143 4.143 22 C -0.198 4.198 23 H 0.064 0.936 24 H 0.065 0.935 25 H 0.068 0.932 26 H 0.069 0.931 27 H 0.084 0.916 28 H 0.070 0.930 29 H 0.068 0.932 30 H 0.073 0.927 31 H 0.074 0.926 32 H 0.087 0.913 33 H 0.139 0.861 34 H 0.139 0.861 35 H 0.137 0.863 36 H 0.081 0.919 37 H 0.136 0.864 38 H 0.064 0.936 39 H 0.074 0.926 40 H 0.073 0.927 Dipole moment (debyes) X Y Z Total from point charges 0.527 1.186 -12.244 12.313 hybrid contribution -0.996 1.121 -0.105 1.503 sum -0.468 2.307 -12.349 12.571 Atomic orbital electron populations 1.21733 0.97392 1.00505 1.01021 1.21994 0.93796 1.00219 1.01689 1.21440 0.84047 0.94420 0.99980 1.44213 1.00382 1.84574 1.01910 1.18751 1.08360 1.22139 0.89756 0.89794 1.25405 0.97942 0.97368 0.95411 1.69833 1.45605 1.38969 0.99480 0.86980 0.80920 0.82713 0.78973 1.21538 1.23287 1.18850 1.20152 0.97384 0.89729 0.88061 1.20833 0.91953 1.01273 0.93558 1.20742 0.89390 0.94351 1.01373 1.98309 1.36669 1.77303 1.92754 1.20851 0.98383 0.93631 1.01520 1.20865 0.94217 0.99663 0.99607 1.21104 0.99430 0.95529 0.97867 1.19722 0.94752 0.93752 0.96433 1.20916 0.95638 0.99626 0.98079 1.21730 0.99062 0.99217 0.99801 0.93611 0.93515 0.93205 0.93058 0.91617 0.92959 0.93211 0.92704 0.92597 0.91305 0.86056 0.86116 0.86273 0.91869 0.86393 0.93629 0.92603 0.92660 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -2.43 9.91 37.16 0.37 -2.06 16 2 C -0.14 -2.62 6.25 -26.73 -0.17 -2.79 16 3 C 0.13 2.76 4.23 -4.04 -0.02 2.74 16 4 N -0.59 -13.45 2.11 -174.61 -0.37 -13.82 16 5 C -0.26 -6.84 8.19 -15.06 -0.12 -6.96 16 6 H 0.08 2.32 7.19 -52.49 -0.38 1.94 16 7 C 0.04 1.11 5.31 -17.43 -0.09 1.02 16 8 N -0.90 -26.62 13.97 55.49 0.78 -25.84 16 9 Si 0.87 22.64 24.82 -169.99 -4.22 18.42 16 10 H -0.29 -7.33 6.69 56.52 0.38 -6.96 16 11 H -0.30 -8.07 7.11 56.52 0.40 -7.67 16 12 H -0.26 -6.90 7.11 56.52 0.40 -6.50 16 13 C 0.17 3.38 4.97 -5.19 -0.03 3.36 16 14 C -0.07 -1.37 5.47 -104.59 -0.57 -1.94 16 15 C -0.03 -0.56 6.31 -39.50 -0.25 -0.81 16 16 Cl -0.08 -1.32 24.57 -51.86 -1.27 -2.60 16 17 C -0.13 -2.00 9.83 -39.55 -0.39 -2.39 16 18 C -0.12 -1.86 10.05 -39.59 -0.40 -2.26 16 19 C -0.12 -1.93 9.68 -39.58 -0.38 -2.32 16 20 C -0.05 -0.82 5.13 -104.63 -0.54 -1.36 16 21 C -0.11 -1.83 5.37 -27.88 -0.15 -1.98 16 22 C -0.14 -2.00 9.62 37.16 0.36 -1.64 16 23 H 0.04 0.70 8.14 -51.93 -0.42 0.27 16 24 H 0.05 0.66 8.14 -51.93 -0.42 0.24 16 25 H 0.05 0.84 8.14 -51.93 -0.42 0.41 16 26 H 0.05 0.92 8.08 -51.93 -0.42 0.50 16 27 H 0.07 1.36 8.14 -51.93 -0.42 0.94 16 28 H 0.05 1.28 3.26 -51.93 -0.17 1.11 16 29 H 0.05 1.04 5.06 -51.93 -0.26 0.78 16 30 H 0.26 7.50 8.31 -40.82 -0.34 7.16 16 31 H 0.06 1.03 6.80 -51.93 -0.35 0.67 16 32 H 0.07 1.31 5.29 -51.93 -0.27 1.03 16 33 H 0.12 1.66 8.06 -52.48 -0.42 1.23 16 34 H 0.12 1.43 8.06 -52.49 -0.42 1.00 16 35 H 0.12 1.62 8.06 -52.49 -0.42 1.20 16 36 H 0.06 1.03 8.04 -51.93 -0.42 0.62 16 37 H 0.12 2.43 4.06 -51.93 -0.21 2.22 16 38 H 0.04 0.58 8.14 -51.93 -0.42 0.15 16 39 H 0.05 0.74 8.14 -51.93 -0.42 0.32 16 40 H 0.05 0.78 6.97 -51.93 -0.36 0.42 16 LS Contribution 322.79 15.07 4.86 4.86 Total: -1.00 -28.84 322.79 -8.41 -37.25 By element: Atomic # 1 Polarization: 6.92 SS G_CDS: -5.81 Total: 1.11 kcal Atomic # 6 Polarization: -17.01 SS G_CDS: -2.38 Total: -19.38 kcal Atomic # 7 Polarization: -40.07 SS G_CDS: 0.41 Total: -39.66 kcal Atomic # 14 Polarization: 22.64 SS G_CDS: -4.22 Total: 18.42 kcal Atomic # 17 Polarization: -1.32 SS G_CDS: -1.27 Total: -2.60 kcal Total LS contribution 4.86 Total: 4.86 kcal Total: -28.84 -8.41 -37.25 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000475569161.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 62.156 kcal (2) G-P(sol) polarization free energy of solvation -28.838 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 33.317 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.410 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.248 kcal (6) G-S(sol) free energy of system = (1) + (5) 24.907 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds