Wall clock time and date at job start Fri Apr 10 2020 14:57:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13601 * 1 3 3 C 1.47202 * 179.97438 * 2 1 4 4 N 1.46500 * 109.47340 * 283.42375 * 3 2 1 5 5 C 1.36882 * 119.99862 * 274.19353 * 4 3 2 6 6 H 1.07998 * 119.99648 * 138.88587 * 5 4 3 7 7 C 1.39037 * 120.00032 * 318.89351 * 5 4 3 8 8 N 1.31368 * 120.00339 * 161.60923 * 7 5 4 9 9 Si 1.86800 * 119.99907 * 341.60856 * 7 5 4 10 10 H 1.48496 * 109.47020 * 92.20791 * 9 7 5 11 11 H 1.48502 * 109.46946 * 212.20770 * 9 7 5 12 12 H 1.48501 * 109.47184 * 332.20609 * 9 7 5 13 13 C 1.34772 * 119.99994 * 94.18871 * 4 3 2 14 14 O 1.21600 * 119.99791 * 184.61001 * 13 4 3 15 15 C 1.47655 * 120.00458 * 4.33654 * 13 4 3 16 16 C 1.39706 * 120.14916 * 304.38147 * 15 13 4 17 17 C 1.37881 * 119.90786 * 179.72055 * 16 15 13 18 18 C 1.38405 * 120.21383 * 0.56655 * 17 16 15 19 19 C 1.38488 * 120.30642 * 359.68473 * 18 17 16 20 20 F 1.35102 * 119.95804 * 180.02562 * 19 18 17 21 21 C 1.38360 * 120.08419 * 0.03550 * 19 18 17 22 22 Cl 1.73604 * 120.10701 * 180.02562 * 21 19 18 23 23 H 1.08993 * 109.46961 * 163.41904 * 3 2 1 24 24 H 1.08998 * 109.46963 * 43.42211 * 3 2 1 25 25 H 0.96998 * 120.00160 * 179.97438 * 8 7 5 26 26 H 1.08003 * 120.04398 * 359.97438 * 16 15 13 27 27 H 1.08003 * 119.89181 * 180.27171 * 17 16 15 28 28 H 1.08007 * 119.85039 * 179.70222 * 18 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 7 3.0966 -0.3198 1.3435 5 6 3.2425 0.6738 2.2736 6 1 2.9498 0.5009 3.2987 7 6 3.7675 1.9054 1.8987 8 7 3.5825 2.9583 2.6623 9 14 4.7359 2.0631 0.3091 10 1 3.8189 2.4507 -0.7927 11 1 5.7843 3.1025 0.4693 12 1 5.3743 0.7616 -0.0128 13 6 3.4021 -1.5928 1.6635 14 8 3.7272 -1.8723 2.8015 15 6 3.3364 -2.6491 0.6340 16 6 2.1552 -2.8587 -0.0819 17 6 2.1011 -3.8427 -1.0462 18 6 3.2099 -4.6315 -1.2993 19 6 4.3837 -4.4349 -0.5914 20 9 5.4619 -5.2086 -0.8445 21 6 4.4537 -3.4473 0.3751 22 17 5.9251 -3.1999 1.2625 23 1 2.9709 0.9857 -0.2932 24 1 2.9717 -0.7456 -0.7064 25 1 3.9491 3.8174 2.4009 26 1 1.2868 -2.2481 0.1169 27 1 1.1891 -4.0016 -1.6026 28 1 3.1595 -5.4038 -2.0527 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000079860433.mol2 28 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 14:57:05 Heat of formation + Delta-G solvation = -3.142137 kcal Electronic energy + Delta-G solvation = -19540.443790 eV Core-core repulsion = 16112.389903 eV Total energy + Delta-G solvation = -3428.053887 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 282.031 amu Computer time = 0.41 seconds Orbital eigenvalues (eV) -49.02264 -40.06209 -38.04655 -36.52303 -36.25190 -34.83383 -32.45439 -31.12071 -30.53344 -27.93448 -25.78682 -23.38430 -22.78206 -20.00166 -18.76182 -17.71322 -16.98842 -16.63885 -16.44873 -16.03394 -15.70492 -15.66836 -14.54227 -14.19655 -14.02735 -13.73158 -13.36376 -13.00211 -12.81000 -12.62848 -12.50998 -12.20391 -11.90953 -11.79207 -11.62581 -11.44293 -11.06002 -10.74849 -10.56949 -10.13931 -9.44461 -9.04691 -8.87034 -8.76936 -8.19057 -6.61269 -4.27472 0.74497 0.87877 2.14076 2.80233 2.86012 2.97633 3.06840 3.14034 3.16855 3.45493 3.86544 3.93504 4.20228 4.32706 4.56845 4.73950 4.82130 4.97978 5.04120 5.28081 5.37639 5.54155 5.70883 5.76483 5.96125 6.09995 6.51587 7.23176 7.82106 7.95853 8.16533 8.62849 8.97976 9.33426 10.49170 Molecular weight = 282.03amu Principal moments of inertia in cm(-1) A = 0.018578 B = 0.007796 C = 0.006490 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1506.804214 B = 3590.633887 C = 4313.139235 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.433 5.433 2 C 0.208 3.792 3 C 0.172 3.828 4 N -0.449 5.449 5 C -0.322 4.322 6 H 0.114 0.886 7 C 0.068 3.932 8 N -0.848 5.848 9 Si 0.858 3.142 10 H -0.266 1.266 11 H -0.276 1.276 12 H -0.252 1.252 13 C 0.512 3.488 14 O -0.517 6.517 15 C -0.073 4.073 16 C -0.106 4.106 17 C -0.087 4.087 18 C -0.138 4.138 19 C 0.105 3.895 20 F -0.127 7.127 21 C -0.042 4.042 22 Cl -0.026 7.026 23 H 0.112 0.888 24 H 0.112 0.888 25 H 0.279 0.721 26 H 0.137 0.863 27 H 0.142 0.858 28 H 0.145 0.855 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.348 -10.848 -11.554 15.906 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.112 5.112 2 C -0.111 4.111 3 C 0.045 3.955 4 N -0.172 5.172 5 C -0.449 4.449 6 H 0.131 0.869 7 C -0.141 4.141 8 N -0.482 5.482 9 Si 0.684 3.316 10 H -0.193 1.193 11 H -0.202 1.202 12 H -0.175 1.175 13 C 0.299 3.701 14 O -0.395 6.395 15 C -0.078 4.078 16 C -0.125 4.125 17 C -0.106 4.106 18 C -0.157 4.157 19 C 0.085 3.915 20 F -0.105 7.105 21 C -0.070 4.070 22 Cl 0.003 6.997 23 H 0.129 0.871 24 H 0.129 0.871 25 H 0.090 0.910 26 H 0.155 0.845 27 H 0.160 0.840 28 H 0.163 0.837 Dipole moment (debyes) X Y Z Total from point charges 0.070 -10.753 -10.783 15.229 hybrid contribution 1.231 0.262 -0.799 1.491 sum 1.301 -10.491 -11.583 15.682 Atomic orbital electron populations 1.81092 1.12848 1.09217 1.08054 1.29798 0.95615 0.92637 0.93051 1.19651 0.81520 1.04783 0.89526 1.43461 1.56552 1.06844 1.10334 1.19061 1.42819 0.89997 0.93007 0.86883 1.25414 0.95518 0.95073 0.98087 1.69667 1.40329 0.99756 1.38421 0.87224 0.81326 0.80063 0.83016 1.19328 1.20230 1.17533 1.17940 0.81697 0.82456 0.87969 1.90745 1.48302 1.80578 1.19856 1.20201 0.92590 0.97231 0.97730 1.21531 0.97031 0.98702 0.95282 1.21015 0.98276 0.94153 0.97120 1.21175 0.91420 1.01978 1.01129 1.17259 0.85085 0.91797 0.97360 1.91536 1.53088 1.72840 1.93084 1.20953 0.90813 0.98169 0.97113 1.98420 1.31650 1.95895 1.73743 0.87126 0.87065 0.90984 0.84492 0.83998 0.83688 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.43 -8.28 18.54 42.15 0.78 -7.50 15 2 C 0.21 3.77 13.25 -20.76 -0.28 3.50 15 3 C 0.17 3.08 4.35 -6.83 -0.03 3.05 15 4 N -0.45 -9.93 2.09 -119.08 -0.25 -10.18 15 5 C -0.32 -8.36 9.30 -15.00 -0.14 -8.50 15 6 H 0.11 3.34 7.94 -52.49 -0.42 2.92 15 7 C 0.07 1.72 5.37 -17.45 -0.09 1.62 15 8 N -0.85 -22.83 13.95 55.50 0.77 -22.06 15 9 Si 0.86 17.97 25.05 -169.99 -4.26 13.71 15 10 H -0.27 -5.01 6.60 56.52 0.37 -4.64 15 11 H -0.28 -5.88 7.11 56.52 0.40 -5.48 15 12 H -0.25 -5.10 7.11 56.52 0.40 -4.70 15 13 C 0.51 11.15 6.50 -12.42 -0.08 11.07 15 14 O -0.52 -13.10 16.14 5.28 0.09 -13.02 15 15 C -0.07 -1.26 4.65 -104.95 -0.49 -1.75 15 16 C -0.11 -1.49 7.74 -39.16 -0.30 -1.79 15 17 C -0.09 -0.92 10.03 -39.65 -0.40 -1.32 15 18 C -0.14 -1.45 10.02 -39.43 -0.39 -1.84 15 19 C 0.11 1.42 7.27 -39.44 -0.29 1.14 15 20 F -0.13 -1.72 16.83 2.25 0.04 -1.68 15 21 C -0.04 -0.68 6.35 -38.98 -0.25 -0.93 15 22 Cl -0.03 -0.47 27.09 -51.86 -1.41 -1.88 15 23 H 0.11 2.02 3.16 -51.93 -0.16 1.86 15 24 H 0.11 1.59 5.86 -51.93 -0.30 1.29 15 25 H 0.28 6.93 8.31 -40.82 -0.34 6.59 15 26 H 0.14 1.98 5.49 -52.48 -0.29 1.70 15 27 H 0.14 1.04 8.06 -52.48 -0.42 0.62 15 28 H 0.15 1.06 8.06 -52.48 -0.42 0.64 15 LS Contribution 272.22 15.07 4.10 4.10 Total: -1.00 -29.39 272.22 -4.05 -33.44 By element: Atomic # 1 Polarization: 1.97 SS G_CDS: -1.18 Total: 0.79 kcal Atomic # 6 Polarization: 6.99 SS G_CDS: -2.74 Total: 4.25 kcal Atomic # 7 Polarization: -41.04 SS G_CDS: 1.31 Total: -39.73 kcal Atomic # 8 Polarization: -13.10 SS G_CDS: 0.09 Total: -13.02 kcal Atomic # 9 Polarization: -1.72 SS G_CDS: 0.04 Total: -1.68 kcal Atomic # 14 Polarization: 17.97 SS G_CDS: -4.26 Total: 13.71 kcal Atomic # 17 Polarization: -0.47 SS G_CDS: -1.41 Total: -1.88 kcal Total LS contribution 4.10 Total: 4.10 kcal Total: -29.39 -4.05 -33.44 kcal The number of atoms in the molecule is 28 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000079860433.mol2 28 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 30.301 kcal (2) G-P(sol) polarization free energy of solvation -29.393 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 0.908 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.050 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.444 kcal (6) G-S(sol) free energy of system = (1) + (5) -3.142 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.41 seconds