Wall clock time and date at job start Fri Apr 10 2020 15:00:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17398 * 1 3 3 C 1.47202 * 179.97438 * 2 1 4 4 N 1.46505 * 109.46997 * 128.58614 * 3 2 1 5 5 C 1.36811 * 120.00036 * 265.54697 * 4 3 2 6 6 H 1.08001 * 119.99953 * 196.02643 * 5 4 3 7 7 C 1.39085 * 120.00120 * 16.02820 * 5 4 3 8 8 N 1.31336 * 120.00037 * 13.53955 * 7 5 4 9 9 Si 1.86800 * 120.00173 * 193.54105 * 7 5 4 10 10 H 1.48500 * 109.47321 * 0.02562 * 9 7 5 11 11 H 1.48500 * 109.47186 * 120.00207 * 9 7 5 12 12 H 1.48508 * 109.47231 * 239.99938 * 9 7 5 13 13 C 1.34781 * 119.99909 * 85.54812 * 4 3 2 14 14 O 1.21578 * 120.00164 * 4.04038 * 13 4 3 15 15 C 1.47854 * 119.99971 * 184.03108 * 13 4 3 16 16 C 1.40025 * 120.94306 * 306.94874 * 15 13 4 17 17 C 1.37955 * 119.05681 * 179.79695 * 16 15 13 18 18 N 1.31910 * 121.00510 * 0.48608 * 17 16 15 19 19 C 1.31831 * 122.09138 * 359.74116 * 18 17 16 20 20 Cl 1.73593 * 119.59061 * 179.97438 * 19 18 17 21 21 C 1.38662 * 120.82237 * 0.02562 * 19 18 17 22 22 F 1.35103 * 120.54906 * 179.97438 * 21 19 18 23 23 H 4.40639 * 5.51523 * 180.02562 * 4 1 2 24 24 H 1.08992 * 109.47652 * 8.58707 * 3 2 1 25 25 H 1.09003 * 109.47218 * 248.58497 * 3 2 1 26 26 H 0.96998 * 120.00217 * 179.97438 * 8 7 5 27 27 H 1.07997 * 120.47391 * 0.02562 * 16 15 13 28 28 H 1.08000 * 119.49630 * 180.23230 * 17 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 7 3.1339 0.8624 -1.0797 5 6 3.4489 0.3223 -2.2966 6 1 4.0422 0.8868 -3.0007 7 6 3.0051 -0.9538 -2.6270 8 7 2.0757 -1.5338 -1.9027 9 14 3.7308 -1.8426 -4.1010 10 1 4.7535 -0.9798 -4.7451 11 1 4.3634 -3.1092 -3.6531 12 1 2.6527 -2.1456 -5.0764 13 6 3.2725 2.1872 -0.8741 14 8 3.0632 2.6566 0.2277 15 6 3.6793 3.0696 -1.9885 16 6 4.8283 2.7963 -2.7408 17 6 5.1693 3.6435 -3.7748 18 7 4.4366 4.7042 -4.0540 19 6 3.3497 5.0042 -3.3709 20 17 2.4340 6.4170 -3.7939 21 6 2.9294 4.2059 -2.3179 22 9 1.8150 4.5188 -1.6212 23 1 -1.0501 0.0000 0.0003 24 1 3.0099 -1.0152 -0.1534 25 1 3.0092 0.3761 0.9567 26 1 1.7659 -2.4236 -2.1333 27 1 5.4368 1.9326 -2.5171 28 1 6.0520 3.4374 -4.3620 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000491012413.mol2 28 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 15:00:05 Heat of formation + Delta-G solvation = 30.165807 kcal Electronic energy + Delta-G solvation = -19531.077908 eV Core-core repulsion = 16104.468362 eV Total energy + Delta-G solvation = -3426.609546 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 282.031 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -48.62240 -40.11210 -38.53186 -36.55589 -35.38370 -32.69122 -32.04740 -31.26927 -30.55746 -26.90530 -25.45852 -23.75510 -23.29770 -20.02490 -18.57950 -17.57451 -17.26516 -17.13386 -16.21925 -15.81971 -15.48175 -14.59925 -14.51416 -14.31802 -14.09926 -13.60472 -13.49411 -12.97869 -12.55601 -12.25407 -11.89132 -11.74467 -11.65529 -11.26585 -11.25827 -10.84252 -10.61301 -9.86763 -9.65240 -9.52752 -9.39105 -8.87427 -8.73746 -8.65528 -8.20090 -6.63908 -4.23752 0.93040 1.00234 1.80054 2.91068 3.03720 3.07401 3.32392 3.52222 3.85346 3.96215 4.12718 4.16166 4.43207 4.67615 4.77961 4.86779 5.19579 5.45377 5.56337 5.76501 5.98465 6.12223 6.47929 6.58457 6.78270 7.05060 7.07742 7.32680 7.68424 8.00592 8.71099 8.85468 9.05668 9.47388 10.32201 Molecular weight = 282.03amu Principal moments of inertia in cm(-1) A = 0.017404 B = 0.007048 C = 0.005754 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1608.481980 B = 3971.865742 C = 4864.767097 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.267 4.267 2 C -0.104 4.104 3 C 0.239 3.761 4 N -0.411 5.411 5 C -0.354 4.354 6 H 0.112 0.888 7 C 0.041 3.959 8 N -0.845 5.845 9 Si 0.926 3.074 10 H -0.264 1.264 11 H -0.275 1.275 12 H -0.279 1.279 13 C 0.481 3.519 14 O -0.584 6.584 15 C -0.051 4.051 16 C -0.109 4.109 17 C 0.096 3.904 18 N -0.456 5.456 19 C 0.135 3.865 20 Cl -0.024 7.024 21 C 0.100 3.900 22 F -0.108 7.108 23 H 0.199 0.801 24 H 0.121 0.879 25 H 0.070 0.930 26 H 0.275 0.725 27 H 0.163 0.837 28 H 0.173 0.827 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.290 4.130 -3.623 6.971 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.286 4.286 2 C -0.105 4.105 3 C 0.118 3.882 4 N -0.127 5.127 5 C -0.481 4.481 6 H 0.130 0.870 7 C -0.167 4.167 8 N -0.480 5.480 9 Si 0.751 3.249 10 H -0.188 1.188 11 H -0.201 1.201 12 H -0.204 1.204 13 C 0.269 3.731 14 O -0.470 6.470 15 C -0.064 4.064 16 C -0.130 4.130 17 C -0.061 4.061 18 N -0.167 5.167 19 C -0.031 4.031 20 Cl 0.005 6.995 21 C 0.076 3.924 22 F -0.086 7.086 23 H 0.216 0.784 24 H 0.139 0.861 25 H 0.088 0.912 26 H 0.086 0.914 27 H 0.181 0.819 28 H 0.190 0.810 Dipole moment (debyes) X Y Z Total from point charges 4.215 4.785 -3.751 7.398 hybrid contribution -0.670 -0.971 -0.277 1.212 sum 3.545 3.813 -4.028 6.583 Atomic orbital electron populations 1.24254 0.95392 1.04637 1.04330 1.23028 0.94248 0.96616 0.96600 1.18317 0.84378 0.96683 0.88864 1.43675 1.53181 1.03836 1.11982 1.20113 1.33589 1.00441 0.93996 0.87023 1.25432 0.94699 0.97578 0.99005 1.70042 1.23724 1.15652 1.38624 0.85869 0.79122 0.79528 0.80343 1.18838 1.20094 1.20426 1.17551 0.85814 0.82331 0.87384 1.90710 1.57560 1.74601 1.24175 1.20590 0.94802 0.93521 0.97459 1.22515 0.95884 1.00337 0.94272 1.22599 0.98469 0.89035 0.95957 1.66856 1.03909 1.18729 1.27231 1.21475 0.94758 0.92405 0.94425 1.98393 1.70663 1.37372 1.93120 1.18200 0.86403 0.95167 0.92647 1.91577 1.48099 1.91938 1.76961 0.78357 0.86142 0.91179 0.91374 0.81923 0.80972 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.27 -5.95 19.25 29.55 0.57 -5.38 15 2 C -0.10 -2.49 11.61 -37.12 -0.43 -2.92 15 3 C 0.24 5.54 5.12 -6.83 -0.03 5.51 15 4 N -0.41 -9.77 2.59 -119.01 -0.31 -10.08 15 5 C -0.35 -8.09 8.84 -15.02 -0.13 -8.22 15 6 H 0.11 2.33 4.37 -52.49 -0.23 2.10 15 7 C 0.04 0.92 5.09 -17.45 -0.09 0.84 15 8 N -0.84 -20.19 8.93 55.50 0.50 -19.70 15 9 Si 0.93 17.56 29.57 -169.99 -5.03 12.54 15 10 H -0.26 -4.77 7.11 56.52 0.40 -4.37 15 11 H -0.28 -5.20 7.11 56.52 0.40 -4.80 15 12 H -0.28 -5.49 7.11 56.52 0.40 -5.09 15 13 C 0.48 11.46 6.93 -12.32 -0.09 11.38 15 14 O -0.58 -15.42 16.53 5.30 0.09 -15.34 15 15 C -0.05 -1.05 5.13 -104.61 -0.54 -1.59 15 16 C -0.11 -1.79 7.64 -39.02 -0.30 -2.09 15 17 C 0.10 1.36 11.16 -17.62 -0.20 1.17 15 18 N -0.46 -7.47 10.31 -10.37 -0.11 -7.57 15 19 C 0.14 2.39 7.28 -17.40 -0.13 2.27 15 20 Cl -0.02 -0.37 28.78 -51.86 -1.49 -1.86 15 21 C 0.10 2.00 7.29 -38.74 -0.28 1.72 15 22 F -0.11 -2.31 16.34 2.25 0.04 -2.27 15 23 H 0.20 3.60 7.80 -54.08 -0.42 3.18 15 24 H 0.12 2.76 6.15 -51.93 -0.32 2.44 15 25 H 0.07 1.56 7.50 -51.93 -0.39 1.17 15 26 H 0.28 6.26 8.31 -40.82 -0.34 5.92 15 27 H 0.16 2.39 7.04 -52.49 -0.37 2.02 15 28 H 0.17 1.71 8.06 -52.49 -0.42 1.29 15 LS Contribution 278.95 15.07 4.20 4.20 Total: -1.00 -28.48 278.95 -5.04 -33.52 By element: Atomic # 1 Polarization: 5.16 SS G_CDS: -1.29 Total: 3.88 kcal Atomic # 6 Polarization: 4.33 SS G_CDS: -1.64 Total: 2.68 kcal Atomic # 7 Polarization: -37.43 SS G_CDS: 0.08 Total: -37.35 kcal Atomic # 8 Polarization: -15.42 SS G_CDS: 0.09 Total: -15.34 kcal Atomic # 9 Polarization: -2.31 SS G_CDS: 0.04 Total: -2.27 kcal Atomic # 14 Polarization: 17.56 SS G_CDS: -5.03 Total: 12.54 kcal Atomic # 17 Polarization: -0.37 SS G_CDS: -1.49 Total: -1.86 kcal Total LS contribution 4.20 Total: 4.20 kcal Total: -28.48 -5.04 -33.52 kcal The number of atoms in the molecule is 28 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000491012413.mol2 28 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 63.691 kcal (2) G-P(sol) polarization free energy of solvation -28.482 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 35.208 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.042 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.525 kcal (6) G-S(sol) free energy of system = (1) + (5) 30.166 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds