Wall clock time and date at job start Fri Apr 10 2020 14:59:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17396 * 1 3 3 C 1.47200 * 179.97438 * 2 1 4 4 N 1.46503 * 109.47347 * 294.25277 * 3 2 1 5 5 C 1.36808 * 119.99995 * 97.38461 * 4 3 2 6 6 H 1.07992 * 120.00151 * 154.39396 * 5 4 3 7 7 C 1.39091 * 119.99860 * 334.40041 * 5 4 3 8 8 N 1.31337 * 120.00264 * 348.77305 * 7 5 4 9 9 Si 1.86803 * 120.00026 * 168.76842 * 7 5 4 10 10 H 1.48499 * 109.46716 * 60.00196 * 9 7 5 11 11 H 1.48499 * 109.47039 * 179.97438 * 9 7 5 12 12 H 1.48497 * 109.47458 * 300.00384 * 9 7 5 13 13 C 1.34775 * 120.00479 * 277.39067 * 4 3 2 14 14 O 1.21585 * 120.00299 * 184.95371 * 13 4 3 15 15 C 1.47843 * 119.99440 * 4.95247 * 13 4 3 16 16 N 1.32905 * 119.75608 * 6.37252 * 15 13 4 17 17 C 1.31533 * 121.63995 * 179.97438 * 16 15 13 18 18 Cl 1.73598 * 119.52438 * 180.02562 * 17 16 15 19 19 C 1.38827 * 120.94768 * 359.97438 * 17 16 15 20 20 C 1.38438 * 119.40446 * 359.72886 * 19 17 16 21 21 C 1.38949 * 118.49018 * 0.53823 * 20 19 17 22 22 F 1.35096 * 120.48730 * 179.73095 * 21 20 19 23 23 H 4.40639 * 5.51392 * 179.97438 * 4 1 2 24 24 H 1.09006 * 109.47378 * 174.25646 * 3 2 1 25 25 H 1.08997 * 109.47201 * 54.25501 * 3 2 1 26 26 H 0.96997 * 120.00142 * 179.97438 * 8 7 5 27 27 H 1.08000 * 120.29838 * 179.97438 * 19 17 16 28 28 H 1.08004 * 120.75779 * 180.29745 * 20 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 7 3.1346 -0.5665 1.2593 5 6 3.5068 -1.8816 1.3184 6 1 4.2239 -2.2072 2.0573 7 6 2.9617 -2.7994 0.4267 8 7 1.9365 -2.4596 -0.3207 9 14 3.6877 -4.5152 0.2919 10 1 3.5961 -5.1962 1.6083 11 1 2.9319 -5.2943 -0.7216 12 1 5.1119 -4.4194 -0.1178 13 6 3.2174 0.2073 2.3597 14 8 3.7066 -0.2373 3.3802 15 6 2.7134 1.5967 2.3259 16 7 2.0661 2.0376 1.2521 17 6 1.6017 3.2663 1.1825 18 17 0.7636 3.7844 -0.2468 19 6 1.7712 4.1543 2.2360 20 6 2.4341 3.7364 3.3773 21 6 2.9198 2.4353 3.4228 22 9 3.5775 1.9870 4.5143 23 1 -1.0499 0.0001 0.0002 24 1 3.0089 1.0234 -0.1028 25 1 3.0096 -0.5995 -0.8341 26 1 1.5566 -3.0995 -0.9428 27 1 1.3859 5.1609 2.1675 28 1 2.5740 4.4076 4.2118 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000798805544.mol2 28 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 14:59:57 Heat of formation + Delta-G solvation = 42.665614 kcal Electronic energy + Delta-G solvation = -19725.342354 eV Core-core repulsion = 16299.274841 eV Total energy + Delta-G solvation = -3426.067514 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 282.031 amu Computer time = 0.36 seconds Orbital eigenvalues (eV) -48.52181 -40.13956 -38.15804 -36.42670 -35.23902 -32.85136 -31.78454 -31.14287 -30.41002 -26.47655 -25.51662 -23.85415 -23.09754 -20.19486 -17.82943 -17.54002 -17.32430 -16.80804 -16.44589 -15.64742 -15.42297 -14.75259 -14.18963 -14.11223 -13.88403 -13.56154 -13.32918 -12.93954 -12.48706 -12.33131 -12.05937 -11.58211 -11.29742 -11.13839 -11.07829 -10.67129 -10.49775 -9.92937 -9.52796 -9.34561 -9.02166 -8.71861 -8.57060 -8.45775 -7.90921 -6.48356 -4.03300 0.70718 1.07611 1.91461 3.06348 3.16798 3.19577 3.29780 3.80799 4.11648 4.15225 4.19445 4.43926 4.55427 4.62007 4.83037 4.98029 5.19594 5.40206 5.56147 5.75569 5.77504 5.95295 6.51826 6.71038 6.85586 7.25069 7.35317 7.69570 7.91744 8.27673 8.94487 9.09759 9.15091 9.75203 10.47131 Molecular weight = 282.03amu Principal moments of inertia in cm(-1) A = 0.019805 B = 0.007244 C = 0.005508 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1413.466362 B = 3864.164576 C = 5082.730273 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.284 4.284 2 C -0.067 4.067 3 C 0.237 3.763 4 N -0.396 5.396 5 C -0.304 4.304 6 H 0.108 0.892 7 C 0.034 3.966 8 N -0.841 5.841 9 Si 0.934 3.066 10 H -0.270 1.270 11 H -0.282 1.282 12 H -0.270 1.270 13 C 0.471 3.529 14 O -0.572 6.572 15 C 0.098 3.902 16 N -0.420 5.420 17 C 0.160 3.840 18 Cl -0.030 7.030 19 C -0.136 4.136 20 C -0.108 4.108 21 C 0.091 3.909 22 F -0.105 7.105 23 H 0.191 0.809 24 H 0.082 0.918 25 H 0.097 0.903 26 H 0.276 0.724 27 H 0.149 0.851 28 H 0.155 0.845 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.682 12.089 -0.533 12.217 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.303 4.303 2 C -0.069 4.069 3 C 0.114 3.886 4 N -0.110 5.110 5 C -0.432 4.432 6 H 0.126 0.874 7 C -0.174 4.174 8 N -0.476 5.476 9 Si 0.759 3.241 10 H -0.195 1.195 11 H -0.207 1.207 12 H -0.195 1.195 13 C 0.259 3.741 14 O -0.456 6.456 15 C -0.042 4.042 16 N -0.133 5.133 17 C -0.007 4.007 18 Cl -0.001 7.001 19 C -0.158 4.158 20 C -0.135 4.135 21 C 0.067 3.933 22 F -0.083 7.083 23 H 0.208 0.792 24 H 0.099 0.901 25 H 0.115 0.885 26 H 0.086 0.914 27 H 0.167 0.833 28 H 0.173 0.827 Dipole moment (debyes) X Y Z Total from point charges -1.689 11.165 -0.996 11.336 hybrid contribution -0.150 -0.269 0.476 0.567 sum -1.839 10.896 -0.519 11.062 Atomic orbital electron populations 1.23959 0.95083 1.08253 1.02968 1.22478 0.93565 0.93298 0.97520 1.18529 0.85220 0.97053 0.87767 1.43665 1.51087 1.09559 1.06730 1.19830 1.22949 0.82028 1.18376 0.87407 1.25585 0.94825 1.00517 0.96453 1.69994 1.18809 1.36423 1.22370 0.85870 0.79043 0.80643 0.78498 1.19471 1.20683 1.19462 1.17338 0.88121 0.83984 0.84617 1.90696 1.50613 1.73265 1.31049 1.21969 0.97216 0.96442 0.88535 1.67887 1.07779 1.13511 1.24165 1.21771 0.97690 0.91393 0.89841 1.98394 1.75277 1.88567 1.37895 1.21682 1.01040 1.01037 0.92078 1.21504 0.98139 0.94451 0.99386 1.18623 0.96280 0.92811 0.85543 1.91596 1.77285 1.89281 1.50151 0.79174 0.90080 0.88471 0.91357 0.83300 0.82744 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.28 -6.21 19.25 29.55 0.57 -5.64 15 2 C -0.07 -1.55 9.19 -37.12 -0.34 -1.89 15 3 C 0.24 5.51 4.75 -6.83 -0.03 5.47 15 4 N -0.40 -10.27 2.59 -119.02 -0.31 -10.58 15 5 C -0.30 -8.20 9.24 -15.02 -0.14 -8.34 15 6 H 0.11 3.00 7.42 -52.49 -0.39 2.61 15 7 C 0.03 0.86 5.06 -17.45 -0.09 0.77 15 8 N -0.84 -21.54 9.27 55.50 0.51 -21.03 15 9 Si 0.93 19.80 29.57 -169.99 -5.03 14.78 15 10 H -0.27 -5.81 7.11 56.52 0.40 -5.41 15 11 H -0.28 -5.85 7.11 56.52 0.40 -5.45 15 12 H -0.27 -5.59 7.11 56.52 0.40 -5.19 15 13 C 0.47 12.09 7.52 -12.33 -0.09 12.00 15 14 O -0.57 -16.21 15.05 5.29 0.08 -16.13 15 15 C 0.10 2.08 6.55 -82.96 -0.54 1.54 15 16 N -0.42 -8.11 4.64 -6.91 -0.03 -8.14 15 17 C 0.16 2.50 7.27 -17.46 -0.13 2.37 15 18 Cl -0.03 -0.41 29.10 -51.86 -1.51 -1.92 15 19 C -0.14 -1.70 9.88 -39.29 -0.39 -2.09 15 20 C -0.11 -1.43 10.16 -39.24 -0.40 -1.83 15 21 C 0.09 1.66 7.31 -38.81 -0.28 1.38 15 22 F -0.11 -2.09 15.57 2.25 0.04 -2.06 15 23 H 0.19 3.55 7.80 -54.10 -0.42 3.13 15 24 H 0.08 1.74 5.90 -51.93 -0.31 1.43 15 25 H 0.10 2.33 6.62 -51.93 -0.34 1.98 15 26 H 0.28 6.72 8.31 -40.82 -0.34 6.38 15 27 H 0.15 1.29 8.06 -52.49 -0.42 0.87 15 28 H 0.15 1.45 8.06 -52.48 -0.42 1.03 15 LS Contribution 275.45 15.07 4.15 4.15 Total: -1.00 -30.42 275.45 -5.40 -35.82 By element: Atomic # 1 Polarization: 2.82 SS G_CDS: -1.44 Total: 1.38 kcal Atomic # 6 Polarization: 5.60 SS G_CDS: -1.87 Total: 3.74 kcal Atomic # 7 Polarization: -39.93 SS G_CDS: 0.17 Total: -39.75 kcal Atomic # 8 Polarization: -16.21 SS G_CDS: 0.08 Total: -16.13 kcal Atomic # 9 Polarization: -2.09 SS G_CDS: 0.04 Total: -2.06 kcal Atomic # 14 Polarization: 19.80 SS G_CDS: -5.03 Total: 14.78 kcal Atomic # 17 Polarization: -0.41 SS G_CDS: -1.51 Total: -1.92 kcal Total LS contribution 4.15 Total: 4.15 kcal Total: -30.42 -5.40 -35.82 kcal The number of atoms in the molecule is 28 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000798805544.mol2 28 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 78.483 kcal (2) G-P(sol) polarization free energy of solvation -30.415 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 48.068 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.402 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.817 kcal (6) G-S(sol) free energy of system = (1) + (5) 42.666 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.36 seconds