Wall clock time and date at job start Fri Apr 10 2020 14:59:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17406 * 1 3 3 C 1.47196 * 179.97438 * 2 1 4 4 N 1.46498 * 109.47294 * 61.83548 * 3 2 1 5 5 C 1.36811 * 120.00283 * 98.91191 * 4 3 2 6 6 H 1.08001 * 120.00012 * 161.71627 * 5 4 3 7 7 C 1.39090 * 119.99459 * 341.72075 * 5 4 3 8 8 N 1.31334 * 120.00365 * 339.08043 * 7 5 4 9 9 Si 1.86804 * 119.99560 * 159.08814 * 7 5 4 10 10 H 1.48499 * 109.47221 * 94.98262 * 9 7 5 11 11 H 1.48501 * 109.46657 * 214.97745 * 9 7 5 12 12 H 1.48497 * 109.47276 * 334.97880 * 9 7 5 13 13 C 1.34783 * 119.99810 * 278.91430 * 4 3 2 14 14 O 1.21588 * 119.99762 * 179.21722 * 13 4 3 15 15 C 1.47843 * 120.00110 * 359.48985 * 13 4 3 16 16 N 1.32897 * 119.75361 * 2.73274 * 15 13 4 17 17 C 1.31462 * 121.68685 * 179.75179 * 16 15 13 18 18 C 1.38617 * 120.99959 * 0.52726 * 17 16 15 19 19 C 1.38624 * 119.39594 * 359.74891 * 18 17 16 20 20 Cl 1.73595 * 120.77469 * 179.97438 * 19 18 17 21 21 C 1.39067 * 118.44630 * 359.97438 * 19 18 17 22 22 F 1.35099 * 120.50641 * 180.02562 * 21 19 18 23 23 H 4.40644 * 5.51414 * 180.02562 * 4 1 2 24 24 H 1.09000 * 109.46871 * 301.83569 * 3 2 1 25 25 H 1.08997 * 109.47213 * 181.83789 * 3 2 1 26 26 H 0.96998 * 119.99979 * 180.02562 * 8 7 5 27 27 H 1.08005 * 119.50299 * 180.29322 * 17 16 15 28 28 H 1.07994 * 120.30415 * 179.71523 * 18 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1741 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 7 3.1347 -0.6510 -1.2176 5 6 3.5354 0.1055 -2.2848 6 1 4.1588 -0.3300 -3.0517 7 6 3.1401 1.4355 -2.3818 8 7 2.0882 1.8580 -1.7187 9 14 4.1054 2.6207 -3.4557 10 1 3.4710 2.7033 -4.7958 11 1 4.1108 3.9660 -2.8269 12 1 5.5015 2.1351 -3.5979 13 6 3.1894 -1.9960 -1.2866 14 8 3.5815 -2.5372 -2.3023 15 6 2.7669 -2.8133 -0.1294 16 7 2.2829 -2.2190 0.9563 17 6 1.8916 -2.9088 2.0048 18 6 1.9794 -4.2920 2.0226 19 6 2.4831 -4.9562 0.9150 20 17 2.6096 -6.6875 0.8991 21 6 2.8845 -4.2032 -0.1830 22 9 3.3809 -4.8076 -1.2846 23 1 -1.0499 0.0001 -0.0003 24 1 3.0096 -0.5413 0.8731 25 1 3.0089 1.0279 0.0330 26 1 1.8123 2.7854 -1.7867 27 1 1.4992 -2.3896 2.8668 28 1 1.6590 -4.8472 2.8918 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001321199549.mol2 28 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 14:59:59 Heat of formation + Delta-G solvation = 44.244347 kcal Electronic energy + Delta-G solvation = -19582.655688 eV Core-core repulsion = 16156.656633 eV Total energy + Delta-G solvation = -3425.999055 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 282.031 amu Computer time = 0.46 seconds Orbital eigenvalues (eV) -48.49563 -40.12384 -38.16381 -36.73484 -35.25981 -32.64905 -31.68705 -31.23493 -30.69831 -26.55700 -25.53545 -23.76908 -23.21403 -20.20002 -17.93675 -17.59152 -17.33426 -16.76891 -16.44599 -15.64415 -15.39973 -14.72434 -14.30490 -14.16343 -14.04562 -13.38610 -13.22000 -12.95408 -12.49772 -12.39059 -12.15905 -12.06894 -11.71558 -11.13527 -11.08959 -10.68283 -10.47944 -9.56722 -9.52651 -9.29974 -9.19524 -8.81834 -8.72722 -8.45628 -7.97087 -6.60138 -3.99402 0.73006 1.00855 1.82998 3.01504 3.14452 3.20442 3.32177 3.73026 4.00496 4.06026 4.14367 4.33790 4.48425 4.67530 4.80875 4.93175 5.11279 5.44123 5.62840 5.66878 5.80752 5.85490 6.48219 6.73107 6.89212 7.11787 7.30781 7.80242 7.91271 8.23731 8.90289 8.93191 9.10776 9.75420 10.37232 Molecular weight = 282.03amu Principal moments of inertia in cm(-1) A = 0.028477 B = 0.005671 C = 0.004926 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 983.012361 B = 4936.270487 C = 5682.965050 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.281 4.281 2 C -0.082 4.082 3 C 0.219 3.781 4 N -0.392 5.392 5 C -0.300 4.300 6 H 0.113 0.887 7 C 0.033 3.967 8 N -0.833 5.833 9 Si 0.929 3.071 10 H -0.275 1.275 11 H -0.279 1.279 12 H -0.264 1.264 13 C 0.462 3.538 14 O -0.576 6.576 15 C 0.098 3.902 16 N -0.429 5.429 17 C 0.099 3.901 18 C -0.151 4.151 19 C -0.039 4.039 20 Cl -0.044 7.044 21 C 0.096 3.904 22 F -0.098 7.098 23 H 0.195 0.805 24 H 0.103 0.897 25 H 0.101 0.899 26 H 0.276 0.724 27 H 0.170 0.830 28 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.213 -6.572 10.236 12.224 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.300 4.300 2 C -0.083 4.083 3 C 0.096 3.904 4 N -0.105 5.105 5 C -0.428 4.428 6 H 0.130 0.870 7 C -0.175 4.175 8 N -0.468 5.468 9 Si 0.754 3.246 10 H -0.200 1.200 11 H -0.204 1.204 12 H -0.188 1.188 13 C 0.251 3.749 14 O -0.461 6.461 15 C -0.042 4.042 16 N -0.141 5.141 17 C -0.060 4.060 18 C -0.173 4.173 19 C -0.074 4.074 20 Cl -0.016 7.016 21 C 0.071 3.929 22 F -0.076 7.076 23 H 0.213 0.787 24 H 0.121 0.879 25 H 0.119 0.881 26 H 0.086 0.914 27 H 0.187 0.813 28 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges -1.109 -5.874 9.677 11.375 hybrid contribution -0.055 -0.528 -0.567 0.777 sum -1.164 -6.403 9.110 11.196 Atomic orbital electron populations 1.24152 0.95280 1.06301 1.04242 1.22838 0.93901 0.95145 0.96442 1.18899 0.84771 0.99446 0.87269 1.43751 1.49989 1.03560 1.13223 1.19972 1.28061 0.92009 1.02804 0.86972 1.25525 0.95327 0.98496 0.98177 1.70103 1.19373 1.17618 1.39690 0.85864 0.80358 0.78832 0.79507 1.20035 1.20375 1.18831 1.17206 0.88881 0.82494 0.86288 1.90700 1.53795 1.70689 1.30905 1.22055 0.97923 0.89527 0.94660 1.68511 1.08569 1.37775 0.99254 1.22999 0.95759 0.90131 0.97150 1.22019 1.01618 0.95912 0.97751 1.21360 1.04189 0.86110 0.95784 1.98380 1.96606 1.08020 1.98546 1.18358 0.99623 0.90766 0.84146 1.91612 1.83870 1.82472 1.49650 0.78742 0.87946 0.88126 0.91365 0.81270 0.83349 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.28 -5.88 19.25 29.55 0.57 -5.31 15 2 C -0.08 -1.84 10.11 -37.12 -0.38 -2.21 15 3 C 0.22 4.90 4.75 -6.83 -0.03 4.87 15 4 N -0.39 -10.03 2.61 -119.02 -0.31 -10.34 15 5 C -0.30 -8.04 9.31 -15.01 -0.14 -8.18 15 6 H 0.11 3.13 7.39 -52.49 -0.39 2.74 15 7 C 0.03 0.82 4.87 -17.45 -0.08 0.74 15 8 N -0.83 -20.88 9.63 55.50 0.53 -20.34 15 9 Si 0.93 19.31 29.60 -169.99 -5.03 14.28 15 10 H -0.27 -5.78 7.11 56.52 0.40 -5.38 15 11 H -0.28 -5.61 7.11 56.52 0.40 -5.21 15 12 H -0.26 -5.47 7.11 56.52 0.40 -5.07 15 13 C 0.46 11.87 7.51 -12.33 -0.09 11.78 15 14 O -0.58 -16.53 14.98 5.29 0.08 -16.45 15 15 C 0.10 2.07 6.60 -82.97 -0.55 1.52 15 16 N -0.43 -7.74 4.81 -9.79 -0.05 -7.79 15 17 C 0.10 1.32 11.18 -17.57 -0.20 1.13 15 18 C -0.15 -1.86 9.93 -39.30 -0.39 -2.25 15 19 C -0.04 -0.60 6.37 -39.13 -0.25 -0.85 15 20 Cl -0.04 -0.59 28.75 -51.86 -1.49 -2.08 15 21 C 0.10 1.86 7.29 -38.77 -0.28 1.57 15 22 F -0.10 -2.10 15.21 2.25 0.03 -2.07 15 23 H 0.20 3.37 7.80 -54.10 -0.42 2.95 15 24 H 0.10 2.06 5.44 -51.93 -0.28 1.77 15 25 H 0.10 2.33 6.27 -51.93 -0.33 2.00 15 26 H 0.28 6.50 8.31 -40.82 -0.34 6.16 15 27 H 0.17 1.61 8.06 -52.48 -0.42 1.19 15 28 H 0.15 1.27 8.06 -52.49 -0.42 0.85 15 LS Contribution 275.39 15.07 4.15 4.15 Total: -1.00 -30.53 275.39 -5.30 -35.83 By element: Atomic # 1 Polarization: 3.40 SS G_CDS: -1.40 Total: 2.00 kcal Atomic # 6 Polarization: 4.63 SS G_CDS: -1.82 Total: 2.80 kcal Atomic # 7 Polarization: -38.65 SS G_CDS: 0.18 Total: -38.47 kcal Atomic # 8 Polarization: -16.53 SS G_CDS: 0.08 Total: -16.45 kcal Atomic # 9 Polarization: -2.10 SS G_CDS: 0.03 Total: -2.07 kcal Atomic # 14 Polarization: 19.31 SS G_CDS: -5.03 Total: 14.28 kcal Atomic # 17 Polarization: -0.59 SS G_CDS: -1.49 Total: -2.08 kcal Total LS contribution 4.15 Total: 4.15 kcal Total: -30.53 -5.30 -35.83 kcal The number of atoms in the molecule is 28 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001321199549.mol2 28 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 80.078 kcal (2) G-P(sol) polarization free energy of solvation -30.532 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 49.547 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.302 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.834 kcal (6) G-S(sol) free energy of system = (1) + (5) 44.244 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds