Wall clock time and date at job start Fri Apr 10 2020 14:58:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 H 1.09002 * 109.47153 * 2 1 4 4 O 1.42898 * 109.47319 * 120.00307 * 2 1 3 5 5 C 1.34929 * 116.99980 * 270.00102 * 4 2 1 6 6 H 1.08009 * 119.99811 * 0.02562 * 5 4 2 7 7 C 1.38633 * 120.00259 * 179.97438 * 5 4 2 8 8 N 1.31582 * 120.00025 * 0.02562 * 7 5 4 9 9 Si 1.86797 * 120.00000 * 179.97438 * 7 5 4 10 10 H 1.48502 * 109.47093 * 60.00397 * 9 7 5 11 11 H 1.48504 * 109.46990 * 180.02562 * 9 7 5 12 12 H 1.48497 * 109.47245 * 300.00113 * 9 7 5 13 13 C 1.50699 * 109.47078 * 240.00207 * 2 1 3 14 14 C 1.38414 * 119.97974 * 284.72911 * 13 2 1 15 15 F 1.35103 * 119.99015 * 359.97034 * 14 13 2 16 16 C 1.38598 * 120.01674 * 179.72984 * 14 13 2 17 17 F 1.35102 * 120.01006 * 180.26732 * 16 14 13 18 18 C 1.38568 * 119.98044 * 0.54082 * 16 14 13 19 19 F 1.35101 * 120.01616 * 179.75594 * 18 16 14 20 20 C 1.38570 * 119.96404 * 359.72786 * 18 16 14 21 21 F 1.35099 * 120.00756 * 180.02562 * 20 18 16 22 22 C 1.38409 * 119.98157 * 104.99887 * 13 2 1 23 23 F 1.35101 * 119.99144 * 359.97438 * 22 13 2 24 24 H 1.08996 * 109.47853 * 59.99972 * 1 2 3 25 25 H 1.09002 * 109.47153 * 180.02562 * 1 2 3 26 26 H 1.08998 * 109.47533 * 299.99629 * 1 2 3 27 27 H 0.96995 * 120.00066 * 179.97438 * 8 7 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0277 0.0000 4 8 2.0063 -0.6737 1.1667 5 6 2.2105 0.0787 2.2680 6 1 2.0140 1.1404 2.2408 7 6 2.6715 -0.5112 3.4348 8 7 2.9105 -1.8047 3.4682 9 14 2.9549 0.5305 4.9592 10 1 1.6791 1.1746 5.3628 11 1 3.4456 -0.3321 6.0640 12 1 3.9657 1.5771 4.6627 13 6 2.0323 -0.7104 -1.2305 14 6 1.9754 -2.0914 -1.3035 15 9 1.4702 -2.8020 -0.2714 16 6 2.4320 -2.7452 -2.4371 17 9 2.3715 -4.0928 -2.5104 18 6 2.9559 -2.0165 -3.4929 19 9 3.4057 -2.6534 -4.5962 20 6 3.0176 -0.6343 -3.4167 21 9 3.5277 0.0770 -4.4458 22 6 2.5554 0.0182 -2.2846 23 9 2.6149 1.3659 -2.2103 24 1 -0.3635 0.5138 -0.8899 25 1 -0.3633 -1.0277 0.0005 26 1 -0.3634 0.5137 0.8900 27 1 3.2334 -2.2174 4.2844 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001224379178.mol2 27 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 14:58:47 Heat of formation + Delta-G solvation = -223.522602 kcal Electronic energy + Delta-G solvation = -22430.906595 eV Core-core repulsion = 17990.810427 eV Total energy + Delta-G solvation = -4440.096168 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 282.042 amu Computer time = 0.32 seconds Orbital eigenvalues (eV) -50.02718 -49.67047 -49.18910 -48.65891 -48.30091 -38.89897 -36.64965 -32.71633 -31.13487 -30.03693 -28.84389 -24.95305 -24.04979 -23.40210 -21.14452 -19.16685 -18.76031 -18.03867 -17.60507 -17.29529 -16.68219 -16.45210 -15.98832 -15.91300 -15.65134 -15.38494 -15.00123 -14.76574 -14.54873 -14.37201 -14.25830 -14.04248 -13.47827 -13.02084 -12.74866 -12.30080 -11.92459 -11.72694 -11.32001 -11.29477 -11.02989 -10.70945 -10.30195 -9.94974 -9.37626 -8.92195 -8.78131 -8.14094 -6.05120 -3.71670 0.30880 0.36090 2.63623 2.86730 3.26394 3.28380 3.31648 3.48962 3.69752 3.91980 4.03706 4.21066 4.27309 4.78708 5.00257 5.19111 5.28540 5.47756 5.63612 5.71889 5.80292 5.90812 6.33708 6.37071 6.49952 6.72121 7.35468 8.30427 9.36303 9.93509 11.14086 Molecular weight = 282.04amu Principal moments of inertia in cm(-1) A = 0.022671 B = 0.005890 C = 0.005222 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1234.744529 B = 4752.478721 C = 5360.501527 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.165 4.165 2 C 0.128 3.872 3 H 0.069 0.931 4 O -0.271 6.271 5 C -0.371 4.371 6 H 0.067 0.933 7 C 0.030 3.970 8 N -0.881 5.881 9 Si 0.926 3.074 10 H -0.277 1.277 11 H -0.283 1.283 12 H -0.277 1.277 13 C -0.097 4.097 14 C 0.159 3.841 15 F -0.077 7.077 16 C 0.044 3.956 17 F -0.106 7.106 18 C 0.084 3.916 19 F -0.105 7.105 20 C 0.045 3.955 21 F -0.109 7.109 22 C 0.126 3.874 23 F -0.104 7.104 24 H 0.050 0.950 25 H 0.061 0.939 26 H 0.072 0.928 27 H 0.261 0.739 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.106 1.615 -12.785 13.058 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.223 4.223 2 C 0.068 3.932 3 H 0.086 0.914 4 O -0.186 6.186 5 C -0.449 4.449 6 H 0.085 0.915 7 C -0.170 4.170 8 N -0.523 5.523 9 Si 0.753 3.247 10 H -0.202 1.202 11 H -0.208 1.208 12 H -0.203 1.203 13 C -0.099 4.099 14 C 0.138 3.862 15 F -0.054 7.054 16 C 0.023 3.977 17 F -0.084 7.084 18 C 0.063 3.937 19 F -0.083 7.083 20 C 0.023 3.977 21 F -0.087 7.087 22 C 0.105 3.895 23 F -0.082 7.082 24 H 0.069 0.931 25 H 0.080 0.920 26 H 0.091 0.909 27 H 0.071 0.929 Dipole moment (debyes) X Y Z Total from point charges -1.994 1.250 -12.696 12.913 hybrid contribution 0.309 0.550 0.469 0.786 sum -1.685 1.800 -12.228 12.474 Atomic orbital electron populations 1.22290 0.95663 1.02617 1.01687 1.20506 0.93486 0.94690 0.84488 0.91355 1.85784 1.83715 1.32929 1.16127 1.20808 1.44906 0.91126 0.88082 0.91513 1.24949 0.98274 0.96057 0.97710 1.70014 1.45537 1.09150 1.27570 0.86030 0.78521 0.78937 0.81200 1.20240 1.20813 1.20276 1.20190 1.00194 0.92044 0.97479 1.16760 0.96785 0.88608 0.84043 1.91748 1.82749 1.76660 1.54247 1.17201 1.07196 0.78722 0.94616 1.91591 1.94322 1.26263 1.96248 1.16673 1.03534 0.88202 0.85340 1.91587 1.86501 1.81181 1.49069 1.16953 1.05855 0.87550 0.87343 1.91576 1.84569 1.77155 1.55412 1.16619 1.01395 0.78463 0.93021 1.91584 1.93875 1.26673 1.96092 0.93135 0.92040 0.90944 0.92941 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -2.85 9.47 37.16 0.35 -2.50 15 2 C 0.13 2.57 2.74 -27.88 -0.08 2.49 15 3 H 0.07 1.33 6.92 -51.93 -0.36 0.98 15 4 O -0.27 -7.11 8.12 -16.51 -0.13 -7.24 15 5 C -0.37 -10.17 9.77 30.88 0.30 -9.87 15 6 H 0.07 1.71 7.65 -52.48 -0.40 1.31 15 7 C 0.03 0.83 5.49 -17.51 -0.10 0.74 15 8 N -0.88 -26.53 13.67 55.48 0.76 -25.77 15 9 Si 0.93 21.20 29.55 -169.99 -5.02 16.17 15 10 H -0.28 -6.13 7.11 56.52 0.40 -5.73 15 11 H -0.28 -6.43 7.11 56.52 0.40 -6.03 15 12 H -0.28 -6.17 7.11 56.52 0.40 -5.77 15 13 C -0.10 -1.68 4.98 -104.49 -0.52 -2.20 15 14 C 0.16 2.80 7.01 -39.38 -0.28 2.53 15 15 F -0.08 -1.58 15.33 2.25 0.03 -1.55 15 16 C 0.04 0.68 7.31 -39.33 -0.29 0.39 15 17 F -0.11 -1.65 17.09 2.25 0.04 -1.61 15 18 C 0.08 1.18 7.31 -39.34 -0.29 0.89 15 19 F -0.11 -1.44 17.09 2.25 0.04 -1.40 15 20 C 0.04 0.62 7.31 -39.33 -0.29 0.34 15 21 F -0.11 -1.49 17.09 2.25 0.04 -1.45 15 22 C 0.13 1.92 7.25 -39.38 -0.29 1.63 15 23 F -0.10 -1.58 16.17 2.25 0.04 -1.54 15 24 H 0.05 0.70 8.14 -51.93 -0.42 0.28 15 25 H 0.06 1.08 7.68 -51.93 -0.40 0.68 15 26 H 0.07 1.28 8.14 -51.93 -0.42 0.86 15 27 H 0.26 7.37 8.31 -40.82 -0.34 7.03 15 LS Contribution 270.94 15.07 4.08 4.08 Total: -1.00 -29.53 270.94 -2.73 -32.26 By element: Atomic # 1 Polarization: -5.25 SS G_CDS: -1.14 Total: -6.39 kcal Atomic # 6 Polarization: -4.10 SS G_CDS: -1.46 Total: -5.56 kcal Atomic # 7 Polarization: -26.53 SS G_CDS: 0.76 Total: -25.77 kcal Atomic # 8 Polarization: -7.11 SS G_CDS: -0.13 Total: -7.24 kcal Atomic # 9 Polarization: -7.74 SS G_CDS: 0.19 Total: -7.55 kcal Atomic # 14 Polarization: 21.20 SS G_CDS: -5.02 Total: 16.17 kcal Total LS contribution 4.08 Total: 4.08 kcal Total: -29.53 -2.73 -32.26 kcal The number of atoms in the molecule is 27 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001224379178.mol2 27 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -191.263 kcal (2) G-P(sol) polarization free energy of solvation -29.528 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -220.791 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.732 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.259 kcal (6) G-S(sol) free energy of system = (1) + (5) -223.523 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.32 seconds