Wall clock time and date at job start Fri Apr 10 2020 14:58:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13599 * 1 3 3 C 1.47202 * 179.97438 * 2 1 4 4 C 1.52998 * 109.47352 * 269.83434 * 3 2 1 5 5 N 1.46498 * 109.47196 * 180.02562 * 4 3 2 6 6 C 1.46502 * 119.99445 * 270.84919 * 5 4 3 7 7 C 1.50704 * 109.46860 * 262.18933 * 6 5 4 8 8 H 1.08003 * 119.99977 * 0.02562 * 7 6 5 9 9 C 1.37871 * 119.99700 * 180.02562 * 7 6 5 10 10 N 1.31518 * 120.00355 * 0.02562 * 9 7 6 11 11 Si 1.86807 * 119.99637 * 180.02562 * 9 7 6 12 12 H 1.48496 * 109.47280 * 0.02562 * 11 9 7 13 13 H 1.48509 * 109.46957 * 120.00423 * 11 9 7 14 14 H 1.48502 * 109.47107 * 239.99775 * 11 9 7 15 15 C 1.34773 * 120.00020 * 90.84737 * 5 4 3 16 16 O 1.21632 * 119.99993 * 1.38765 * 15 5 4 17 17 C 1.47214 * 119.99981 * 181.38863 * 15 5 4 18 18 C 1.47086 * 127.20239 * 351.30563 * 17 15 5 19 19 C 1.34120 * 105.97114 * 179.97438 * 18 17 15 20 20 O 1.34288 * 109.17994 * 359.97438 * 19 18 17 21 21 C 1.33685 * 110.91260 * 0.02562 * 20 19 18 22 22 Cl 1.73597 * 125.82541 * 180.25883 * 21 20 19 23 23 H 1.09002 * 109.46483 * 149.83846 * 3 2 1 24 24 H 1.08996 * 109.47237 * 29.84082 * 3 2 1 25 25 H 1.09002 * 109.46891 * 60.00175 * 4 3 2 26 26 H 1.08998 * 109.46818 * 300.00853 * 4 3 2 27 27 H 1.08995 * 109.47661 * 22.19664 * 6 5 4 28 28 H 1.09004 * 109.46669 * 142.19790 * 6 5 4 29 29 H 0.96999 * 119.99643 * 180.02562 * 10 9 7 30 30 H 1.07995 * 127.01734 * 0.02562 * 18 17 15 31 31 H 1.08003 * 125.41251 * 180.02562 * 19 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 6 3.1181 0.0051 1.4425 5 7 4.5830 0.0063 1.4424 6 6 5.3165 -1.2618 1.4271 7 6 5.7352 -1.6169 2.8306 8 1 5.4800 -0.9635 3.6518 9 6 6.4440 -2.7758 3.0661 10 7 6.7551 -3.5711 2.0659 11 14 6.9623 -3.2163 4.8059 12 1 6.4924 -2.1651 5.7436 13 1 6.3635 -4.5212 5.1854 14 1 8.4427 -3.3132 4.8717 15 6 5.2559 1.1740 1.4565 16 8 4.6471 2.2263 1.4947 17 6 6.7277 1.1758 1.4255 18 6 7.6214 0.0149 1.5559 19 6 8.8694 0.4981 1.4672 20 8 8.8161 1.8291 1.2966 21 6 7.5496 2.2562 1.2687 22 17 7.0366 3.9016 1.0610 23 1 2.9708 0.8894 -0.5164 24 1 2.9717 -0.8905 -0.5113 25 1 2.7551 -0.8836 1.9588 26 1 2.7542 0.8963 1.9537 27 1 4.6749 -2.0480 1.0294 28 1 6.2013 -1.1621 0.7983 29 1 7.2535 -4.3866 2.2318 30 1 7.3318 -1.0163 1.6938 31 1 9.7736 -0.0898 1.5233 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000192394403.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 14:58:36 Heat of formation + Delta-G solvation = 24.119003 kcal Electronic energy + Delta-G solvation = -19688.750972 eV Core-core repulsion = 16385.339522 eV Total energy + Delta-G solvation = -3303.411450 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 282.056 amu Computer time = 0.32 seconds Orbital eigenvalues (eV) -42.10883 -39.11994 -36.74235 -36.60165 -35.36659 -33.48617 -32.35371 -30.85125 -29.06604 -27.42837 -24.76370 -23.36622 -21.83945 -20.95278 -19.01228 -17.57813 -17.07869 -16.56532 -16.26802 -15.91964 -15.46671 -14.78930 -14.66705 -14.24118 -14.07556 -13.33475 -13.11902 -12.88466 -12.59543 -12.40305 -12.30836 -12.14565 -11.84554 -11.64570 -11.12028 -11.09285 -10.89312 -10.73405 -10.42343 -10.11150 -9.91754 -9.33821 -9.27455 -8.72569 -8.25602 -7.89592 -6.38216 -4.44438 1.44248 1.60543 2.65315 2.85634 2.93870 3.11762 3.22317 3.27207 3.61252 3.88615 3.91212 4.19923 4.35808 4.94584 5.12939 5.27565 5.31269 5.38737 5.65762 5.88051 5.93558 6.09773 6.23023 6.37762 6.51500 6.99693 7.07761 7.33501 7.37403 7.59564 7.69786 7.84524 8.08855 8.62169 8.84505 9.21503 10.66251 Molecular weight = 282.06amu Principal moments of inertia in cm(-1) A = 0.009751 B = 0.009073 C = 0.005119 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2870.946981 B = 3085.285676 C = 5468.812186 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.450 5.450 2 C 0.221 3.779 3 C -0.046 4.046 4 C 0.127 3.873 5 N -0.588 5.588 6 C 0.214 3.786 7 C -0.535 4.535 8 H 0.066 0.934 9 C 0.065 3.935 10 N -0.888 5.888 11 Si 0.893 3.107 12 H -0.271 1.271 13 H -0.281 1.281 14 H -0.280 1.280 15 C 0.588 3.412 16 O -0.557 6.557 17 C -0.190 4.190 18 C -0.157 4.157 19 C -0.064 4.064 20 O -0.180 6.180 21 C 0.076 3.924 22 Cl 0.037 6.963 23 H 0.110 0.890 24 H 0.112 0.888 25 H 0.089 0.911 26 H 0.085 0.915 27 H 0.042 0.958 28 H 0.057 0.943 29 H 0.269 0.731 30 H 0.227 0.773 31 H 0.210 0.790 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.693 5.538 -3.345 7.449 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.128 5.128 2 C -0.096 4.096 3 C -0.088 4.088 4 C 0.002 3.998 5 N -0.317 5.317 6 C 0.095 3.905 7 C -0.574 4.574 8 H 0.084 0.916 9 C -0.139 4.139 10 N -0.526 5.526 11 Si 0.720 3.280 12 H -0.195 1.195 13 H -0.207 1.207 14 H -0.206 1.206 15 C 0.378 3.622 16 O -0.438 6.438 17 C -0.196 4.196 18 C -0.175 4.175 19 C -0.129 4.129 20 O -0.078 6.078 21 C -0.003 4.003 22 Cl 0.066 6.934 23 H 0.128 0.872 24 H 0.130 0.870 25 H 0.107 0.893 26 H 0.103 0.897 27 H 0.060 0.940 28 H 0.075 0.925 29 H 0.078 0.922 30 H 0.243 0.757 31 H 0.226 0.774 Dipole moment (debyes) X Y Z Total from point charges 1.969 6.199 -3.416 7.346 hybrid contribution 0.814 -0.442 1.006 1.368 sum 2.783 5.756 -2.410 6.833 Atomic orbital electron populations 1.81179 1.13083 1.09686 1.08845 1.29107 0.95115 0.92510 0.92915 1.19798 0.81304 1.06091 1.01563 1.21138 0.81211 1.04246 0.93241 1.47916 1.05108 1.07843 1.70871 1.20168 0.93223 0.79261 0.97850 1.21549 1.35516 1.06785 0.93525 0.91586 1.24936 0.95715 0.95683 0.97553 1.69922 1.38856 1.13067 1.30755 0.86486 0.78513 0.78653 0.84316 1.19512 1.20729 1.20597 1.17088 0.85379 0.83567 0.76182 1.90743 1.69504 1.31329 1.52247 1.21087 0.94605 0.92006 1.11875 1.24978 0.89987 1.03179 0.99369 1.24071 1.00951 0.78436 1.09424 1.83615 1.26845 1.25570 1.71790 1.22492 0.83085 0.88210 1.06475 1.98428 1.86824 1.12826 1.95359 0.87242 0.86952 0.89312 0.89709 0.93957 0.92530 0.92165 0.75690 0.77391 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.45 -7.38 18.54 42.15 0.78 -6.60 16 2 C 0.22 3.10 15.43 -20.76 -0.32 2.78 16 3 C -0.05 -0.57 6.03 -29.52 -0.18 -0.75 16 4 C 0.13 1.94 5.35 -4.04 -0.02 1.92 16 5 N -0.59 -10.75 2.48 -176.41 -0.44 -11.19 16 6 C 0.21 4.32 4.70 -5.19 -0.02 4.30 16 7 C -0.54 -12.12 7.09 -34.44 -0.24 -12.36 16 8 H 0.07 1.59 7.81 -52.48 -0.41 1.18 16 9 C 0.06 1.49 4.75 -17.82 -0.08 1.41 16 10 N -0.89 -21.14 13.21 55.43 0.73 -20.41 16 11 Si 0.89 18.70 29.54 -169.99 -5.02 13.68 16 12 H -0.27 -5.80 7.11 56.52 0.40 -5.40 16 13 H -0.28 -5.98 7.11 56.52 0.40 -5.57 16 14 H -0.28 -5.80 7.11 56.52 0.40 -5.40 16 15 C 0.59 11.53 7.59 -12.62 -0.10 11.43 16 16 O -0.56 -11.45 15.26 5.25 0.08 -11.37 16 17 C -0.19 -3.63 6.09 -103.24 -0.63 -4.26 16 18 C -0.16 -2.92 8.21 -37.44 -0.31 -3.22 16 19 C -0.06 -1.00 12.03 29.28 0.35 -0.65 16 20 O -0.18 -2.96 10.53 7.37 0.08 -2.89 16 21 C 0.08 1.35 7.98 30.16 0.24 1.59 16 22 Cl 0.04 0.58 27.96 -51.86 -1.45 -0.87 16 23 H 0.11 1.32 8.14 -51.93 -0.42 0.89 16 24 H 0.11 1.25 8.14 -51.93 -0.42 0.82 16 25 H 0.09 1.33 8.08 -51.93 -0.42 0.91 16 26 H 0.08 1.34 7.37 -51.93 -0.38 0.96 16 27 H 0.04 0.87 8.01 -51.93 -0.42 0.45 16 28 H 0.06 1.18 4.75 -51.93 -0.25 0.93 16 29 H 0.27 6.15 8.31 -40.82 -0.34 5.81 16 30 H 0.23 4.64 3.10 -52.49 -0.16 4.48 16 31 H 0.21 2.45 8.06 -52.48 -0.42 2.03 16 LS Contribution 295.86 15.07 4.46 4.46 Total: -1.00 -26.38 295.86 -4.53 -30.91 By element: Atomic # 1 Polarization: 4.54 SS G_CDS: -2.44 Total: 2.10 kcal Atomic # 6 Polarization: 3.49 SS G_CDS: -1.31 Total: 2.18 kcal Atomic # 7 Polarization: -39.27 SS G_CDS: 1.08 Total: -38.20 kcal Atomic # 8 Polarization: -14.41 SS G_CDS: 0.16 Total: -14.26 kcal Atomic # 14 Polarization: 18.70 SS G_CDS: -5.02 Total: 13.68 kcal Atomic # 17 Polarization: 0.58 SS G_CDS: -1.45 Total: -0.87 kcal Total LS contribution 4.46 Total: 4.46 kcal Total: -26.38 -4.53 -30.91 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000192394403.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 55.030 kcal (2) G-P(sol) polarization free energy of solvation -26.379 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 28.651 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.532 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.911 kcal (6) G-S(sol) free energy of system = (1) + (5) 24.119 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.32 seconds