Wall clock time and date at job start Fri Apr 10 2020 15:00:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 O 1.45202 * 109.47440 * 2 1 4 4 C 1.34222 * 117.00492 * 180.02562 * 3 2 1 5 5 O 1.20831 * 120.00034 * 359.97438 * 4 3 2 6 6 C 1.50696 * 120.00345 * 180.02562 * 4 3 2 7 7 N 1.46507 * 109.47376 * 179.97438 * 6 4 3 8 8 C 1.39929 * 119.99805 * 179.97438 * 7 6 4 9 9 C 1.38713 * 120.08073 * 0.02562 * 8 7 6 10 10 C 1.38220 * 120.01474 * 179.97438 * 9 8 7 11 11 C 1.38522 * 120.17625 * 0.02562 * 10 9 8 12 12 F 1.35098 * 119.92139 * 179.97438 * 11 10 9 13 13 C 1.38364 * 120.16003 * 359.97438 * 11 10 9 14 14 C 1.38720 * 119.97940 * 359.97438 * 13 11 10 15 15 O 1.35794 * 120.08317 * 180.29569 * 14 13 11 16 16 C 1.34801 * 117.00313 * 354.40795 * 15 14 13 17 17 H 1.07999 * 119.99778 * 5.07674 * 16 15 14 18 18 C 1.38629 * 119.99953 * 185.06987 * 16 15 14 19 19 N 1.31578 * 120.00246 * 0.02562 * 18 16 15 20 20 Si 1.86802 * 119.99841 * 180.02562 * 18 16 15 21 21 H 1.48496 * 109.46986 * 359.97438 * 20 18 16 22 22 H 1.48494 * 109.47096 * 120.00320 * 20 18 16 23 23 H 1.48499 * 109.46790 * 239.99949 * 20 18 16 24 24 H 1.09001 * 109.47041 * 60.00016 * 1 2 3 25 25 H 1.08993 * 109.47035 * 180.02562 * 1 2 3 26 26 H 1.09002 * 109.47192 * 300.00311 * 1 2 3 27 27 H 1.08994 * 109.47347 * 239.99416 * 2 1 3 28 28 H 1.09004 * 109.47001 * 119.99220 * 2 1 3 29 29 H 1.09001 * 109.47753 * 59.99266 * 6 4 3 30 30 H 1.09003 * 109.46874 * 299.99469 * 6 4 3 31 31 H 0.96996 * 119.99575 * 359.97438 * 7 6 4 32 32 H 1.07995 * 119.99180 * 359.97438 * 9 8 7 33 33 H 1.08000 * 119.90951 * 180.02562 * 10 9 8 34 34 H 1.07997 * 120.00821 * 180.02562 * 13 11 10 35 35 H 0.97003 * 120.00089 * 179.97438 * 19 18 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0141 1.3689 0.0000 4 6 3.3447 1.5449 -0.0005 5 8 4.0808 0.5866 -0.0005 6 6 3.9207 2.9374 0.0000 7 7 5.3838 2.8607 -0.0001 8 6 6.1459 4.0343 -0.0002 9 6 5.5178 5.2711 0.0003 10 6 6.2719 6.4295 0.0008 11 6 7.6553 6.3597 0.0001 12 9 8.3873 7.4952 0.0000 13 6 8.2894 5.1299 -0.0004 14 6 7.5390 3.9632 0.0002 15 8 8.1590 2.7551 0.0057 16 6 9.5024 2.7561 -0.1067 17 1 10.0430 3.6910 -0.1131 18 6 10.1898 1.5570 -0.2138 19 7 9.5311 0.4180 -0.2063 20 14 12.0514 1.5584 -0.3688 21 1 12.5484 2.9576 -0.3526 22 1 12.6433 0.8091 0.7684 23 1 12.4422 0.9095 -1.6461 24 1 -0.3633 0.5138 -0.8900 25 1 -0.3633 -1.0276 0.0005 26 1 -0.3634 0.5139 0.8900 27 1 1.8933 -0.5139 -0.8899 28 1 1.8933 -0.5137 0.8901 29 1 3.5852 3.4691 0.8904 30 1 3.5844 3.4700 -0.8896 31 1 5.8241 1.9964 -0.0001 32 1 4.4394 5.3289 0.0004 33 1 5.7811 7.3915 0.0016 34 1 9.3681 5.0784 -0.0005 35 1 10.0122 -0.4210 -0.2817 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000150765844.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 15:00:31 Heat of formation + Delta-G solvation = -128.125715 kcal Electronic energy + Delta-G solvation = -21527.083410 eV Core-core repulsion = 17826.848191 eV Total energy + Delta-G solvation = -3700.235219 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 283.105 amu Computer time = 0.38 seconds Orbital eigenvalues (eV) -48.08089 -40.53664 -39.18327 -37.00872 -36.42787 -34.51023 -32.30961 -31.97104 -29.38412 -29.25174 -26.25982 -25.40412 -23.42044 -22.07620 -21.30517 -20.64227 -18.24079 -18.18502 -17.29504 -16.83664 -16.71567 -15.84908 -15.30443 -15.11458 -14.94384 -14.72302 -14.26297 -14.13158 -13.73087 -13.50754 -13.32462 -13.15484 -12.99882 -12.78007 -12.13998 -12.06344 -11.94530 -11.76252 -11.43447 -11.32361 -10.89244 -10.67275 -10.59272 -10.47371 -10.40242 -9.59125 -9.38714 -8.86420 -7.78209 -6.54869 -6.46505 -4.03384 2.06834 2.15767 2.21858 2.42854 3.12586 3.14705 3.20333 3.90888 3.99940 4.42471 4.57802 4.73121 4.79532 4.94056 5.07711 5.08166 5.24277 5.29005 5.33239 5.45358 5.55204 5.55243 5.72527 5.79973 6.04757 6.30765 6.35258 6.52671 6.76981 6.98118 7.07055 7.23306 7.53333 7.69460 7.86139 7.97941 8.33280 8.98153 9.63254 10.70222 Molecular weight = 283.11amu Principal moments of inertia in cm(-1) A = 0.012843 B = 0.004947 C = 0.003584 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2179.696094 B = 5658.663081 C = 7809.776926 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C 0.061 3.939 3 O -0.359 6.359 4 C 0.454 3.546 5 O -0.489 6.489 6 C 0.144 3.856 7 N -0.740 5.740 8 C 0.150 3.850 9 C -0.144 4.144 10 C -0.198 4.198 11 C 0.092 3.908 12 F -0.157 7.157 13 C -0.242 4.242 14 C 0.126 3.874 15 O -0.173 6.173 16 C -0.389 4.389 17 H 0.093 0.907 18 C 0.040 3.960 19 N -0.858 5.858 20 Si 0.941 3.059 21 H -0.266 1.266 22 H -0.276 1.276 23 H -0.276 1.276 24 H 0.066 0.934 25 H 0.079 0.921 26 H 0.066 0.934 27 H 0.071 0.929 28 H 0.071 0.929 29 H 0.096 0.904 30 H 0.096 0.904 31 H 0.421 0.579 32 H 0.122 0.878 33 H 0.118 0.882 34 H 0.139 0.861 35 H 0.270 0.730 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -14.408 2.966 0.219 14.712 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C -0.013 4.013 3 O -0.277 6.277 4 C 0.296 3.704 5 O -0.375 6.375 6 C 0.017 3.983 7 N -0.381 5.381 8 C 0.050 3.950 9 C -0.168 4.168 10 C -0.218 4.218 11 C 0.071 3.929 12 F -0.136 7.136 13 C -0.264 4.264 14 C 0.070 3.930 15 O -0.076 6.076 16 C -0.465 4.465 17 H 0.111 0.889 18 C -0.165 4.165 19 N -0.492 5.492 20 Si 0.766 3.234 21 H -0.190 1.190 22 H -0.201 1.201 23 H -0.201 1.201 24 H 0.085 0.915 25 H 0.097 0.903 26 H 0.085 0.915 27 H 0.089 0.911 28 H 0.089 0.911 29 H 0.114 0.886 30 H 0.114 0.886 31 H 0.260 0.740 32 H 0.140 0.860 33 H 0.136 0.864 34 H 0.157 0.843 35 H 0.080 0.920 Dipole moment (debyes) X Y Z Total from point charges -14.382 2.204 0.225 14.551 hybrid contribution 1.268 -0.272 -0.087 1.300 sum -13.113 1.932 0.138 13.256 Atomic orbital electron populations 1.21801 0.92589 1.02942 1.03498 1.23044 0.95255 0.80089 1.02912 1.86456 1.24223 1.32591 1.84381 1.23715 0.80809 0.92946 0.72935 1.90756 1.60063 1.42688 1.43961 1.20454 0.83603 0.89943 1.04276 1.44079 1.01504 1.07688 1.84785 1.16981 0.87385 0.86479 1.04133 1.19948 0.98560 0.89631 1.08660 1.20273 0.91460 0.98317 1.11794 1.17252 0.88941 0.81143 1.05574 1.91383 1.77931 1.49715 1.94533 1.20789 1.01288 0.90219 1.14063 1.18558 0.89632 0.86706 0.98057 1.83919 1.22446 1.22404 1.78848 1.21357 0.78319 0.94687 1.52134 0.88921 1.25285 1.00542 0.94137 0.96490 1.70058 1.36187 0.97495 1.45474 0.85641 0.80604 0.78920 0.78268 1.19008 1.20141 1.20142 0.91455 0.90258 0.91462 0.91067 0.91075 0.88600 0.88604 0.73978 0.85991 0.86378 0.84303 0.92010 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.05 10.29 37.16 0.38 -0.67 16 2 C 0.06 0.62 6.19 37.16 0.23 0.85 16 3 O -0.36 -4.39 10.22 -39.24 -0.40 -4.79 16 4 C 0.45 6.69 8.03 36.00 0.29 6.98 16 5 O -0.49 -9.17 15.42 -18.75 -0.29 -9.46 16 6 C 0.14 1.95 5.51 -5.19 -0.03 1.92 16 7 N -0.74 -13.90 5.70 -59.63 -0.34 -14.24 16 8 C 0.15 3.02 6.67 -83.52 -0.56 2.46 16 9 C -0.14 -2.43 9.31 -39.41 -0.37 -2.80 16 10 C -0.20 -3.45 10.02 -39.48 -0.40 -3.85 16 11 C 0.09 1.83 7.29 -39.43 -0.29 1.54 16 12 F -0.16 -3.04 17.26 2.25 0.04 -3.00 16 13 C -0.24 -5.40 9.14 -39.36 -0.36 -5.76 16 14 C 0.13 2.98 6.67 -38.94 -0.26 2.72 16 15 O -0.17 -4.76 9.00 -0.01 0.00 -4.76 16 16 C -0.39 -10.75 9.49 30.88 0.29 -10.46 16 17 H 0.09 2.40 5.21 -52.49 -0.27 2.13 16 18 C 0.04 1.10 5.49 -17.52 -0.10 1.00 16 19 N -0.86 -24.96 13.67 55.48 0.76 -24.20 16 20 Si 0.94 20.61 29.55 -169.99 -5.02 15.59 16 21 H -0.27 -5.61 7.11 56.52 0.40 -5.21 16 22 H -0.28 -5.93 7.11 56.52 0.40 -5.52 16 23 H -0.28 -5.93 7.11 56.52 0.40 -5.53 16 24 H 0.07 0.45 8.14 -51.93 -0.42 0.02 16 25 H 0.08 0.42 8.14 -51.93 -0.42 -0.01 16 26 H 0.07 0.44 8.14 -51.93 -0.42 0.02 16 27 H 0.07 0.74 8.13 -51.93 -0.42 0.32 16 28 H 0.07 0.74 8.13 -51.93 -0.42 0.32 16 29 H 0.10 1.08 7.95 -51.93 -0.41 0.67 16 30 H 0.10 1.09 7.95 -51.93 -0.41 0.67 16 31 H 0.42 9.26 6.81 -40.82 -0.28 8.98 16 32 H 0.12 1.60 6.73 -52.49 -0.35 1.24 16 33 H 0.12 1.73 8.06 -52.49 -0.42 1.31 16 34 H 0.14 3.15 5.64 -52.49 -0.30 2.85 16 35 H 0.27 7.24 8.31 -40.82 -0.34 6.90 16 LS Contribution 313.59 15.07 4.73 4.73 Total: -1.00 -31.63 313.59 -5.38 -37.02 By element: Atomic # 1 Polarization: 12.87 SS G_CDS: -3.70 Total: 9.17 kcal Atomic # 6 Polarization: -4.89 SS G_CDS: -1.16 Total: -6.04 kcal Atomic # 7 Polarization: -38.86 SS G_CDS: 0.42 Total: -38.44 kcal Atomic # 8 Polarization: -18.32 SS G_CDS: -0.69 Total: -19.01 kcal Atomic # 9 Polarization: -3.04 SS G_CDS: 0.04 Total: -3.00 kcal Atomic # 14 Polarization: 20.61 SS G_CDS: -5.02 Total: 15.59 kcal Total LS contribution 4.73 Total: 4.73 kcal Total: -31.63 -5.38 -37.02 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000150765844.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -91.110 kcal (2) G-P(sol) polarization free energy of solvation -31.632 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -122.741 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.384 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.016 kcal (6) G-S(sol) free energy of system = (1) + (5) -128.126 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.38 seconds