Wall clock time and date at job start Fri Apr 10 2020 14:59:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 C 1.52999 * 109.46974 * 2 1 4 4 H 1.09005 * 109.47123 * 177.96601 * 3 2 1 5 5 C 1.50696 * 109.47041 * 57.96876 * 3 2 1 6 6 H 1.08009 * 119.99823 * 239.99928 * 5 3 2 7 7 C 1.37875 * 120.00538 * 59.99712 * 5 3 2 8 8 N 1.31517 * 119.99547 * 359.97438 * 7 5 3 9 9 Si 1.86797 * 120.00465 * 180.02562 * 7 5 3 10 10 H 1.48500 * 109.47187 * 60.00188 * 9 7 5 11 11 H 1.48507 * 109.47154 * 180.02562 * 9 7 5 12 12 H 1.48503 * 109.47192 * 300.00129 * 9 7 5 13 13 N 1.46900 * 109.47551 * 297.96436 * 3 2 1 14 14 C 1.46895 * 111.00063 * 273.75793 * 13 3 2 15 15 C 1.50706 * 109.47003 * 174.74799 * 14 13 3 16 16 C 1.38172 * 120.01059 * 259.71807 * 15 14 13 17 17 C 1.38228 * 120.06521 * 179.76652 * 16 15 14 18 18 C 1.38408 * 120.09799 * 0.51136 * 17 16 15 19 19 Cl 1.73599 * 119.98476 * 179.76396 * 18 17 16 20 20 C 1.38240 * 120.02776 * 359.74714 * 18 17 16 21 21 C 1.38718 * 120.01586 * 79.99732 * 15 14 13 22 22 O 1.35895 * 120.05046 * 359.95516 * 21 15 14 23 23 C 1.42901 * 117.00045 * 180.02562 * 22 21 15 24 24 H 1.08996 * 109.47362 * 294.44762 * 1 2 3 25 25 H 1.09006 * 109.47046 * 174.44737 * 1 2 3 26 26 H 1.09002 * 109.46709 * 54.45169 * 1 2 3 27 27 H 1.08992 * 109.47092 * 119.99882 * 2 1 3 28 28 H 1.09007 * 109.47159 * 240.00403 * 2 1 3 29 29 H 0.97001 * 120.00175 * 179.97438 * 8 7 5 30 30 H 1.00897 * 110.99927 * 149.79680 * 13 3 2 31 31 H 1.09005 * 109.47061 * 294.74071 * 14 13 3 32 32 H 1.08997 * 109.47274 * 54.74586 * 14 13 3 33 33 H 1.07998 * 119.96858 * 0.02961 * 16 15 14 34 34 H 1.07998 * 119.94965 * 180.23271 * 17 16 15 35 35 H 1.08005 * 120.02985 * 180.02562 * 20 18 17 36 36 H 1.09002 * 109.47433 * 59.99497 * 23 22 21 37 37 H 1.08999 * 109.47321 * 180.02562 * 23 22 21 38 38 H 1.09006 * 109.46763 * 299.99764 * 23 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 1 3.1294 1.4427 0.0365 5 6 1.4969 2.1672 1.2045 6 1 0.8798 3.0440 1.0743 7 6 1.7878 1.7112 2.4727 8 7 2.5388 0.6432 2.6312 9 14 1.1140 2.6091 3.9657 10 1 -0.3701 2.6082 3.9158 11 1 1.5687 1.9239 5.2023 12 1 1.6085 4.0094 3.9659 13 7 1.5909 2.1207 -1.2232 14 6 2.5280 1.8857 -2.3298 15 6 1.9717 2.4859 -3.5953 16 6 1.3466 1.6787 -4.5263 17 6 0.8317 2.2287 -5.6852 18 6 0.9501 3.5874 -5.9208 19 17 0.3077 4.2741 -7.3801 20 6 1.5795 4.3979 -4.9945 21 6 2.0920 3.8480 -3.8286 22 8 2.7107 4.6426 -2.9161 23 6 2.7979 6.0358 -3.2222 24 1 -0.3634 0.4253 0.9355 25 1 -0.3633 -1.0229 -0.0994 26 1 -0.3633 0.5975 -0.8362 27 1 1.8933 -0.5138 0.8899 28 1 1.8934 -0.5138 -0.8901 29 1 2.7438 0.3225 3.5234 30 1 1.4616 3.1084 -1.0624 31 1 3.4869 2.3498 -2.0986 32 1 2.6670 0.8133 -2.4667 33 1 1.2565 0.6176 -4.3464 34 1 0.3401 1.5966 -6.4099 35 1 1.6715 5.4582 -5.1782 36 1 1.7945 6.4463 -3.3357 37 1 3.3136 6.5539 -2.4137 38 1 3.3524 6.1696 -4.1511 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000519421041.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 14:59:54 Heat of formation + Delta-G solvation = -27.225144 kcal Electronic energy + Delta-G solvation = -20121.853069 eV Core-core repulsion = 16990.162696 eV Total energy + Delta-G solvation = -3131.690372 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 283.108 amu Computer time = 0.49 seconds Orbital eigenvalues (eV) -40.25079 -37.62994 -36.63318 -35.95793 -33.09311 -31.26844 -30.31329 -29.69139 -27.41024 -26.40127 -24.23550 -23.05129 -22.28947 -21.18819 -18.95794 -18.11783 -16.55067 -16.43820 -15.74558 -15.58290 -14.85402 -14.70668 -14.14115 -13.92817 -13.63492 -13.55237 -13.13835 -12.91806 -12.24261 -12.17326 -11.92601 -11.79647 -11.58703 -11.31418 -11.02534 -11.01384 -10.86924 -10.75883 -10.64781 -10.33879 -10.04662 -9.68695 -9.33043 -8.82778 -8.72398 -8.43641 -8.10001 -7.16992 -5.98522 -4.03292 1.17336 1.37590 2.04130 3.29628 3.32602 3.37246 3.40023 3.65815 4.43352 4.74985 4.88047 5.02490 5.07920 5.12521 5.27924 5.32810 5.45714 5.61559 5.65879 5.71710 5.95021 6.12077 6.25127 6.32337 6.56043 6.59997 6.72759 6.76707 6.89859 7.27099 7.34270 7.36913 7.54467 7.78116 7.83431 7.88614 8.30524 8.43886 8.71614 9.05887 9.60986 11.07559 Molecular weight = 283.11amu Principal moments of inertia in cm(-1) A = 0.024037 B = 0.004099 C = 0.003761 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1164.569011 B = 6829.070587 C = 7443.333411 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.119 4.119 2 C -0.101 4.101 3 C 0.216 3.784 4 H 0.001 0.999 5 C -0.510 4.510 6 H 0.057 0.943 7 C 0.064 3.936 8 N -0.890 5.890 9 Si 0.892 3.108 10 H -0.277 1.277 11 H -0.288 1.288 12 H -0.279 1.279 13 N -0.678 5.678 14 C 0.103 3.897 15 C -0.086 4.086 16 C -0.056 4.056 17 C -0.148 4.148 18 C -0.004 4.004 19 Cl -0.080 7.080 20 C -0.205 4.205 21 C 0.144 3.856 22 O -0.302 6.302 23 C 0.026 3.974 24 H 0.051 0.949 25 H 0.012 0.988 26 H 0.047 0.953 27 H 0.085 0.915 28 H 0.009 0.991 29 H 0.260 0.740 30 H 0.334 0.666 31 H 0.034 0.966 32 H 0.073 0.927 33 H 0.139 0.861 34 H 0.131 0.869 35 H 0.134 0.866 36 H 0.055 0.945 37 H 0.101 0.899 38 H 0.052 0.948 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.671 6.401 -16.170 17.404 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.176 4.176 2 C -0.140 4.140 3 C 0.109 3.891 4 H 0.018 0.982 5 C -0.549 4.549 6 H 0.075 0.925 7 C -0.138 4.138 8 N -0.529 5.529 9 Si 0.720 3.280 10 H -0.202 1.202 11 H -0.214 1.214 12 H -0.204 1.204 13 N -0.309 5.309 14 C -0.026 4.026 15 C -0.087 4.087 16 C -0.075 4.075 17 C -0.167 4.167 18 C -0.031 4.031 19 Cl -0.051 7.051 20 C -0.224 4.224 21 C 0.098 3.902 22 O -0.215 6.215 23 C -0.069 4.069 24 H 0.070 0.930 25 H 0.031 0.969 26 H 0.066 0.934 27 H 0.103 0.897 28 H 0.028 0.972 29 H 0.070 0.930 30 H 0.151 0.849 31 H 0.052 0.948 32 H 0.091 0.909 33 H 0.157 0.843 34 H 0.149 0.851 35 H 0.152 0.848 36 H 0.074 0.926 37 H 0.120 0.880 38 H 0.071 0.929 Dipole moment (debyes) X Y Z Total from point charges -0.968 5.782 -16.121 17.154 hybrid contribution 0.238 1.363 0.773 1.585 sum -0.731 7.145 -15.348 16.945 Atomic orbital electron populations 1.21440 0.97538 0.97055 1.01603 1.21426 0.95064 0.98236 0.99244 1.19121 0.93331 0.91567 0.85103 0.98174 1.21138 1.31531 1.11869 0.90347 0.92452 1.24865 0.95125 0.95023 0.98768 1.69878 1.37469 1.23104 1.22409 0.86655 0.79440 0.79738 0.82121 1.20241 1.21378 1.20434 1.60751 1.46618 1.16612 1.06922 1.20719 0.93996 0.99418 0.88485 1.19602 1.00961 0.90079 0.98105 1.20877 0.94738 1.00227 0.91679 1.20916 1.03713 0.92863 0.99217 1.20528 1.00345 0.93410 0.88819 1.98351 1.85387 1.85247 1.36116 1.20973 1.05862 1.00495 0.95071 1.18742 0.92910 0.90613 0.87935 1.86201 1.72912 1.19331 1.43006 1.23083 1.01806 0.79603 1.02395 0.93006 0.96931 0.93412 0.89696 0.97193 0.92963 0.84876 0.94817 0.90890 0.84283 0.85089 0.84800 0.92597 0.88023 0.92898 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -2.68 9.46 37.16 0.35 -2.33 16 2 C -0.10 -2.43 5.58 -26.73 -0.15 -2.58 16 3 C 0.22 5.35 2.30 -68.87 -0.16 5.20 16 4 H 0.00 0.02 7.84 -51.93 -0.41 -0.39 16 5 C -0.51 -13.69 7.33 -34.44 -0.25 -13.94 16 6 H 0.06 1.54 7.60 -52.48 -0.40 1.14 16 7 C 0.06 1.74 5.30 -17.82 -0.09 1.64 16 8 N -0.89 -25.09 11.34 55.43 0.63 -24.46 16 9 Si 0.89 21.17 29.54 -169.99 -5.02 16.15 16 10 H -0.28 -6.54 7.11 56.52 0.40 -6.14 16 11 H -0.29 -6.81 7.11 56.52 0.40 -6.40 16 12 H -0.28 -6.55 7.11 56.52 0.40 -6.14 16 13 N -0.68 -14.33 5.50 -109.22 -0.60 -14.93 16 14 C 0.10 1.87 5.24 -4.98 -0.03 1.85 16 15 C -0.09 -1.35 5.45 -104.47 -0.57 -1.92 16 16 C -0.06 -0.77 9.66 -39.61 -0.38 -1.15 16 17 C -0.15 -1.83 9.83 -39.52 -0.39 -2.22 16 18 C 0.00 -0.05 6.32 -39.52 -0.25 -0.30 16 19 Cl -0.08 -0.88 28.95 -51.86 -1.50 -2.38 16 20 C -0.20 -2.63 8.82 -39.40 -0.35 -2.97 16 21 C 0.14 2.13 6.66 -39.22 -0.26 1.87 16 22 O -0.30 -4.47 9.69 -19.41 -0.19 -4.66 16 23 C 0.03 0.27 9.81 101.05 0.99 1.26 16 24 H 0.05 1.26 7.37 -51.93 -0.38 0.88 16 25 H 0.01 0.24 8.14 -51.93 -0.42 -0.18 16 26 H 0.05 1.04 7.50 -51.93 -0.39 0.65 16 27 H 0.08 2.27 6.12 -51.93 -0.32 1.95 16 28 H 0.01 0.21 7.43 -51.92 -0.39 -0.17 16 29 H 0.26 7.06 8.31 -40.82 -0.34 6.72 16 30 H 0.33 7.23 8.21 -39.29 -0.32 6.90 16 31 H 0.03 0.64 7.85 -51.93 -0.41 0.24 16 32 H 0.07 1.30 7.25 -51.93 -0.38 0.92 16 33 H 0.14 1.70 8.03 -52.49 -0.42 1.28 16 34 H 0.13 1.34 8.06 -52.49 -0.42 0.92 16 35 H 0.13 1.45 6.30 -52.48 -0.33 1.12 16 36 H 0.06 0.51 7.66 -51.93 -0.40 0.12 16 37 H 0.10 0.89 8.14 -51.93 -0.42 0.47 16 38 H 0.05 0.45 7.66 -51.93 -0.40 0.05 16 LS Contribution 327.59 15.07 4.94 4.94 Total: -1.00 -28.40 327.59 -8.62 -37.03 By element: Atomic # 1 Polarization: 9.26 SS G_CDS: -5.34 Total: 3.92 kcal Atomic # 6 Polarization: -14.06 SS G_CDS: -1.54 Total: -15.60 kcal Atomic # 7 Polarization: -39.42 SS G_CDS: 0.03 Total: -39.40 kcal Atomic # 8 Polarization: -4.47 SS G_CDS: -0.19 Total: -4.66 kcal Atomic # 14 Polarization: 21.17 SS G_CDS: -5.02 Total: 16.15 kcal Atomic # 17 Polarization: -0.88 SS G_CDS: -1.50 Total: -2.38 kcal Total LS contribution 4.94 Total: 4.94 kcal Total: -28.40 -8.62 -37.03 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000519421041.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 9.802 kcal (2) G-P(sol) polarization free energy of solvation -28.404 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -18.603 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.622 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.027 kcal (6) G-S(sol) free energy of system = (1) + (5) -27.225 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.49 seconds