Wall clock time and date at job start Fri Apr 10 2020 15:04:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17394 * 1 3 3 C 1.47204 * 179.97438 * 2 1 4 4 N 1.46505 * 109.46914 * 154.20910 * 3 2 1 5 5 C 1.36933 * 119.99651 * 267.89717 * 4 3 2 6 6 H 1.08005 * 119.99981 * 191.44673 * 5 4 3 7 7 C 1.38814 * 120.00317 * 11.43819 * 5 4 3 8 8 N 1.31619 * 119.99848 * 24.19847 * 7 5 4 9 9 Si 1.86796 * 120.00413 * 204.19173 * 7 5 4 10 10 H 1.48500 * 109.47127 * 0.02562 * 9 7 5 11 11 H 1.48500 * 109.47271 * 120.00232 * 9 7 5 12 12 H 1.48497 * 109.47343 * 240.00429 * 9 7 5 13 13 C 1.46497 * 120.00055 * 87.89393 * 4 3 2 14 14 C 1.50706 * 109.47081 * 269.99654 * 13 4 3 15 15 C 1.34685 * 126.59793 * 269.69204 * 14 13 4 16 16 Cl 1.73598 * 125.98440 * 359.96148 * 15 14 13 17 17 N 1.34233 * 108.03006 * 179.83920 * 15 14 13 18 18 C 1.30632 * 109.28318 * 0.43486 * 17 15 14 19 19 Cl 1.73601 * 125.65722 * 179.75548 * 18 17 15 20 20 N 1.35093 * 108.69591 * 359.73152 * 18 17 15 21 21 C 1.46496 * 126.40990 * 179.97438 * 20 18 17 22 22 H 4.40648 * 5.51407 * 180.02562 * 4 1 2 23 23 H 1.08993 * 109.47296 * 34.20993 * 3 2 1 24 24 H 1.08999 * 109.46934 * 274.20405 * 3 2 1 25 25 H 0.96998 * 120.00419 * 179.97438 * 8 7 5 26 26 H 1.08997 * 109.47527 * 30.00246 * 13 4 3 27 27 H 1.09001 * 109.46964 * 150.00665 * 13 4 3 28 28 H 1.09000 * 109.47207 * 270.02643 * 21 20 18 29 29 H 1.09004 * 109.47391 * 30.02299 * 21 20 18 30 30 H 1.08994 * 109.47442 * 150.02422 * 21 20 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1739 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 7 3.1337 1.2446 -0.6010 5 6 3.4029 1.2971 -1.9426 6 1 3.9323 2.1437 -2.3543 7 6 2.9955 0.2624 -2.7734 8 7 1.9837 -0.5032 -2.4232 9 14 3.8830 -0.0435 -4.3883 10 1 4.9772 0.9478 -4.5473 11 1 4.4539 -1.4144 -4.3875 12 1 2.9238 0.0925 -5.5138 13 6 3.3334 2.4321 0.2333 14 6 2.0629 3.2421 0.2664 15 6 1.7193 4.2316 -0.5802 16 17 2.6682 4.8076 -1.9149 17 7 0.5133 4.6927 -0.2128 18 6 0.1002 4.0323 0.8359 19 17 -1.4037 4.2874 1.6647 20 7 1.0369 3.1174 1.1682 21 6 0.9698 2.1698 2.2834 22 1 -1.0503 -0.0003 0.0004 23 1 3.0097 -0.8490 -0.5777 24 1 3.0093 -0.0745 1.0249 25 1 1.6987 -1.2260 -3.0039 26 1 3.5950 2.1250 1.2459 27 1 4.1391 3.0370 -0.1826 28 1 1.4079 2.6234 3.1725 29 1 -0.0713 1.9145 2.4812 30 1 1.5228 1.2664 2.0265 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000897162944.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 15:04:14 Heat of formation + Delta-G solvation = 142.109392 kcal Electronic energy + Delta-G solvation = -18821.027576 eV Core-core repulsion = 15707.559775 eV Total energy + Delta-G solvation = -3113.467801 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 287.029 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -41.73279 -36.80803 -36.28520 -35.91694 -33.70184 -31.90868 -31.62462 -29.26180 -26.74194 -26.28631 -25.48466 -22.01016 -21.18024 -19.70648 -17.61314 -17.12418 -16.56396 -15.80779 -15.08724 -14.80884 -14.30123 -13.75559 -13.64332 -13.46910 -13.16513 -12.75140 -12.35316 -11.98369 -11.57478 -11.55001 -11.39744 -11.13666 -10.85971 -10.79847 -10.61533 -10.26309 -10.01481 -9.69821 -9.24022 -9.03681 -8.93923 -8.53042 -7.74977 -7.23811 -5.88442 -3.25053 1.54472 2.18540 2.48088 3.21817 3.34355 3.44021 3.45444 3.46773 4.07268 4.22444 4.48094 4.93286 5.11616 5.26120 5.31250 5.48664 5.54789 5.61048 5.71131 6.00213 6.23717 6.47398 6.54847 6.61719 7.10088 7.16211 7.28705 7.72864 8.04992 8.11800 8.98111 9.07225 9.62947 10.04198 11.14595 Molecular weight = 287.03amu Principal moments of inertia in cm(-1) A = 0.018421 B = 0.007396 C = 0.006118 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1519.637255 B = 3785.067803 C = 4575.857004 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.295 4.295 2 C -0.097 4.097 3 C 0.262 3.738 4 N -0.568 5.568 5 C -0.258 4.258 6 H 0.086 0.914 7 C 0.006 3.994 8 N -0.886 5.886 9 Si 0.900 3.100 10 H -0.276 1.276 11 H -0.288 1.288 12 H -0.292 1.292 13 C 0.207 3.793 14 C 0.032 3.968 15 C 0.056 3.944 16 Cl -0.008 7.008 17 N -0.462 5.462 18 C 0.238 3.762 19 Cl 0.020 6.980 20 N -0.430 5.430 21 C 0.071 3.929 22 H 0.186 0.814 23 H 0.104 0.896 24 H 0.037 0.963 25 H 0.254 0.746 26 H 0.056 0.944 27 H 0.087 0.913 28 H 0.075 0.925 29 H 0.085 0.915 30 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.338 4.451 10.718 11.610 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.314 4.314 2 C -0.100 4.100 3 C 0.137 3.863 4 N -0.285 5.285 5 C -0.387 4.387 6 H 0.104 0.896 7 C -0.194 4.194 8 N -0.528 5.528 9 Si 0.729 3.271 10 H -0.201 1.201 11 H -0.215 1.215 12 H -0.219 1.219 13 C 0.078 3.922 14 C -0.088 4.088 15 C -0.099 4.099 16 Cl 0.020 6.980 17 N -0.186 5.186 18 C -0.048 4.048 19 Cl 0.048 6.952 20 N -0.117 5.117 21 C -0.071 4.071 22 H 0.203 0.797 23 H 0.122 0.878 24 H 0.055 0.945 25 H 0.065 0.935 26 H 0.074 0.926 27 H 0.105 0.895 28 H 0.094 0.906 29 H 0.104 0.896 30 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges -0.825 4.875 10.280 11.407 hybrid contribution -0.257 -0.734 -0.847 1.150 sum -1.082 4.141 9.433 10.359 Atomic orbital electron populations 1.24126 0.95255 1.04279 1.07776 1.24144 0.95099 0.96702 0.94013 1.18082 0.82909 0.90917 0.94366 1.44703 1.73512 1.04178 1.06097 1.19379 1.30306 1.06060 0.82937 0.89613 1.24866 0.96688 0.99779 0.98031 1.70148 1.23330 1.21371 1.37972 0.86255 0.79549 0.77877 0.83384 1.20058 1.21509 1.21914 1.19770 0.89098 0.87723 0.95654 1.22996 0.95302 0.98844 0.91696 1.20037 0.93294 1.00251 0.96327 1.98326 1.67703 1.88524 1.43473 1.69640 1.11141 1.27551 1.10299 1.22476 0.89783 0.95476 0.97090 1.98368 1.25530 1.95729 1.75592 1.44982 1.14610 1.27744 1.24391 1.22182 1.04717 0.93156 0.87070 0.79704 0.87823 0.94544 0.93509 0.92552 0.89525 0.90649 0.89581 0.88383 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 30. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.29 -6.31 18.89 29.55 0.56 -5.75 16 2 C -0.10 -2.12 9.32 -37.12 -0.35 -2.46 16 3 C 0.26 5.52 5.03 -6.82 -0.03 5.49 16 4 N -0.57 -12.42 2.47 -177.95 -0.44 -12.86 16 5 C -0.26 -6.41 9.69 -15.06 -0.15 -6.55 16 6 H 0.09 2.12 7.92 -52.48 -0.42 1.71 16 7 C 0.01 0.15 4.87 -17.43 -0.08 0.06 16 8 N -0.89 -23.98 9.28 55.49 0.51 -23.46 16 9 Si 0.90 20.96 29.62 -169.99 -5.03 15.93 16 10 H -0.28 -6.28 7.11 56.52 0.40 -5.88 16 11 H -0.29 -6.71 7.11 56.52 0.40 -6.31 16 12 H -0.29 -7.10 7.11 56.52 0.40 -6.69 16 13 C 0.21 3.78 5.65 -5.19 -0.03 3.75 16 14 C 0.03 0.62 6.40 -81.46 -0.52 0.10 16 15 C 0.06 1.17 7.70 -17.76 -0.14 1.03 16 16 Cl -0.01 -0.16 28.90 -51.86 -1.50 -1.66 16 17 N -0.46 -9.67 11.26 -8.89 -0.10 -9.77 16 18 C 0.24 4.35 8.51 -90.22 -0.77 3.58 16 19 Cl 0.02 0.30 28.77 -51.86 -1.49 -1.20 16 20 N -0.43 -7.42 3.16 -117.72 -0.37 -7.79 16 21 C 0.07 0.94 9.90 59.84 0.59 1.53 16 22 H 0.19 3.52 7.80 -54.08 -0.42 3.10 16 23 H 0.10 2.45 6.34 -51.93 -0.33 2.12 16 24 H 0.04 0.64 7.56 -51.93 -0.39 0.24 16 25 H 0.25 6.86 8.31 -40.82 -0.34 6.52 16 26 H 0.06 0.86 7.65 -51.93 -0.40 0.46 16 27 H 0.09 1.54 7.80 -51.93 -0.41 1.13 16 28 H 0.07 0.76 8.14 -51.93 -0.42 0.34 16 29 H 0.09 1.05 7.81 -51.93 -0.41 0.64 16 30 H 0.10 1.38 5.12 -51.93 -0.27 1.11 16 LS Contribution 295.19 15.07 4.45 4.45 Total: -1.00 -29.63 295.19 -7.48 -37.11 By element: Atomic # 1 Polarization: 1.08 SS G_CDS: -2.59 Total: -1.51 kcal Atomic # 6 Polarization: 1.68 SS G_CDS: -0.92 Total: 0.77 kcal Atomic # 7 Polarization: -53.49 SS G_CDS: -0.40 Total: -53.89 kcal Atomic # 14 Polarization: 20.96 SS G_CDS: -5.03 Total: 15.93 kcal Atomic # 17 Polarization: 0.13 SS G_CDS: -2.99 Total: -2.86 kcal Total LS contribution 4.45 Total: 4.45 kcal Total: -29.63 -7.48 -37.11 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000897162944.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 179.215 kcal (2) G-P(sol) polarization free energy of solvation -29.625 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 149.589 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.480 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.105 kcal (6) G-S(sol) free energy of system = (1) + (5) 142.109 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds