Wall clock time and date at job start Fri Apr 10 2020 15:02:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 N 1.30940 * 122.89222 * 2 1 4 4 C 1.29589 * 117.32263 * 180.02562 * 3 2 1 5 5 Cl 1.73596 * 124.81120 * 179.97438 * 4 3 2 6 6 S 1.70957 * 110.37572 * 359.75532 * 4 3 2 7 7 C 1.35662 * 122.89520 * 180.02562 * 2 1 3 8 8 C 1.46586 * 126.12096 * 359.94656 * 7 2 1 9 9 O 1.21701 * 119.99751 * 359.97438 * 8 7 2 10 10 N 1.34769 * 120.00255 * 179.97438 * 8 7 2 11 11 C 1.46500 * 120.00237 * 179.97438 * 10 8 7 12 12 C 1.53006 * 109.46998 * 180.02562 * 11 10 8 13 13 C 1.52999 * 109.46623 * 179.97438 * 12 11 10 14 14 C 1.50706 * 109.46953 * 179.97438 * 13 12 11 15 15 H 1.07999 * 119.99816 * 0.02562 * 14 13 12 16 16 C 1.37876 * 120.00344 * 180.02562 * 14 13 12 17 17 N 1.31514 * 119.99769 * 359.97438 * 16 14 13 18 18 Si 1.86800 * 120.00300 * 179.97438 * 16 14 13 19 19 H 1.48498 * 109.46691 * 0.02562 * 18 16 14 20 20 H 1.48500 * 109.46740 * 119.99592 * 18 16 14 21 21 H 1.48497 * 109.47025 * 239.99950 * 18 16 14 22 22 H 1.09005 * 109.47246 * 269.98024 * 1 2 3 23 23 H 1.09002 * 109.47161 * 29.98046 * 1 2 3 24 24 H 1.08996 * 109.46944 * 149.98107 * 1 2 3 25 25 H 0.97010 * 119.99854 * 0.02562 * 10 8 7 26 26 H 1.08993 * 109.47452 * 60.00368 * 11 10 8 27 27 H 1.09000 * 109.47175 * 300.00158 * 11 10 8 28 28 H 1.09000 * 109.47050 * 299.99945 * 12 11 10 29 29 H 1.09001 * 109.46801 * 60.00058 * 12 11 10 30 30 H 1.09000 * 109.47486 * 299.99829 * 13 12 11 31 31 H 1.09001 * 109.47362 * 60.00551 * 13 12 11 32 32 H 0.97000 * 120.00540 * 180.02562 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 7 2.2181 1.0995 0.0000 4 6 3.5079 0.9737 -0.0005 5 17 4.6326 2.2961 -0.0013 6 16 3.9448 -0.6791 0.0058 7 6 2.2438 -1.1391 -0.0005 8 6 1.7189 -2.5078 0.0000 9 8 0.5169 -2.6984 0.0014 10 7 2.5673 -3.5549 -0.0011 11 6 2.0427 -4.9227 -0.0001 12 6 3.2069 -5.9155 -0.0011 13 6 2.6589 -7.3440 0.0007 14 6 3.8056 -8.3219 -0.0009 15 1 4.8234 -7.9606 -0.0025 16 6 3.5555 -9.6778 -0.0003 17 7 2.3161 -10.1177 0.0022 18 14 4.9768 -10.8899 -0.0030 19 1 6.2619 -10.1457 -0.0050 20 1 4.9016 -11.7435 1.2098 21 1 4.8968 -11.7438 -1.2152 22 1 -0.3634 -0.0004 1.0277 23 1 -0.3633 0.8902 -0.5135 24 1 -0.3633 -0.8898 -0.5141 25 1 3.5254 -3.4029 -0.0019 26 1 1.4315 -5.0782 -0.8890 27 1 1.4341 -5.0778 0.8909 28 1 3.8158 -5.7606 -0.8918 29 1 3.8178 -5.7599 0.8882 30 1 2.0503 -7.4986 0.8916 31 1 2.0479 -7.4999 -0.8884 32 1 2.1400 -11.0716 0.0031 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000177824095.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 15:02:24 Heat of formation + Delta-G solvation = -14.541335 kcal Electronic energy + Delta-G solvation = -17274.785415 eV Core-core repulsion = 14194.682868 eV Total energy + Delta-G solvation = -3080.102547 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 288.044 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -40.68687 -39.23890 -37.45961 -35.60151 -33.44594 -32.11691 -31.36295 -28.84990 -26.60504 -25.27217 -23.49271 -21.63785 -20.82916 -19.58976 -18.84338 -17.23405 -16.41750 -16.23974 -16.02491 -15.17711 -15.13791 -14.48015 -14.12545 -13.97426 -13.92088 -13.20691 -12.76399 -12.35417 -12.08068 -12.00300 -11.91101 -11.82221 -11.71882 -10.96351 -10.82509 -10.61675 -10.42193 -10.08441 -9.98692 -9.95318 -9.49225 -9.21764 -9.16407 -8.94293 -8.41762 -6.06136 -4.09421 -0.29864 0.17750 0.99465 1.33433 1.97820 2.97189 3.08271 3.27306 3.35125 3.38397 3.95791 4.40784 4.55133 4.73835 5.29355 5.29973 5.47630 5.56979 5.60085 5.66384 6.03664 6.04813 6.28367 6.49446 6.68842 6.90531 6.98944 7.40962 7.58193 7.69589 7.92057 8.04653 8.32967 8.97334 9.55219 11.05165 Molecular weight = 288.04amu Principal moments of inertia in cm(-1) A = 0.028735 B = 0.002869 C = 0.002616 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 974.195551 B = 9756.904009 C =10700.043837 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.090 4.090 2 C 0.156 3.844 3 N -0.464 5.464 4 C 0.077 3.923 5 Cl 0.035 6.965 6 S 0.238 5.762 7 C -0.289 4.289 8 C 0.591 3.409 9 O -0.518 6.518 10 N -0.717 5.717 11 C 0.116 3.884 12 C -0.122 4.122 13 C 0.024 3.976 14 C -0.523 4.523 15 H 0.056 0.944 16 C 0.057 3.943 17 N -0.893 5.893 18 Si 0.893 3.107 19 H -0.273 1.273 20 H -0.284 1.284 21 H -0.284 1.284 22 H 0.085 0.915 23 H 0.076 0.924 24 H 0.105 0.895 25 H 0.395 0.605 26 H 0.070 0.930 27 H 0.070 0.930 28 H 0.056 0.944 29 H 0.055 0.945 30 H 0.020 0.980 31 H 0.020 0.980 32 H 0.261 0.739 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.290 23.464 -0.029 23.693 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C 0.018 3.982 3 N -0.181 5.181 4 C -0.224 4.224 5 Cl 0.063 6.937 6 S 0.491 5.509 7 C -0.413 4.413 8 C 0.375 3.625 9 O -0.397 6.397 10 N -0.367 5.367 11 C -0.006 4.006 12 C -0.160 4.160 13 C -0.014 4.014 14 C -0.561 4.561 15 H 0.074 0.926 16 C -0.144 4.144 17 N -0.532 5.532 18 Si 0.721 3.279 19 H -0.197 1.197 20 H -0.210 1.210 21 H -0.210 1.210 22 H 0.103 0.897 23 H 0.095 0.905 24 H 0.124 0.876 25 H 0.229 0.771 26 H 0.088 0.912 27 H 0.088 0.912 28 H 0.074 0.926 29 H 0.074 0.926 30 H 0.038 0.962 31 H 0.038 0.962 32 H 0.071 0.929 Dipole moment (debyes) X Y Z Total from point charges 3.231 23.286 -0.021 23.509 hybrid contribution 0.596 -0.327 0.020 0.680 sum 3.827 22.959 -0.001 23.276 Atomic orbital electron populations 1.20729 0.85057 1.04916 1.04166 1.20506 0.98722 0.83977 0.94988 1.65798 1.03346 1.32317 1.16659 1.27334 0.93087 0.95189 1.06769 1.98451 1.54458 1.44455 1.96341 1.84076 1.04715 0.97177 1.64976 1.25842 0.95891 0.99924 1.19687 1.16577 0.86426 0.82091 0.77385 1.90810 1.14036 1.84683 1.50150 1.46156 1.09336 1.07081 1.74171 1.21776 0.98255 0.77978 1.02554 1.21923 0.95911 0.97147 1.01059 1.19033 0.96621 0.87951 0.97754 1.21228 0.92893 0.91031 1.50974 0.92562 1.25029 0.95594 0.98606 0.95221 1.69969 1.18502 1.14219 1.50538 0.86525 0.82565 0.81211 0.77635 1.19733 1.20982 1.20975 0.89673 0.90485 0.87613 0.77058 0.91155 0.91162 0.92574 0.92581 0.96179 0.96180 0.92932 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.96 9.69 36.01 0.35 -0.61 16 2 C 0.16 1.88 6.79 -83.89 -0.57 1.31 16 3 N -0.46 -5.54 10.51 -8.63 -0.09 -5.63 16 4 C 0.08 0.79 8.03 51.82 0.42 1.20 16 5 Cl 0.04 0.29 29.33 -51.86 -1.52 -1.23 16 6 S 0.24 2.17 22.35 -107.50 -2.40 -0.23 16 7 C -0.29 -3.49 6.48 -37.14 -0.24 -3.73 16 8 C 0.59 8.46 7.77 -12.90 -0.10 8.36 16 9 O -0.52 -8.78 14.26 5.19 0.07 -8.71 16 10 N -0.72 -9.83 5.55 -61.65 -0.34 -10.17 16 11 C 0.12 1.91 5.67 -4.04 -0.02 1.89 16 12 C -0.12 -2.27 5.27 -26.73 -0.14 -2.41 16 13 C 0.02 0.59 4.97 -27.88 -0.14 0.45 16 14 C -0.52 -14.25 9.11 -34.44 -0.31 -14.56 16 15 H 0.06 1.48 7.74 -52.49 -0.41 1.07 16 16 C 0.06 1.60 5.46 -17.82 -0.10 1.50 16 17 N -0.89 -26.34 13.29 55.43 0.74 -25.60 16 18 Si 0.89 21.10 29.54 -169.99 -5.02 16.08 16 19 H -0.27 -6.27 7.11 56.52 0.40 -5.87 16 20 H -0.28 -6.66 7.11 56.52 0.40 -6.26 16 21 H -0.28 -6.66 7.11 56.52 0.40 -6.26 16 22 H 0.08 0.85 8.14 -51.93 -0.42 0.42 16 23 H 0.08 0.71 8.14 -51.93 -0.42 0.28 16 24 H 0.11 1.27 6.01 -51.93 -0.31 0.96 16 25 H 0.40 4.48 7.65 -40.82 -0.31 4.16 16 26 H 0.07 1.21 8.14 -51.93 -0.42 0.79 16 27 H 0.07 1.21 8.14 -51.93 -0.42 0.79 16 28 H 0.06 1.00 8.14 -51.93 -0.42 0.58 16 29 H 0.06 1.00 8.14 -51.93 -0.42 0.57 16 30 H 0.02 0.52 8.14 -51.93 -0.42 0.10 16 31 H 0.02 0.52 8.14 -51.93 -0.42 0.10 16 32 H 0.26 7.25 8.31 -40.82 -0.34 6.91 16 LS Contribution 310.24 15.07 4.68 4.68 Total: -1.00 -30.77 310.24 -8.30 -39.07 By element: Atomic # 1 Polarization: 1.89 SS G_CDS: -3.55 Total: -1.65 kcal Atomic # 6 Polarization: -5.75 SS G_CDS: -0.86 Total: -6.60 kcal Atomic # 7 Polarization: -41.71 SS G_CDS: 0.30 Total: -41.40 kcal Atomic # 8 Polarization: -8.78 SS G_CDS: 0.07 Total: -8.71 kcal Atomic # 14 Polarization: 21.10 SS G_CDS: -5.02 Total: 16.08 kcal Atomic # 16 Polarization: 2.17 SS G_CDS: -2.40 Total: -0.23 kcal Atomic # 17 Polarization: 0.29 SS G_CDS: -1.52 Total: -1.23 kcal Total LS contribution 4.68 Total: 4.68 kcal Total: -30.77 -8.30 -39.07 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000177824095.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 24.527 kcal (2) G-P(sol) polarization free energy of solvation -30.770 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -6.244 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.298 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.068 kcal (6) G-S(sol) free energy of system = (1) + (5) -14.541 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds