Wall clock time and date at job start Fri Apr 10 2020 15:49:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13603 * 1 3 3 C 1.47199 * 179.97438 * 2 1 4 4 F 1.39897 * 110.65505 * 223.53984 * 3 2 1 5 5 C 1.54622 * 110.73869 * 100.35149 * 3 2 1 6 6 C 1.54008 * 105.04379 * 263.32708 * 5 3 2 7 7 N 1.47484 * 107.24628 * 1.20994 * 6 5 3 8 8 C 1.34778 * 127.03329 * 154.61321 * 7 6 5 9 9 O 1.21274 * 120.00268 * 180.02562 * 8 7 6 10 10 C 1.50701 * 119.99785 * 0.02562 * 8 7 6 11 11 C 1.53005 * 109.47081 * 180.02562 * 10 8 7 12 12 H 1.08999 * 109.46887 * 54.99801 * 11 10 8 13 13 C 1.50697 * 109.46877 * 295.00023 * 11 10 8 14 14 H 1.08000 * 120.00147 * 325.13136 * 13 11 10 15 15 C 1.37875 * 119.99828 * 145.12638 * 13 11 10 16 16 N 1.31516 * 120.00239 * 184.98774 * 15 13 11 17 17 Si 1.86803 * 120.00163 * 4.98883 * 15 13 11 18 18 H 1.48493 * 109.46911 * 84.72813 * 17 15 13 19 19 H 1.48503 * 109.47201 * 204.73077 * 17 15 13 20 20 H 1.48500 * 109.47029 * 324.72886 * 17 15 13 21 21 C 1.50695 * 109.47038 * 175.00177 * 11 10 8 22 22 C 1.38232 * 120.00355 * 64.68948 * 21 11 10 23 23 C 1.38233 * 120.00176 * 179.74005 * 22 21 11 24 24 C 1.38228 * 120.00022 * 0.55506 * 23 22 21 25 25 C 1.38238 * 120.00141 * 359.70420 * 24 23 22 26 26 C 1.38233 * 119.99590 * 0.02562 * 25 24 23 27 27 C 1.48385 * 105.79579 * 334.78238 * 7 6 5 28 28 H 1.09000 * 110.32775 * 144.43719 * 5 3 2 29 29 H 1.08998 * 110.41101 * 22.26616 * 5 3 2 30 30 H 1.08998 * 109.90757 * 120.66612 * 6 5 3 31 31 H 1.08993 * 109.91101 * 241.75361 * 6 5 3 32 32 H 1.09005 * 109.47302 * 299.99653 * 10 8 7 33 33 H 1.09002 * 109.47067 * 60.00076 * 10 8 7 34 34 H 0.97001 * 120.00643 * 180.02562 * 16 15 13 35 35 H 1.08008 * 119.99882 * 0.02562 * 22 21 11 36 36 H 1.08005 * 119.99926 * 180.27735 * 23 22 21 37 37 H 1.07997 * 120.00290 * 179.71778 * 24 23 22 38 38 H 1.07994 * 120.00478 * 180.02562 * 25 24 23 39 39 H 1.08005 * 120.00252 * 179.97438 * 26 25 24 40 40 H 1.08994 * 110.52047 * 280.62747 * 27 7 6 41 41 H 1.09001 * 110.83632 * 157.65293 * 27 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 9 3.1011 0.9498 0.9017 5 6 3.1554 0.2607 -1.4225 6 6 3.4592 -1.1361 -1.9955 7 7 3.0763 -2.1228 -0.9684 8 6 2.7193 -3.4068 -1.1694 9 8 2.4265 -4.1097 -0.2255 10 6 2.6841 -3.9691 -2.5671 11 6 2.2499 -5.4354 -2.5162 12 1 1.2976 -5.5142 -1.9918 13 6 3.2929 -6.2431 -1.7877 14 1 4.3380 -5.9888 -1.8850 15 6 2.9129 -7.3066 -0.9969 16 7 3.8115 -7.9502 -0.2841 17 14 1.1217 -7.8336 -0.9377 18 1 0.8380 -8.7509 -2.0704 19 1 0.8535 -8.5327 0.3447 20 1 0.2498 -6.6359 -1.0403 21 6 2.0959 -5.9626 -3.9195 22 6 3.1984 -6.0549 -4.7481 23 6 3.0581 -6.5436 -6.0335 24 6 1.8132 -6.9293 -6.4942 25 6 0.7096 -6.8321 -5.6674 26 6 0.8510 -6.3487 -4.3801 27 6 3.1614 -1.4086 0.3295 28 1 4.0668 0.8567 -1.3744 29 1 2.4057 0.7652 -2.0320 30 1 2.8776 -1.2997 -2.9027 31 1 4.5231 -1.2236 -2.2159 32 1 1.9748 -3.4013 -3.1694 33 1 3.6766 -3.8990 -3.0121 34 1 3.5443 -8.6987 0.2720 35 1 4.1704 -5.7494 -4.3897 36 1 3.9203 -6.6198 -6.6794 37 1 1.7027 -7.3069 -7.5000 38 1 -0.2629 -7.1339 -6.0271 39 1 -0.0113 -6.2723 -3.7341 40 1 4.1967 -1.3466 0.6643 41 1 2.5436 -1.8979 1.0825 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000619445310.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 15:49:06 Heat of formation + Delta-G solvation = -15.800937 kcal Electronic energy + Delta-G solvation = -26078.135350 eV Core-core repulsion = 22258.955712 eV Total energy + Delta-G solvation = -3819.179638 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 316.133 amu Computer time = 0.52 seconds Orbital eigenvalues (eV) -48.36963 -39.82845 -38.65881 -37.48960 -36.21221 -34.16048 -31.83644 -31.39287 -30.25713 -29.70456 -28.75220 -26.23616 -24.30632 -22.65692 -22.54691 -21.88207 -20.00698 -18.98107 -18.76279 -17.08728 -17.02866 -16.31021 -15.99528 -15.31439 -15.22686 -15.11644 -14.50026 -14.47194 -14.20785 -14.05760 -13.80968 -13.53394 -13.19178 -12.96853 -12.83945 -12.80760 -12.69469 -12.50034 -12.27567 -11.93609 -11.89023 -11.85797 -11.53826 -11.22835 -11.21605 -10.82312 -10.55081 -10.42569 -9.92436 -9.65052 -9.21433 -9.10248 -8.61301 -8.46912 -8.27491 -7.87163 -6.02063 -3.99391 2.03868 2.09059 2.24113 2.26019 2.89805 3.14278 3.23053 3.39245 3.43602 3.45058 3.84036 3.93537 4.18711 4.46903 4.52942 4.71393 5.02447 5.06149 5.23465 5.30952 5.42383 5.47392 5.47907 5.50462 5.59277 5.60169 5.63761 5.85138 5.94018 5.99534 6.18481 6.21916 6.26973 6.53565 6.63940 6.77817 6.97383 7.04771 7.09252 7.20583 7.52656 7.67180 7.74126 7.77561 8.48284 8.75675 8.96381 9.62343 11.10906 Molecular weight = 316.13amu Principal moments of inertia in cm(-1) A = 0.013621 B = 0.004300 C = 0.003780 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2055.190603 B = 6510.538810 C = 7404.912786 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.384 5.384 2 C 0.190 3.810 3 C 0.211 3.789 4 F -0.170 7.170 5 C -0.144 4.144 6 C 0.103 3.897 7 N -0.638 5.638 8 C 0.538 3.462 9 O -0.486 6.486 10 C -0.108 4.108 11 C 0.045 3.955 12 H 0.058 0.942 13 C -0.488 4.488 14 H 0.072 0.928 15 C 0.088 3.912 16 N -0.896 5.896 17 Si 0.868 3.132 18 H -0.276 1.276 19 H -0.291 1.291 20 H -0.262 1.262 21 C -0.040 4.040 22 C -0.101 4.101 23 C -0.126 4.126 24 C -0.149 4.149 25 C -0.124 4.124 26 C -0.140 4.140 27 C 0.099 3.901 28 H 0.112 0.888 29 H 0.094 0.906 30 H 0.084 0.916 31 H 0.081 0.919 32 H 0.069 0.931 33 H 0.087 0.913 34 H 0.262 0.738 35 H 0.121 0.879 36 H 0.111 0.889 37 H 0.108 0.892 38 H 0.109 0.891 39 H 0.109 0.891 40 H 0.104 0.896 41 H 0.101 0.899 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.834 15.685 -7.182 17.271 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.058 5.058 2 C -0.130 4.130 3 C 0.187 3.813 4 F -0.150 7.150 5 C -0.183 4.183 6 C -0.021 4.021 7 N -0.378 5.378 8 C 0.328 3.672 9 O -0.355 6.355 10 C -0.148 4.148 11 C 0.025 3.975 12 H 0.076 0.924 13 C -0.525 4.525 14 H 0.091 0.909 15 C -0.115 4.115 16 N -0.533 5.533 17 Si 0.697 3.303 18 H -0.201 1.201 19 H -0.217 1.217 20 H -0.187 1.187 21 C -0.041 4.041 22 C -0.119 4.119 23 C -0.144 4.144 24 C -0.167 4.167 25 C -0.142 4.142 26 C -0.159 4.159 27 C -0.027 4.027 28 H 0.130 0.870 29 H 0.113 0.887 30 H 0.103 0.897 31 H 0.099 0.901 32 H 0.087 0.913 33 H 0.106 0.894 34 H 0.072 0.928 35 H 0.139 0.861 36 H 0.129 0.871 37 H 0.126 0.874 38 H 0.127 0.873 39 H 0.127 0.873 40 H 0.122 0.878 41 H 0.120 0.880 Dipole moment (debyes) X Y Z Total from point charges -1.047 14.982 -6.502 16.366 hybrid contribution -0.446 -0.325 0.216 0.592 sum -1.493 14.657 -6.287 16.018 Atomic orbital electron populations 1.81212 1.12279 1.06213 1.06137 1.28846 0.94664 0.94674 0.94839 1.18889 0.81272 0.90195 0.90898 1.92984 1.87492 1.65484 1.69047 1.23183 1.03718 0.99189 0.92242 1.22041 1.01707 0.85733 0.92636 1.49041 1.71467 1.11004 1.06314 1.20685 0.75612 0.78065 0.92874 1.90786 1.45062 1.55777 1.43885 1.21644 1.02682 0.98840 0.91640 1.18331 0.99826 0.90096 0.89220 0.92445 1.20576 0.92982 1.12890 1.26055 0.90948 1.24854 0.96644 0.95909 0.94057 1.69874 1.33812 1.21716 1.27935 0.86998 0.87048 0.78933 0.77350 1.20144 1.21721 1.18711 1.20755 0.91858 0.95217 0.96222 1.20967 0.98825 0.99375 0.92760 1.21066 0.96759 1.00150 0.96414 1.20872 0.93295 1.03290 0.99272 1.20965 0.98078 1.00640 0.94509 1.21088 0.97384 1.01758 0.95627 1.22800 1.03026 0.87231 0.89613 0.87001 0.88738 0.89743 0.90100 0.91259 0.89438 0.92773 0.86146 0.87107 0.87363 0.87322 0.87333 0.87793 0.88046 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.38 -5.74 18.54 42.15 0.78 -4.96 16 2 C 0.19 2.35 14.30 -20.76 -0.30 2.06 16 3 C 0.21 1.97 1.63 -91.53 -0.15 1.82 16 4 F -0.17 -1.56 16.93 2.25 0.04 -1.52 16 5 C -0.14 -0.91 6.30 -25.35 -0.16 -1.07 16 6 C 0.10 0.85 6.74 -2.98 -0.02 0.83 16 7 N -0.64 -8.55 3.26 -169.55 -0.55 -9.10 16 8 C 0.54 10.04 7.64 -10.98 -0.08 9.95 16 9 O -0.49 -11.63 15.21 5.56 0.08 -11.55 16 10 C -0.11 -1.90 4.04 -27.88 -0.11 -2.02 16 11 C 0.04 0.99 1.21 -92.93 -0.11 0.88 16 12 H 0.06 1.40 4.70 -51.93 -0.24 1.15 16 13 C -0.49 -13.04 6.87 -34.44 -0.24 -13.27 16 14 H 0.07 2.07 8.06 -52.49 -0.42 1.65 16 15 C 0.09 2.56 5.47 -17.82 -0.10 2.46 16 16 N -0.90 -27.60 13.96 55.43 0.77 -26.83 16 17 Si 0.87 22.62 27.15 -169.99 -4.62 18.01 16 18 H -0.28 -7.04 7.11 56.52 0.40 -6.64 16 19 H -0.29 -7.66 7.11 56.52 0.40 -7.25 16 20 H -0.26 -6.63 6.06 56.52 0.34 -6.28 16 21 C -0.04 -0.81 4.55 -104.63 -0.48 -1.28 16 22 C -0.10 -1.88 8.87 -39.59 -0.35 -2.23 16 23 C -0.13 -2.05 10.05 -39.59 -0.40 -2.45 16 24 C -0.15 -2.35 10.05 -39.58 -0.40 -2.75 16 25 C -0.12 -2.07 10.05 -39.58 -0.40 -2.47 16 26 C -0.14 -2.69 9.43 -39.58 -0.37 -3.07 16 27 C 0.10 1.12 6.32 -1.98 -0.01 1.11 16 28 H 0.11 0.44 8.12 -51.93 -0.42 0.01 16 29 H 0.09 0.51 7.85 -51.93 -0.41 0.10 16 30 H 0.08 0.64 7.54 -51.93 -0.39 0.25 16 31 H 0.08 0.55 8.14 -51.93 -0.42 0.12 16 32 H 0.07 1.03 7.91 -51.93 -0.41 0.62 16 33 H 0.09 1.40 7.86 -51.93 -0.41 0.99 16 34 H 0.26 7.72 8.31 -40.82 -0.34 7.38 16 35 H 0.12 2.18 7.80 -52.48 -0.41 1.77 16 36 H 0.11 1.50 8.06 -52.48 -0.42 1.08 16 37 H 0.11 1.40 8.06 -52.49 -0.42 0.97 16 38 H 0.11 1.54 8.06 -52.49 -0.42 1.11 16 39 H 0.11 2.04 7.95 -52.48 -0.42 1.63 16 40 H 0.10 0.98 8.14 -51.93 -0.42 0.56 16 41 H 0.10 1.35 7.77 -51.93 -0.40 0.95 16 LS Contribution 353.15 15.07 5.32 5.32 Total: -1.00 -34.85 353.15 -7.09 -41.94 By element: Atomic # 1 Polarization: 5.43 SS G_CDS: -5.24 Total: 0.18 kcal Atomic # 6 Polarization: -7.82 SS G_CDS: -3.67 Total: -11.50 kcal Atomic # 7 Polarization: -41.89 SS G_CDS: 1.00 Total: -40.88 kcal Atomic # 8 Polarization: -11.63 SS G_CDS: 0.08 Total: -11.55 kcal Atomic # 9 Polarization: -1.56 SS G_CDS: 0.04 Total: -1.52 kcal Atomic # 14 Polarization: 22.62 SS G_CDS: -4.62 Total: 18.01 kcal Total LS contribution 5.32 Total: 5.32 kcal Total: -34.85 -7.09 -41.94 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000619445310.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 26.140 kcal (2) G-P(sol) polarization free energy of solvation -34.853 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -8.714 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.087 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.941 kcal (6) G-S(sol) free energy of system = (1) + (5) -15.801 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.52 seconds