Wall clock time and date at job start Fri Apr 10 2020 17:31:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45200 * 1 3 3 C 1.34231 * 117.00172 * 2 1 4 4 O 1.20829 * 119.99932 * 0.02562 * 3 2 1 5 5 C 1.50694 * 120.00104 * 179.97438 * 3 2 1 6 6 N 1.46501 * 109.47336 * 180.02562 * 5 3 2 7 7 C 1.36933 * 119.99956 * 96.09917 * 6 5 3 8 8 H 1.08002 * 120.00332 * 163.10839 * 7 6 5 9 9 C 1.38810 * 119.99739 * 342.83240 * 7 6 5 10 10 N 1.31615 * 120.00289 * 336.50878 * 9 7 6 11 11 Si 1.86805 * 120.00028 * 156.50342 * 9 7 6 12 12 H 1.48500 * 109.46858 * 59.99947 * 11 9 7 13 13 H 1.48500 * 109.47335 * 180.02562 * 11 9 7 14 14 H 1.48500 * 109.47037 * 300.00293 * 11 9 7 15 15 C 1.46504 * 120.00032 * 276.10261 * 6 5 3 16 16 C 1.50706 * 109.47027 * 269.99713 * 15 6 5 17 17 C 1.38340 * 119.98147 * 94.72364 * 16 15 6 18 18 N 1.32151 * 120.01817 * 179.75623 * 17 16 15 19 19 C 1.32252 * 119.97808 * 0.51893 * 18 17 16 20 20 Cl 1.73605 * 120.01240 * 179.75715 * 19 18 17 21 21 C 1.38518 * 119.96831 * 359.73557 * 19 18 17 22 22 N 1.32112 * 119.98229 * 0.02562 * 21 19 18 23 23 H 1.08995 * 109.47425 * 179.97438 * 1 2 3 24 24 H 1.08998 * 109.46957 * 299.99651 * 1 2 3 25 25 H 1.09004 * 109.47089 * 59.99650 * 1 2 3 26 26 H 1.09003 * 109.46918 * 60.00832 * 5 3 2 27 27 H 1.08993 * 109.47612 * 300.00954 * 5 3 2 28 28 H 0.97008 * 120.00243 * 180.02562 * 10 9 7 29 29 H 1.09001 * 109.47248 * 29.99791 * 15 6 5 30 30 H 1.09000 * 109.46965 * 149.99807 * 15 6 5 31 31 H 1.07999 * 119.99675 * 0.02562 * 17 16 15 32 32 H 1.08000 * 120.00935 * 179.97438 * 21 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2094 0.0005 5 6 3.5663 1.2748 0.0006 6 7 3.9818 2.6797 0.0011 7 6 4.2963 3.3002 1.1805 8 1 4.8539 4.2252 1.1722 9 6 3.8936 2.7434 2.3866 10 7 2.8625 1.9262 2.4225 11 14 4.8151 3.1539 3.9588 12 1 4.7533 4.6177 4.2010 13 1 4.1919 2.4361 5.0997 14 1 6.2332 2.7338 3.8254 15 6 4.0606 3.4207 -1.2603 16 6 5.4426 3.2742 -1.8434 17 6 5.6962 2.2897 -2.7816 18 7 6.9066 2.1637 -3.2969 19 6 7.8779 2.9726 -2.9079 20 17 9.4698 2.8037 -3.5797 21 6 7.6244 3.9547 -1.9645 22 7 6.4128 4.0824 -1.4537 23 1 -0.3634 -1.0276 -0.0005 24 1 -0.3633 0.5138 0.8900 25 1 -0.3633 0.5139 -0.8900 26 1 3.9564 0.7806 -0.8893 27 1 3.9557 0.7808 0.8907 28 1 2.5808 1.5374 3.2654 29 1 3.3265 3.0238 -1.9614 30 1 3.8539 4.4749 -1.0758 31 1 4.9039 1.6267 -3.0962 32 1 8.4173 4.6153 -1.6461 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000788483939.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 17:31:13 Heat of formation + Delta-G solvation = -11.676459 kcal Electronic energy + Delta-G solvation = -20295.963477 eV Core-core repulsion = 16898.262430 eV Total energy + Delta-G solvation = -3397.701047 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 285.067 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -40.89998 -39.06752 -36.83823 -36.17454 -34.78165 -34.03219 -32.33170 -30.64026 -28.37561 -26.63545 -26.02756 -24.55728 -23.32935 -21.49445 -19.82976 -17.70132 -17.21008 -16.93792 -16.42656 -15.91348 -15.47619 -15.14953 -15.06779 -14.63241 -13.92524 -13.70786 -13.43225 -12.90419 -12.40935 -12.25021 -11.96807 -11.61592 -11.50920 -11.37693 -11.21986 -11.08590 -10.92846 -10.85755 -10.59195 -10.21497 -10.07832 -9.72433 -9.39345 -8.97853 -8.88682 -8.61134 -7.23530 -6.01681 -3.35897 0.80968 1.22756 1.73069 3.33469 3.39627 3.41298 3.66602 3.75718 3.94631 4.33531 4.41163 4.42133 4.53277 5.12375 5.21561 5.30540 5.38992 5.49908 5.72780 5.78282 6.00463 6.06199 6.13574 6.31664 6.45401 6.58413 6.84488 7.27961 7.59470 7.71280 7.89757 8.04693 8.90798 9.24163 9.57088 9.97665 11.09196 Molecular weight = 285.07amu Principal moments of inertia in cm(-1) A = 0.016284 B = 0.005485 C = 0.004413 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1719.104734 B = 5103.340153 C = 6343.736085 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.043 3.957 2 O -0.382 6.382 3 C 0.464 3.536 4 O -0.501 6.501 5 C 0.186 3.814 6 N -0.552 5.552 7 C -0.261 4.261 8 H 0.087 0.913 9 C 0.006 3.994 10 N -0.899 5.899 11 Si 0.910 3.090 12 H -0.281 1.281 13 H -0.291 1.291 14 H -0.283 1.283 15 C 0.191 3.809 16 C 0.092 3.908 17 C 0.069 3.931 18 N -0.436 5.436 19 C 0.102 3.898 20 Cl -0.033 7.033 21 C 0.076 3.924 22 N -0.404 5.404 23 H 0.081 0.919 24 H 0.054 0.946 25 H 0.046 0.954 26 H 0.053 0.947 27 H 0.113 0.887 28 H 0.259 0.741 29 H 0.067 0.933 30 H 0.080 0.920 31 H 0.173 0.827 32 H 0.172 0.828 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.958 -1.467 -9.527 10.839 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.052 4.052 2 O -0.300 6.300 3 C 0.304 3.696 4 O -0.386 6.386 5 C 0.056 3.944 6 N -0.270 5.270 7 C -0.389 4.389 8 H 0.104 0.896 9 C -0.193 4.193 10 N -0.542 5.542 11 Si 0.739 3.261 12 H -0.207 1.207 13 H -0.217 1.217 14 H -0.209 1.209 15 C 0.062 3.938 16 C -0.051 4.051 17 C -0.092 4.092 18 N -0.153 5.153 19 C -0.066 4.066 20 Cl -0.005 7.005 21 C -0.085 4.085 22 N -0.119 5.119 23 H 0.100 0.900 24 H 0.073 0.927 25 H 0.065 0.935 26 H 0.071 0.929 27 H 0.131 0.869 28 H 0.069 0.931 29 H 0.085 0.915 30 H 0.098 0.902 31 H 0.190 0.810 32 H 0.189 0.811 Dipole moment (debyes) X Y Z Total from point charges 4.769 -1.224 -9.393 10.605 hybrid contribution 0.282 0.085 0.966 1.010 sum 5.051 -1.138 -8.427 9.891 Atomic orbital electron populations 1.22878 0.79516 1.01461 1.01381 1.86531 1.21191 1.36527 1.85713 1.25353 0.93364 0.80318 0.70603 1.90482 1.66605 1.36391 1.45073 1.20286 0.85812 0.86492 1.01766 1.43867 1.74256 1.06965 1.01888 1.19300 1.29024 1.08375 0.82207 0.89563 1.24863 0.96283 1.00022 0.98087 1.69891 1.22811 1.35286 1.26239 0.86244 0.79593 0.78045 0.82220 1.20721 1.21672 1.20947 1.19739 0.86259 0.99131 0.88696 1.24066 0.99586 0.90395 0.91089 1.23618 0.93174 0.97706 0.94743 1.67693 1.00208 1.23107 1.24244 1.22733 0.89606 0.96596 0.97617 1.98389 1.19684 1.97340 1.85103 1.23657 0.96093 0.96049 0.92719 1.68595 0.98917 1.24019 1.20355 0.90030 0.92741 0.93501 0.92922 0.86902 0.93099 0.91517 0.90157 0.80960 0.81133 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 35. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.71 10.56 101.05 1.07 1.78 16 2 O -0.38 -7.83 10.57 -39.26 -0.41 -8.25 16 3 C 0.46 10.62 6.17 36.00 0.22 10.85 16 4 O -0.50 -12.96 15.80 -18.75 -0.30 -13.26 16 5 C 0.19 4.04 5.49 -5.20 -0.03 4.01 16 6 N -0.55 -12.54 2.01 -175.98 -0.35 -12.90 16 7 C -0.26 -6.69 9.64 -15.06 -0.15 -6.84 16 8 H 0.09 2.23 7.93 -52.49 -0.42 1.82 16 9 C 0.01 0.16 4.81 -17.43 -0.08 0.08 16 10 N -0.90 -24.62 9.38 55.49 0.52 -24.10 16 11 Si 0.91 21.21 29.62 -169.99 -5.03 16.18 16 12 H -0.28 -6.57 7.11 56.52 0.40 -6.17 16 13 H -0.29 -6.87 7.11 56.52 0.40 -6.47 16 14 H -0.28 -6.57 7.11 56.52 0.40 -6.17 16 15 C 0.19 3.59 5.96 -5.19 -0.03 3.56 16 16 C 0.09 1.57 6.37 -82.42 -0.52 1.05 16 17 C 0.07 1.04 10.86 -17.38 -0.19 0.85 16 18 N -0.44 -6.78 10.49 -10.17 -0.11 -6.89 16 19 C 0.10 1.48 7.29 -17.27 -0.13 1.35 16 20 Cl -0.03 -0.40 29.13 -51.86 -1.51 -1.92 16 21 C 0.08 1.11 11.01 -17.33 -0.19 0.92 16 22 N -0.40 -7.02 10.42 -9.26 -0.10 -7.12 16 23 H 0.08 1.05 8.14 -51.93 -0.42 0.63 16 24 H 0.05 0.99 8.13 -51.93 -0.42 0.56 16 25 H 0.05 0.74 8.13 -51.93 -0.42 0.31 16 26 H 0.05 0.95 8.12 -51.93 -0.42 0.53 16 27 H 0.11 2.70 6.46 -51.93 -0.34 2.37 16 28 H 0.26 7.03 8.31 -40.82 -0.34 6.69 16 29 H 0.07 1.13 7.98 -51.93 -0.41 0.71 16 30 H 0.08 1.58 8.04 -51.93 -0.42 1.17 16 31 H 0.17 2.13 8.06 -52.49 -0.42 1.70 16 32 H 0.17 1.95 8.06 -52.49 -0.42 1.53 16 LS Contribution 304.24 15.07 4.58 4.58 Total: -1.00 -30.86 304.24 -5.99 -36.86 By element: Atomic # 1 Polarization: 2.47 SS G_CDS: -3.25 Total: -0.79 kcal Atomic # 6 Polarization: 17.63 SS G_CDS: -0.03 Total: 17.60 kcal Atomic # 7 Polarization: -50.98 SS G_CDS: -0.04 Total: -51.01 kcal Atomic # 8 Polarization: -20.80 SS G_CDS: -0.71 Total: -21.51 kcal Atomic # 14 Polarization: 21.21 SS G_CDS: -5.03 Total: 16.18 kcal Atomic # 17 Polarization: -0.40 SS G_CDS: -1.51 Total: -1.92 kcal Total LS contribution 4.58 Total: 4.58 kcal Total: -30.86 -5.99 -36.86 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000788483939.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 25.180 kcal (2) G-P(sol) polarization free energy of solvation -30.865 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -5.685 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.992 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.857 kcal (6) G-S(sol) free energy of system = (1) + (5) -11.676 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds