Wall clock time and date at job start Fri Apr 10 2020 17:36:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 N 1.33695 * 126.27365 * 2 1 4 4 C 1.30613 * 108.99146 * 179.97438 * 3 2 1 5 5 O 1.33658 * 109.15911 * 0.02562 * 4 3 2 6 6 C 1.35341 * 107.68729 * 359.97438 * 5 4 3 7 7 C 1.46722 * 126.65036 * 179.97438 * 6 5 4 8 8 O 1.21685 * 120.00223 * 180.02562 * 7 6 5 9 9 N 1.34778 * 119.99426 * 0.02942 * 7 6 5 10 10 C 1.46501 * 119.99370 * 179.97438 * 9 7 6 11 11 C 1.53007 * 109.46833 * 179.97438 * 10 9 7 12 12 C 1.53040 * 109.46227 * 295.02905 * 11 10 9 13 13 C 1.53193 * 109.31042 * 178.59678 * 12 11 10 14 14 N 1.46932 * 108.76234 * 54.66082 * 13 12 11 15 15 C 1.36938 * 120.63180 * 126.36001 * 14 13 12 16 16 H 1.07997 * 120.00003 * 331.86147 * 15 14 13 17 17 C 1.38812 * 119.99907 * 151.85418 * 15 14 13 18 18 N 1.31612 * 120.00076 * 343.07081 * 17 15 14 19 19 Si 1.86797 * 119.99648 * 163.06539 * 17 15 14 20 20 H 1.48500 * 109.47045 * 90.00378 * 19 17 15 21 21 H 1.48505 * 109.47258 * 210.00331 * 19 17 15 22 22 H 1.48501 * 109.47638 * 330.00262 * 19 17 15 23 23 C 1.46923 * 118.73405 * 306.37753 * 14 13 12 24 24 C 1.53035 * 109.45844 * 174.97353 * 11 10 9 25 25 H 1.08994 * 109.47314 * 270.02612 * 1 2 3 26 26 H 1.09008 * 109.47247 * 30.02071 * 1 2 3 27 27 H 1.08999 * 109.47429 * 150.02376 * 1 2 3 28 28 H 1.08004 * 125.42263 * 180.02562 * 4 3 2 29 29 H 0.96991 * 120.00544 * 359.97438 * 9 7 6 30 30 H 1.09001 * 109.47480 * 299.99797 * 10 9 7 31 31 H 1.09002 * 109.47386 * 60.00249 * 10 9 7 32 32 H 1.09001 * 109.45642 * 55.00631 * 11 10 9 33 33 H 1.08996 * 109.49529 * 298.56657 * 12 11 10 34 34 H 1.09001 * 109.49513 * 58.65937 * 12 11 10 35 35 H 1.08995 * 109.60096 * 294.86546 * 13 12 11 36 36 H 1.09000 * 109.69913 * 174.50045 * 13 12 11 37 37 H 0.97004 * 120.00262 * 179.97438 * 18 17 15 38 38 H 1.09006 * 109.58847 * 293.82132 * 23 14 13 39 39 H 1.09002 * 109.70168 * 173.47008 * 23 14 13 40 40 H 1.09009 * 109.49883 * 301.33899 * 24 11 10 41 41 H 1.09002 * 109.50258 * 61.40500 * 24 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2980 1.0779 0.0000 4 6 3.5452 0.6898 0.0006 5 8 3.5889 -0.6460 0.0004 6 6 2.3137 -1.0992 0.0002 7 6 1.8826 -2.5017 -0.0005 8 8 0.6965 -2.7737 -0.0010 9 7 2.8004 -3.4887 -0.0006 10 6 2.3699 -4.8890 -0.0008 11 6 3.5990 -5.8003 -0.0014 12 6 4.3717 -5.6133 -1.3091 13 6 5.6201 -6.5011 -1.2913 14 7 5.2107 -7.8869 -1.0255 15 6 5.5896 -8.8997 -1.8657 16 1 5.7759 -8.6943 -2.9094 17 6 5.7343 -10.1904 -1.3758 18 7 5.8388 -10.3945 -0.0798 19 14 5.7805 -11.6376 -2.5560 20 1 7.1845 -11.9005 -2.9620 21 1 5.2254 -12.8409 -1.8857 22 1 4.9683 -11.3220 -3.7585 23 6 4.3868 -8.1653 0.1587 24 6 3.1525 -7.2586 0.1248 25 1 -0.3633 0.0005 1.0276 26 1 -0.3634 0.8899 -0.5142 27 1 -0.3634 -0.8902 -0.5134 28 1 4.4044 1.3443 0.0011 29 1 3.7457 -3.2719 -0.0005 30 1 1.7720 -5.0855 0.8892 31 1 1.7721 -5.0853 -0.8908 32 1 4.2420 -5.5433 0.8403 33 1 3.7373 -5.8940 -2.1498 34 1 4.6692 -4.5695 -1.4098 35 1 6.2977 -6.1633 -0.5072 36 1 6.1229 -6.4475 -2.2569 37 1 5.9396 -11.2965 0.2627 38 1 4.9639 -7.9634 1.0611 39 1 4.0736 -9.2093 0.1513 40 1 2.5820 -7.3861 1.0449 41 1 2.5292 -7.5236 -0.7293 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000362532589.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 17:36:32 Heat of formation + Delta-G solvation = -2.610975 kcal Electronic energy + Delta-G solvation = -23279.147463 eV Core-core repulsion = 19775.026461 eV Total energy + Delta-G solvation = -3504.121003 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 293.153 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -43.73988 -39.76226 -37.88115 -35.79075 -34.96110 -32.95751 -31.91571 -30.84290 -29.79883 -28.38661 -26.73810 -24.48159 -23.60702 -22.35863 -21.92414 -21.05764 -20.75229 -19.23301 -18.38746 -17.20164 -16.86617 -16.64692 -16.09006 -15.23398 -14.92159 -14.81008 -14.27359 -14.02009 -13.63275 -13.53637 -13.49090 -13.27910 -13.18406 -12.49297 -12.42111 -12.36462 -11.94791 -11.42100 -11.37902 -11.19752 -11.02362 -10.72860 -10.55797 -10.40942 -10.27114 -10.23768 -9.93450 -9.60897 -9.49257 -9.39503 -9.03669 -8.48985 -6.69176 -5.81169 -3.23541 0.54073 2.11748 2.17580 2.88017 3.05144 3.35955 3.43279 3.45741 3.72369 4.42546 4.47980 4.52019 4.99776 5.13261 5.17681 5.18422 5.32243 5.38491 5.41134 5.55556 5.57291 5.64855 5.78935 5.84102 5.97774 6.00183 6.07412 6.26349 6.28082 6.40610 6.55854 6.63683 6.71689 6.77162 6.94009 7.11246 7.32519 7.36568 7.63089 7.77581 7.87626 8.43213 9.19480 9.82906 10.39510 11.27457 Molecular weight = 293.15amu Principal moments of inertia in cm(-1) A = 0.037546 B = 0.002851 C = 0.002758 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 745.581781 B = 9819.608115 C =10148.270475 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.082 4.082 2 C 0.077 3.923 3 N -0.495 5.495 4 C 0.201 3.799 5 O -0.190 6.190 6 C -0.113 4.113 7 C 0.605 3.395 8 O -0.517 6.517 9 N -0.710 5.710 10 C 0.122 3.878 11 C -0.091 4.091 12 C -0.128 4.128 13 C 0.145 3.855 14 N -0.592 5.592 15 C -0.253 4.253 16 H 0.065 0.935 17 C 0.002 3.998 18 N -0.903 5.903 19 Si 0.902 3.098 20 H -0.287 1.287 21 H -0.289 1.289 22 H -0.279 1.279 23 C 0.172 3.828 24 C -0.133 4.133 25 H 0.082 0.918 26 H 0.076 0.924 27 H 0.096 0.904 28 H 0.257 0.743 29 H 0.406 0.594 30 H 0.070 0.930 31 H 0.071 0.929 32 H 0.070 0.930 33 H 0.061 0.939 34 H 0.046 0.954 35 H 0.016 0.984 36 H 0.053 0.947 37 H 0.254 0.746 38 H 0.017 0.983 39 H 0.088 0.912 40 H 0.052 0.948 41 H 0.058 0.942 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.803 19.694 1.711 20.602 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.139 4.139 2 C -0.047 4.047 3 N -0.224 5.224 4 C -0.024 4.024 5 O -0.076 6.076 6 C -0.168 4.168 7 C 0.390 3.610 8 O -0.395 6.395 9 N -0.360 5.360 10 C -0.001 4.001 11 C -0.110 4.110 12 C -0.167 4.167 13 C 0.019 3.981 14 N -0.315 5.315 15 C -0.383 4.383 16 H 0.082 0.918 17 C -0.196 4.196 18 N -0.548 5.548 19 Si 0.731 3.269 20 H -0.214 1.214 21 H -0.215 1.215 22 H -0.205 1.205 23 C 0.046 3.954 24 C -0.172 4.172 25 H 0.100 0.900 26 H 0.095 0.905 27 H 0.114 0.886 28 H 0.272 0.728 29 H 0.241 0.759 30 H 0.088 0.912 31 H 0.090 0.910 32 H 0.088 0.912 33 H 0.079 0.921 34 H 0.065 0.935 35 H 0.034 0.966 36 H 0.072 0.928 37 H 0.064 0.936 38 H 0.036 0.964 39 H 0.106 0.894 40 H 0.070 0.930 41 H 0.077 0.923 Dipole moment (debyes) X Y Z Total from point charges -6.744 19.864 1.787 21.054 hybrid contribution 1.037 -1.127 -0.495 1.609 sum -5.708 18.737 1.292 19.630 Atomic orbital electron populations 1.20401 0.85278 1.04425 1.03759 1.22084 0.98444 0.86343 0.97837 1.70358 1.01367 1.31465 1.19234 1.28349 0.97630 0.79440 0.96961 1.84504 1.29648 1.24454 1.68991 1.23023 0.81405 0.96449 1.15936 1.16324 0.85896 0.81322 0.77508 1.90861 1.15734 1.81878 1.51029 1.46028 1.09859 1.06797 1.73333 1.21723 0.97949 0.77967 1.02424 1.21331 0.94858 0.95830 0.98951 1.22088 0.99413 0.98479 0.96756 1.20883 0.92716 0.86021 0.98495 1.44051 1.57517 1.01646 1.28308 1.19169 1.41300 0.87570 0.90214 0.91775 1.25042 1.00287 0.98572 0.95740 1.70024 1.52985 1.20442 1.11312 0.86315 0.77786 0.82351 0.80427 1.21409 1.21534 1.20479 1.20758 0.87783 0.98518 0.88343 1.22183 1.00866 0.93676 1.00511 0.89981 0.90485 0.88553 0.72763 0.75905 0.91214 0.91048 0.91190 0.92065 0.93534 0.96600 0.92848 0.93621 0.96449 0.89356 0.92968 0.92288 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.80 9.87 36.01 0.36 -0.45 16 2 C 0.08 0.89 7.16 -82.46 -0.59 0.30 16 3 N -0.49 -5.27 11.26 -10.88 -0.12 -5.40 16 4 C 0.20 1.55 13.21 52.24 0.69 2.24 16 5 O -0.19 -1.88 10.57 4.45 0.05 -1.83 16 6 C -0.11 -1.34 7.18 -36.84 -0.26 -1.61 16 7 C 0.60 8.02 7.79 -12.83 -0.10 7.92 16 8 O -0.52 -7.99 14.79 5.20 0.08 -7.91 16 9 N -0.71 -8.68 5.27 -61.60 -0.32 -9.01 16 10 C 0.12 1.64 5.06 -4.04 -0.02 1.62 16 11 C -0.09 -1.38 2.19 -90.58 -0.20 -1.57 16 12 C -0.13 -2.05 5.25 -26.61 -0.14 -2.19 16 13 C 0.15 2.91 6.52 -3.71 -0.02 2.89 16 14 N -0.59 -14.46 2.99 -172.32 -0.52 -14.97 16 15 C -0.25 -6.85 9.58 -15.06 -0.14 -6.99 16 16 H 0.06 1.71 7.88 -52.49 -0.41 1.30 16 17 C 0.00 0.06 4.92 -17.43 -0.09 -0.03 16 18 N -0.90 -25.89 11.19 55.49 0.62 -25.27 16 19 Si 0.90 21.47 29.59 -169.99 -5.03 16.44 16 20 H -0.29 -6.84 7.11 56.52 0.40 -6.44 16 21 H -0.29 -6.93 7.11 56.52 0.40 -6.52 16 22 H -0.28 -6.54 7.11 56.52 0.40 -6.14 16 23 C 0.17 3.95 5.30 -3.71 -0.02 3.93 16 24 C -0.13 -2.37 5.36 -26.61 -0.14 -2.51 16 25 H 0.08 0.74 8.14 -51.93 -0.42 0.31 16 26 H 0.08 0.65 8.14 -51.92 -0.42 0.22 16 27 H 0.10 1.04 6.47 -51.93 -0.34 0.70 16 28 H 0.26 0.53 8.06 -52.48 -0.42 0.11 16 29 H 0.41 4.38 7.45 -40.82 -0.30 4.08 16 30 H 0.07 0.94 8.14 -51.93 -0.42 0.52 16 31 H 0.07 1.01 8.14 -51.93 -0.42 0.59 16 32 H 0.07 1.06 8.14 -51.93 -0.42 0.64 16 33 H 0.06 1.05 8.14 -51.93 -0.42 0.62 16 34 H 0.05 0.62 7.15 -51.93 -0.37 0.25 16 35 H 0.02 0.32 8.14 -51.93 -0.42 -0.10 16 36 H 0.05 1.06 7.93 -51.93 -0.41 0.65 16 37 H 0.25 7.04 8.31 -40.82 -0.34 6.70 16 38 H 0.02 0.42 8.14 -51.93 -0.42 0.00 16 39 H 0.09 2.30 6.06 -51.93 -0.31 1.98 16 40 H 0.05 0.84 8.14 -51.92 -0.42 0.42 16 41 H 0.06 1.09 8.14 -51.93 -0.42 0.67 16 LS Contribution 337.10 15.07 5.08 5.08 Total: -1.00 -31.99 337.10 -6.79 -38.78 By element: Atomic # 1 Polarization: 6.49 SS G_CDS: -5.94 Total: 0.55 kcal Atomic # 6 Polarization: 4.22 SS G_CDS: -0.68 Total: 3.54 kcal Atomic # 7 Polarization: -54.31 SS G_CDS: -0.34 Total: -54.65 kcal Atomic # 8 Polarization: -9.87 SS G_CDS: 0.12 Total: -9.74 kcal Atomic # 14 Polarization: 21.47 SS G_CDS: -5.03 Total: 16.44 kcal Total LS contribution 5.08 Total: 5.08 kcal Total: -31.99 -6.79 -38.78 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000362532589.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 36.171 kcal (2) G-P(sol) polarization free energy of solvation -31.994 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 4.177 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.788 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.782 kcal (6) G-S(sol) free energy of system = (1) + (5) -2.611 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds