Wall clock time and date at job start Fri Apr 10 2020 17:37:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 N 1.46503 * 109.46814 * 2 1 4 4 N 1.28709 * 126.03522 * 271.80876 * 3 2 1 5 5 N 1.28513 * 110.63370 * 179.97438 * 4 3 2 6 6 C 1.33315 * 109.44226 * 359.76413 * 5 4 3 7 7 C 1.37008 * 106.37337 * 0.36881 * 6 5 4 8 8 C 1.47228 * 127.19161 * 179.90200 * 7 6 5 9 9 O 1.21619 * 120.00186 * 185.17594 * 8 7 6 10 10 N 1.34777 * 119.99994 * 5.18917 * 8 7 6 11 11 C 1.46493 * 120.00130 * 174.59750 * 10 8 7 12 12 H 1.09003 * 112.84915 * 23.79815 * 11 10 8 13 13 C 1.53782 * 113.61661 * 154.99496 * 11 10 8 14 14 C 1.53784 * 87.07954 * 89.20055 * 13 11 10 15 15 H 1.09002 * 113.61240 * 270.79983 * 14 13 11 16 16 C 1.52999 * 113.61372 * 139.98659 * 14 13 11 17 17 N 1.46496 * 109.47243 * 176.52729 * 16 14 13 18 18 C 1.36935 * 120.00048 * 179.71989 * 17 16 14 19 19 H 1.08002 * 120.00296 * 0.27400 * 18 17 16 20 20 C 1.38818 * 119.99987 * 180.27637 * 18 17 16 21 21 N 1.31619 * 119.99840 * 0.02562 * 20 18 17 22 22 Si 1.86800 * 119.99989 * 180.02562 * 20 18 17 23 23 H 1.48505 * 109.46950 * 59.99728 * 22 20 18 24 24 H 1.48499 * 109.47058 * 179.97438 * 22 20 18 25 25 H 1.48496 * 109.47171 * 300.00148 * 22 20 18 26 26 C 1.53772 * 87.17471 * 25.39137 * 14 13 11 27 27 H 1.09009 * 109.46783 * 179.97438 * 1 2 3 28 28 H 1.08992 * 109.47311 * 299.99590 * 1 2 3 29 29 H 1.09006 * 109.47295 * 60.00066 * 1 2 3 30 30 H 1.09006 * 109.46761 * 240.00185 * 2 1 3 31 31 H 1.08996 * 109.47221 * 120.00063 * 2 1 3 32 32 H 1.08003 * 126.81443 * 180.26444 * 6 5 4 33 33 H 0.96997 * 119.99879 * 354.58693 * 10 8 7 34 34 H 1.08997 * 113.61475 * 334.64941 * 13 11 10 35 35 H 1.08998 * 113.69372 * 203.75864 * 13 11 10 36 36 H 1.09000 * 109.47362 * 56.52164 * 16 14 13 37 37 H 1.09009 * 109.46966 * 296.52774 * 16 14 13 38 38 H 0.96999 * 120.00045 * 359.97438 * 17 16 14 39 39 H 0.97000 * 119.99538 * 180.02562 * 21 20 18 40 40 H 1.08999 * 113.61500 * 89.15947 * 26 14 13 41 41 H 1.08996 * 113.61641 * 220.05903 * 26 14 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0183 1.3813 0.0000 4 7 2.2397 2.1061 -1.0403 5 7 2.6622 3.2708 -0.6991 6 6 2.7279 3.3473 0.6302 7 6 2.3194 2.1298 1.1077 8 6 2.2188 1.7146 2.5166 9 8 1.9287 0.5663 2.7930 10 7 2.4480 2.6071 3.5002 11 6 2.2332 2.2274 4.8986 12 1 2.2973 1.1512 5.0596 13 6 3.0666 3.0500 5.8954 14 6 1.8951 4.0456 5.9324 15 1 1.9622 4.8271 5.1755 16 6 1.6020 4.5955 7.3297 17 7 0.5309 5.5915 7.2478 18 6 0.0920 6.2199 8.3825 19 1 0.5384 5.9844 9.3373 20 6 -0.9269 7.1596 8.3056 21 7 -1.4714 7.4462 7.1421 22 14 -1.5252 8.0173 9.8535 23 1 -0.3989 8.7593 10.4750 24 1 -2.6110 8.9682 9.5042 25 1 -2.0407 7.0067 10.8116 26 6 0.9856 2.8733 5.5284 27 1 -0.3633 -1.0278 -0.0005 28 1 -0.3633 0.5137 0.8899 29 1 -0.3634 0.5138 -0.8900 30 1 1.8933 -0.5138 -0.8901 31 1 1.8933 -0.5138 0.8899 32 1 3.0425 4.1992 1.2147 33 1 2.7553 3.5009 3.2821 34 1 3.9783 3.4642 5.4649 35 1 3.2392 2.5434 6.8450 36 1 2.5012 5.0612 7.7329 37 1 1.2909 3.7803 7.9831 38 1 0.1301 5.8033 6.3902 39 1 -2.1831 8.1030 7.0884 40 1 0.5873 2.3172 6.3770 41 1 0.2197 3.1450 4.8021 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001485682891.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 17:37:59 Heat of formation + Delta-G solvation = 92.337509 kcal Electronic energy + Delta-G solvation = -22967.113561 eV Core-core repulsion = 19499.402585 eV Total energy + Delta-G solvation = -3467.710977 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 293.159 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -43.58923 -40.29866 -38.43128 -35.82386 -34.61494 -33.48888 -31.60986 -31.12409 -30.72409 -27.00142 -25.61157 -25.22759 -24.20253 -23.35848 -22.42739 -21.45168 -20.80022 -19.19608 -18.35565 -17.25448 -17.04682 -16.69469 -16.10106 -15.31761 -15.09949 -14.91069 -14.72489 -14.38818 -14.03013 -13.98012 -13.39150 -13.32628 -12.83623 -12.65644 -12.45547 -12.36661 -12.20433 -11.98115 -11.76868 -11.26732 -11.07205 -10.83244 -10.61101 -10.52533 -10.43047 -10.33093 -10.16420 -9.90205 -9.81787 -9.64767 -9.21094 -8.86314 -6.92148 -5.77130 -3.05561 0.63056 1.75430 2.03010 2.73286 2.82273 3.43402 3.47801 3.48899 3.97732 4.13187 4.37874 4.46304 4.55003 4.55232 4.63904 4.72127 4.79975 5.01117 5.03495 5.04020 5.15974 5.44402 5.56442 5.58026 5.63846 5.66987 5.77162 5.85294 5.90434 6.03587 6.09690 6.12058 6.19729 6.35366 6.50329 6.74331 6.87791 7.10555 7.68603 7.73787 8.06666 8.42062 9.53039 10.11750 10.45961 11.45697 Molecular weight = 293.16amu Principal moments of inertia in cm(-1) A = 0.022754 B = 0.002847 C = 0.002754 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1230.250448 B = 9831.654089 C =10165.669714 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.166 4.166 2 C 0.102 3.898 3 N -0.252 5.252 4 N -0.059 5.059 5 N -0.273 5.273 6 C 0.004 3.996 7 C -0.071 4.071 8 C 0.600 3.400 9 O -0.536 6.536 10 N -0.689 5.689 11 C 0.116 3.884 12 H 0.104 0.896 13 C -0.137 4.137 14 C -0.115 4.115 15 H 0.089 0.911 16 C 0.162 3.838 17 N -0.732 5.732 18 C -0.241 4.241 19 H 0.069 0.931 20 C -0.014 4.014 21 N -0.934 5.934 22 Si 0.907 3.093 23 H -0.286 1.286 24 H -0.291 1.291 25 H -0.286 1.286 26 C -0.138 4.138 27 H 0.087 0.913 28 H 0.068 0.932 29 H 0.066 0.934 30 H 0.107 0.893 31 H 0.124 0.876 32 H 0.199 0.801 33 H 0.406 0.594 34 H 0.071 0.929 35 H 0.097 0.903 36 H 0.019 0.981 37 H 0.020 0.980 38 H 0.383 0.617 39 H 0.255 0.745 40 H 0.093 0.907 41 H 0.069 0.931 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 9.395 -15.413 -12.826 22.144 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.224 4.224 2 C -0.018 4.018 3 N -0.049 5.049 4 N -0.040 5.040 5 N -0.136 5.136 6 C -0.157 4.157 7 C -0.205 4.205 8 C 0.384 3.616 9 O -0.413 6.413 10 N -0.340 5.340 11 C 0.011 3.989 12 H 0.122 0.878 13 C -0.175 4.175 14 C -0.133 4.133 15 H 0.107 0.893 16 C 0.035 3.965 17 N -0.376 5.376 18 C -0.372 4.372 19 H 0.087 0.913 20 C -0.210 4.210 21 N -0.583 5.583 22 Si 0.738 3.262 23 H -0.213 1.213 24 H -0.217 1.217 25 H -0.213 1.213 26 C -0.177 4.177 27 H 0.106 0.894 28 H 0.087 0.913 29 H 0.085 0.915 30 H 0.125 0.875 31 H 0.142 0.858 32 H 0.216 0.784 33 H 0.241 0.759 34 H 0.090 0.910 35 H 0.116 0.884 36 H 0.036 0.964 37 H 0.038 0.962 38 H 0.217 0.783 39 H 0.065 0.935 40 H 0.112 0.888 41 H 0.088 0.912 Dipole moment (debyes) X Y Z Total from point charges 9.107 -16.167 -13.996 23.242 hybrid contribution -0.450 1.034 1.596 1.954 sum 8.657 -15.133 -12.401 21.394 Atomic orbital electron populations 1.22108 0.92509 1.04192 1.03563 1.22464 0.96926 0.75610 1.06790 1.47911 1.40046 1.13610 1.03328 1.78267 1.15270 0.98733 1.11715 1.74921 1.15831 1.10298 1.12514 1.23952 1.02578 0.97103 0.92084 1.21946 1.13261 0.94317 0.90968 1.16635 0.77189 0.85243 0.82544 1.90783 1.48668 1.18202 1.83639 1.45334 1.67224 1.15651 1.05753 1.22090 0.98044 1.00178 0.78588 0.87774 1.23317 0.97507 0.97594 0.99116 1.22784 0.94932 0.95920 0.99690 0.89301 1.20629 0.91737 0.91801 0.92353 1.42331 1.41235 1.45962 1.08064 1.19192 1.14040 1.16154 0.87796 0.91294 1.24739 0.99312 1.00175 0.96775 1.69647 1.28931 1.36941 1.22733 0.86271 0.78157 0.79239 0.82541 1.21276 1.21689 1.21292 1.23457 0.96204 0.97288 1.00704 0.89391 0.91307 0.91478 0.87504 0.85764 0.78403 0.75873 0.91019 0.88415 0.96362 0.96222 0.78328 0.93479 0.88809 0.91175 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -1.20 10.24 37.16 0.38 -0.82 16 2 C 0.10 0.80 6.72 -4.04 -0.03 0.77 16 3 N -0.25 -2.72 3.39 -57.37 -0.19 -2.91 16 4 N -0.06 -0.74 13.14 60.35 0.79 0.05 16 5 N -0.27 -3.49 12.35 30.47 0.38 -3.11 16 6 C 0.00 0.04 11.55 -17.35 -0.20 -0.16 16 7 C -0.07 -0.76 6.98 -82.33 -0.57 -1.34 16 8 C 0.60 6.73 7.80 -12.61 -0.10 6.63 16 9 O -0.54 -7.13 14.38 5.26 0.08 -7.05 16 10 N -0.69 -6.75 5.25 -54.07 -0.28 -7.03 16 11 C 0.12 1.25 4.36 -67.03 -0.29 0.96 16 12 H 0.10 1.17 7.41 -51.93 -0.38 0.79 16 13 C -0.14 -1.43 7.39 -25.92 -0.19 -1.63 16 14 C -0.11 -1.61 3.63 -89.81 -0.33 -1.94 16 15 H 0.09 1.27 8.14 -51.93 -0.42 0.84 16 16 C 0.16 3.07 6.08 -4.04 -0.02 3.04 16 17 N -0.73 -18.10 5.60 -59.91 -0.34 -18.44 16 18 C -0.24 -6.68 9.99 -15.06 -0.15 -6.83 16 19 H 0.07 1.85 7.83 -52.49 -0.41 1.44 16 20 C -0.01 -0.40 5.50 -17.43 -0.10 -0.50 16 21 N -0.93 -28.09 13.06 55.49 0.72 -27.37 16 22 Si 0.91 22.30 29.55 -169.99 -5.02 17.27 16 23 H -0.29 -6.91 7.11 56.52 0.40 -6.51 16 24 H -0.29 -7.21 7.11 56.52 0.40 -6.81 16 25 H -0.29 -6.92 7.11 56.52 0.40 -6.52 16 26 C -0.14 -1.84 7.44 -25.83 -0.19 -2.04 16 27 H 0.09 0.45 8.14 -51.92 -0.42 0.02 16 28 H 0.07 0.63 8.14 -51.93 -0.42 0.21 16 29 H 0.07 0.50 8.14 -51.93 -0.42 0.08 16 30 H 0.11 0.60 8.14 -51.93 -0.42 0.18 16 31 H 0.12 1.02 6.26 -51.93 -0.33 0.70 16 32 H 0.20 1.30 7.56 -52.48 -0.40 0.90 16 33 H 0.41 3.14 7.74 -40.82 -0.32 2.83 16 34 H 0.07 0.65 8.14 -51.93 -0.42 0.23 16 35 H 0.10 0.97 8.10 -51.93 -0.42 0.55 16 36 H 0.02 0.35 8.14 -51.93 -0.42 -0.07 16 37 H 0.02 0.38 7.88 -51.92 -0.41 -0.03 16 38 H 0.38 9.97 7.67 -40.82 -0.31 9.66 16 39 H 0.26 7.46 8.31 -40.82 -0.34 7.12 16 40 H 0.09 1.29 7.92 -51.93 -0.41 0.88 16 41 H 0.07 1.02 8.14 -51.93 -0.42 0.60 16 LS Contribution 347.52 15.07 5.24 5.24 Total: -1.00 -33.78 347.52 -6.33 -40.11 By element: Atomic # 1 Polarization: 13.00 SS G_CDS: -5.90 Total: 7.09 kcal Atomic # 6 Polarization: -2.05 SS G_CDS: -1.79 Total: -3.84 kcal Atomic # 7 Polarization: -59.89 SS G_CDS: 1.08 Total: -58.81 kcal Atomic # 8 Polarization: -7.13 SS G_CDS: 0.08 Total: -7.05 kcal Atomic # 14 Polarization: 22.30 SS G_CDS: -5.02 Total: 17.27 kcal Total LS contribution 5.24 Total: 5.24 kcal Total: -33.78 -6.33 -40.11 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001485682891.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 132.444 kcal (2) G-P(sol) polarization free energy of solvation -33.779 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 98.666 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.328 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.107 kcal (6) G-S(sol) free energy of system = (1) + (5) 92.338 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds