Wall clock time and date at job start Fri Apr 10 2020 17:49:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.38194 * 119.95424 * 2 1 4 4 C 1.38128 * 120.13890 * 180.02562 * 3 2 1 5 5 C 1.38982 * 120.05074 * 359.97031 * 4 3 2 6 6 N 1.39677 * 120.03661 * 180.02562 * 5 4 3 7 7 C 1.46501 * 120.00384 * 0.02562 * 6 5 4 8 8 C 1.50698 * 109.47139 * 179.97438 * 7 6 5 9 9 O 1.21292 * 119.99948 * 359.97438 * 8 7 6 10 10 N 1.34772 * 120.00142 * 179.97438 * 8 7 6 11 11 C 1.37097 * 120.00568 * 179.97438 * 10 8 7 12 12 H 1.08005 * 119.99604 * 0.02562 * 11 10 8 13 13 C 1.38942 * 120.00387 * 179.97438 * 11 10 8 14 14 N 1.31414 * 120.00286 * 180.02562 * 13 11 10 15 15 Si 1.86800 * 120.00095 * 0.02562 * 13 11 10 16 16 H 1.48503 * 109.47064 * 90.00012 * 15 13 11 17 17 H 1.48504 * 109.47150 * 209.99938 * 15 13 11 18 18 H 1.48503 * 109.47107 * 329.99730 * 15 13 11 19 19 C 1.38780 * 119.91802 * 359.81486 * 5 4 3 20 20 C 1.38711 * 119.85762 * 0.44381 * 19 5 4 21 21 N 1.40259 * 120.02607 * 179.79188 * 20 19 5 22 22 C 1.35070 * 127.38651 * 312.62541 * 21 20 19 23 23 N 1.30737 * 107.27377 * 179.97438 * 22 21 20 24 24 N 1.28421 * 110.64692 * 359.97438 * 23 22 21 25 25 N 1.28951 * 110.20269 * 0.02562 * 24 23 22 26 26 H 1.09004 * 109.47152 * 264.63438 * 1 2 3 27 27 H 1.09001 * 109.47177 * 24.63444 * 1 2 3 28 28 H 1.09000 * 109.46755 * 144.63822 * 1 2 3 29 29 H 1.07997 * 119.93442 * 0.02562 * 3 2 1 30 30 H 1.07993 * 119.97580 * 179.97438 * 4 3 2 31 31 H 0.97005 * 119.99776 * 179.97438 * 6 5 4 32 32 H 1.09004 * 109.46386 * 299.99424 * 7 6 5 33 33 H 1.08998 * 109.47206 * 59.99495 * 7 6 5 34 34 H 0.97000 * 119.99841 * 0.02562 * 10 8 7 35 35 H 0.96994 * 120.00295 * 180.02562 * 14 13 11 36 36 H 1.07997 * 120.06884 * 180.22863 * 19 5 4 37 37 H 1.08007 * 126.36385 * 359.97438 * 22 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1970 1.1973 0.0000 4 6 3.5783 1.2018 -0.0005 5 6 4.2781 0.0010 -0.0005 6 7 5.6749 0.0059 -0.0004 7 6 6.4031 1.2771 0.0000 8 6 7.8856 1.0068 0.0006 9 8 8.2938 -0.1354 0.0010 10 7 8.7579 2.0341 0.0005 11 6 10.1067 1.7883 0.0016 12 1 10.4702 0.7712 0.0020 13 6 11.0060 2.8474 0.0010 14 7 12.2988 2.6118 0.0015 15 14 10.3773 4.6065 -0.0004 16 1 10.2104 5.0736 1.3993 17 1 11.3527 5.4802 -0.7009 18 1 9.0691 4.6641 -0.7009 19 6 3.5875 -1.2027 0.0041 20 6 2.2004 -1.2030 -0.0009 21 7 1.4988 -2.4175 -0.0007 22 6 1.7206 -3.4929 -0.7873 23 7 0.8421 -4.4031 -0.4573 24 7 0.0803 -3.9768 0.4846 25 7 0.4144 -2.7770 0.8188 26 1 -0.3634 -0.0961 1.0232 27 1 -0.3633 0.9341 -0.4284 28 1 -0.3633 -0.8381 -0.5948 29 1 1.6552 2.1316 0.0004 30 1 4.1148 2.1390 -0.0010 31 1 6.1628 -0.8325 0.0000 32 1 6.1378 1.8480 -0.8899 33 1 6.1378 1.8475 0.8902 34 1 8.4315 2.9475 0.0006 35 1 12.9266 3.3512 0.0014 36 1 4.1288 -2.1371 0.0079 37 1 2.4823 -3.5839 -1.5477 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000175114948.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 17:49:23 Heat of formation + Delta-G solvation = 120.950069 kcal Electronic energy + Delta-G solvation = -22915.070730 eV Core-core repulsion = 19309.571393 eV Total energy + Delta-G solvation = -3605.499337 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 302.123 amu Computer time = 0.40 seconds Orbital eigenvalues (eV) -43.38887 -40.12376 -38.74700 -36.37035 -34.69782 -34.17671 -32.56104 -32.00585 -31.71237 -30.46945 -28.25447 -25.96668 -25.00846 -24.20309 -23.44776 -22.46206 -21.16321 -19.74362 -18.76263 -18.56551 -17.14250 -16.74061 -16.24427 -16.06951 -15.62974 -15.18265 -15.11305 -14.83224 -14.34460 -14.23510 -13.89286 -13.57106 -13.36319 -13.09171 -12.89683 -12.69071 -12.49467 -12.30635 -12.23380 -11.97576 -11.61505 -11.40136 -11.32324 -11.19156 -10.76531 -10.68245 -10.17655 -10.08388 -9.82078 -9.18880 -8.92394 -8.43320 -7.57217 -6.51700 -4.05221 0.30127 1.10253 1.23739 1.59395 2.04198 2.86880 2.92275 3.02073 3.22523 3.34491 3.41776 3.89650 3.92008 4.32188 4.35259 4.51968 4.61053 4.71054 4.80193 4.96871 5.01197 5.12598 5.19091 5.25667 5.36261 5.41091 5.42711 5.53544 5.56242 5.73152 5.85284 5.99650 6.02382 6.19650 6.52177 7.04869 7.33969 7.64808 7.89858 8.17469 8.32191 8.70105 9.16949 9.49436 10.60355 Molecular weight = 302.12amu Principal moments of inertia in cm(-1) A = 0.030788 B = 0.002635 C = 0.002449 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 909.223787 B =10624.245110 C =11431.044720 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.103 4.103 2 C -0.127 4.127 3 C -0.054 4.054 4 C -0.180 4.180 5 C 0.242 3.758 6 N -0.717 5.717 7 C 0.108 3.892 8 C 0.435 3.565 9 O -0.577 6.577 10 N -0.574 5.574 11 C -0.313 4.313 12 H 0.121 0.879 13 C 0.046 3.954 14 N -0.871 5.871 15 Si 0.881 3.119 16 H -0.268 1.268 17 H -0.274 1.274 18 H -0.268 1.268 19 C -0.187 4.187 20 C 0.160 3.840 21 N -0.322 5.322 22 C 0.231 3.769 23 N -0.336 5.336 24 N -0.045 5.045 25 N -0.072 5.072 26 H 0.075 0.925 27 H 0.067 0.933 28 H 0.054 0.946 29 H 0.135 0.865 30 H 0.134 0.866 31 H 0.415 0.585 32 H 0.081 0.919 33 H 0.080 0.920 34 H 0.374 0.626 35 H 0.277 0.723 36 H 0.133 0.867 37 H 0.238 0.762 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -20.550 0.209 -2.193 20.668 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.160 4.160 2 C -0.131 4.131 3 C -0.073 4.073 4 C -0.203 4.203 5 C 0.134 3.866 6 N -0.347 5.347 7 C -0.020 4.020 8 C 0.221 3.779 9 O -0.461 6.461 10 N -0.212 5.212 11 C -0.441 4.441 12 H 0.139 0.861 13 C -0.159 4.159 14 N -0.510 5.510 15 Si 0.707 3.293 16 H -0.194 1.194 17 H -0.199 1.199 18 H -0.193 1.193 19 C -0.212 4.212 20 C 0.069 3.931 21 N -0.113 5.113 22 C -0.066 4.066 23 N -0.186 5.186 24 N -0.040 5.040 25 N -0.057 5.057 26 H 0.093 0.907 27 H 0.086 0.914 28 H 0.073 0.927 29 H 0.152 0.848 30 H 0.151 0.849 31 H 0.254 0.746 32 H 0.099 0.901 33 H 0.098 0.902 34 H 0.207 0.793 35 H 0.087 0.913 36 H 0.151 0.849 37 H 0.254 0.746 Dipole moment (debyes) X Y Z Total from point charges -20.997 -0.851 -1.451 21.064 hybrid contribution 0.877 1.672 -0.443 1.939 sum -20.120 0.820 -1.894 20.225 Atomic orbital electron populations 1.20646 0.90399 1.02129 1.02779 1.19466 0.96470 0.90934 1.06236 1.20694 0.93248 0.96806 0.96554 1.20916 0.94285 0.97023 1.08120 1.17458 0.83953 0.92732 0.92437 1.44541 1.01538 1.09318 1.79287 1.21044 0.92031 0.86628 1.02345 1.19545 0.86733 0.86127 0.85465 1.90559 1.78793 1.21191 1.55547 1.42120 1.07152 1.06647 1.65281 1.19435 0.78368 0.97372 1.48924 0.86090 1.25084 0.95113 0.98651 0.97051 1.69612 1.00837 1.32856 1.47678 0.86658 0.79092 0.84483 0.79114 1.19361 1.19895 1.19325 1.20250 0.91122 0.98132 1.11746 1.16884 0.89361 0.81115 1.05744 1.48968 1.24103 1.12688 1.25559 1.27550 0.99650 0.82874 0.96540 1.74474 1.05926 1.26193 1.11971 1.78064 1.17003 1.02587 1.06346 1.82730 1.00201 1.09450 1.13305 0.90663 0.91361 0.92683 0.84753 0.84853 0.74576 0.90135 0.90169 0.79317 0.91256 0.84946 0.74572 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -0.88 8.89 36.01 0.32 -0.56 16 2 C -0.13 -1.20 5.90 -104.41 -0.62 -1.82 16 3 C -0.05 -0.45 9.66 -39.64 -0.38 -0.83 16 4 C -0.18 -1.69 9.31 -39.35 -0.37 -2.06 16 5 C 0.24 2.65 6.65 -83.81 -0.56 2.09 16 6 N -0.72 -9.29 5.70 -59.82 -0.34 -9.64 16 7 C 0.11 1.47 5.39 -5.19 -0.03 1.44 16 8 C 0.44 8.67 7.85 -10.99 -0.09 8.58 16 9 O -0.58 -13.81 15.24 5.55 0.08 -13.73 16 10 N -0.57 -12.28 5.09 -10.97 -0.06 -12.34 16 11 C -0.31 -8.21 10.16 -14.94 -0.15 -8.36 16 12 H 0.12 3.67 7.39 -52.48 -0.39 3.28 16 13 C 0.05 1.17 5.50 -17.47 -0.10 1.07 16 14 N -0.87 -24.03 13.96 55.50 0.77 -23.26 16 15 Si 0.88 17.79 27.74 -169.99 -4.71 13.07 16 16 H -0.27 -5.33 7.11 56.52 0.40 -4.93 16 17 H -0.27 -5.61 7.11 56.52 0.40 -5.21 16 18 H -0.27 -4.81 6.52 56.52 0.37 -4.44 16 19 C -0.19 -1.91 9.52 -39.21 -0.37 -2.28 16 20 C 0.16 1.65 6.30 -83.60 -0.53 1.13 16 21 N -0.32 -3.48 3.15 -11.76 -0.04 -3.52 16 22 C 0.23 2.14 12.54 -90.15 -1.13 1.01 16 23 N -0.34 -4.09 12.15 29.64 0.36 -3.73 16 24 N -0.04 -0.61 13.39 60.35 0.81 0.20 16 25 N -0.07 -0.92 12.37 60.35 0.75 -0.18 16 26 H 0.07 0.67 8.14 -51.93 -0.42 0.24 16 27 H 0.07 0.45 8.05 -51.93 -0.42 0.03 16 28 H 0.05 0.53 7.21 -51.93 -0.37 0.16 16 29 H 0.13 0.80 8.06 -52.49 -0.42 0.37 16 30 H 0.13 1.07 6.72 -52.49 -0.35 0.72 16 31 H 0.41 5.93 7.45 -40.82 -0.30 5.63 16 32 H 0.08 0.92 7.95 -51.93 -0.41 0.51 16 33 H 0.08 0.93 7.95 -51.93 -0.41 0.52 16 34 H 0.37 6.83 5.76 -40.82 -0.24 6.60 16 35 H 0.28 7.02 8.31 -40.82 -0.34 6.68 16 36 H 0.13 1.21 8.05 -52.49 -0.42 0.79 16 37 H 0.24 1.07 8.06 -52.48 -0.42 0.65 16 LS Contribution 326.30 15.07 4.92 4.92 Total: -1.00 -31.95 326.30 -5.21 -37.16 By element: Atomic # 1 Polarization: 15.37 SS G_CDS: -3.76 Total: 11.61 kcal Atomic # 6 Polarization: 3.42 SS G_CDS: -4.00 Total: -0.58 kcal Atomic # 7 Polarization: -54.71 SS G_CDS: 2.26 Total: -52.45 kcal Atomic # 8 Polarization: -13.81 SS G_CDS: 0.08 Total: -13.73 kcal Atomic # 14 Polarization: 17.79 SS G_CDS: -4.71 Total: 13.07 kcal Total LS contribution 4.92 Total: 4.92 kcal Total: -31.95 -5.21 -37.16 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000175114948.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 158.108 kcal (2) G-P(sol) polarization free energy of solvation -31.949 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 126.159 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.209 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.158 kcal (6) G-S(sol) free energy of system = (1) + (5) 120.950 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.40 seconds