Wall clock time and date at job start Fri Apr 10 2020 17:53:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13600 * 1 3 3 C 1.47199 * 179.97438 * 2 1 4 4 N 1.46495 * 109.47582 * 357.17528 * 3 2 1 5 5 C 1.37109 * 120.00154 * 85.03509 * 4 3 2 6 6 H 1.07994 * 119.99794 * 210.41512 * 5 4 3 7 7 C 1.38948 * 119.99625 * 30.42085 * 5 4 3 8 8 N 1.31417 * 120.00096 * 40.41098 * 7 5 4 9 9 Si 1.86800 * 119.99995 * 220.40381 * 7 5 4 10 10 H 1.48492 * 109.47090 * 180.02562 * 9 7 5 11 11 H 1.48500 * 109.46606 * 60.00032 * 9 7 5 12 12 H 1.48495 * 109.46875 * 300.00411 * 9 7 5 13 13 C 1.34782 * 120.00002 * 265.04126 * 4 3 2 14 14 O 1.21287 * 119.99811 * 179.97438 * 13 4 3 15 15 C 1.50692 * 119.99711 * 359.97438 * 13 4 3 16 16 H 1.08999 * 110.66815 * 55.70254 * 15 13 4 17 17 C 1.54707 * 110.75268 * 292.48490 * 15 13 4 18 18 C 1.51649 * 101.92906 * 266.96785 * 17 15 13 19 19 C 1.37741 * 132.16516 * 164.59374 * 18 17 15 20 20 C 1.38448 * 119.96848 * 180.37718 * 19 18 17 21 21 Cl 1.73603 * 120.13004 * 179.97438 * 20 19 18 22 22 C 1.38390 * 119.74636 * 0.02562 * 20 19 18 23 23 C 1.37927 * 120.32982 * 359.78504 * 22 20 19 24 24 C 1.38876 * 107.04103 * 344.61682 * 18 17 15 25 25 O 1.36600 * 111.29274 * 358.89582 * 24 18 17 26 26 H 1.09000 * 109.47034 * 237.16933 * 3 2 1 27 27 H 1.09003 * 109.46872 * 117.17508 * 3 2 1 28 28 H 0.97002 * 119.99762 * 5.84612 * 8 7 5 29 29 H 1.09003 * 110.93435 * 25.12199 * 17 15 13 30 30 H 1.09000 * 110.94343 * 148.80881 * 17 15 13 31 31 H 1.08003 * 120.01779 * 0.35927 * 19 18 17 32 32 H 1.07996 * 119.83518 * 179.81472 * 22 20 19 33 33 H 1.07997 * 119.87224 * 180.02562 * 23 22 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 7 3.0970 -1.3786 0.0681 5 6 3.2291 -2.1166 -1.0799 6 1 3.1025 -3.1887 -1.0501 7 6 3.5258 -1.4851 -2.2814 8 7 4.3974 -0.5019 -2.3093 9 14 2.6861 -2.0337 -3.8573 10 1 3.1727 -1.2074 -4.9910 11 1 1.2169 -1.8686 -3.7185 12 1 3.0016 -3.4617 -4.1149 13 6 3.4171 -1.9221 1.2592 14 8 3.8215 -3.0642 1.3155 15 6 3.2724 -1.1108 2.5208 16 1 2.2547 -0.7334 2.6209 17 6 4.2929 0.0517 2.5450 18 6 5.4554 -0.5672 3.2967 19 6 6.7734 -0.1911 3.4334 20 6 7.6381 -0.9636 4.1899 21 17 9.3003 -0.4938 4.3644 22 6 7.1727 -2.1122 4.8057 23 6 5.8522 -2.4876 4.6726 24 6 4.9753 -1.7136 3.9164 25 8 3.6428 -1.8886 3.6718 26 1 2.9711 0.5580 0.8635 27 1 2.9711 0.4702 -0.9143 28 1 4.8959 -0.2729 -1.5093 29 1 4.5879 0.3321 1.5338 30 1 3.8928 0.9101 3.0847 31 1 7.1322 0.7058 2.9504 32 1 7.8467 -2.7174 5.3937 33 1 5.4968 -3.3852 5.1567 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000065595880.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 17:53:40 Heat of formation + Delta-G solvation = 0.894297 kcal Electronic energy + Delta-G solvation = -22441.020605 eV Core-core repulsion = 18880.149775 eV Total energy + Delta-G solvation = -3560.870830 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 306.056 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -41.36859 -38.88623 -37.57588 -36.31790 -36.05393 -34.87972 -33.01670 -31.93648 -29.88121 -29.49287 -27.76916 -25.36746 -23.60712 -22.40116 -21.81931 -19.98162 -18.43305 -17.72749 -17.24802 -16.80947 -16.39532 -16.05093 -15.15477 -14.80884 -14.22882 -14.02960 -13.93526 -13.72743 -13.54673 -13.32986 -13.20278 -12.88503 -12.50902 -12.38505 -12.22780 -12.08022 -11.69405 -11.54041 -11.35928 -11.12316 -10.97210 -10.85459 -10.67756 -10.35430 -10.30018 -9.24326 -9.01775 -8.82012 -8.24443 -7.95295 -6.99726 -4.18796 1.13455 1.21919 2.09556 2.88987 3.06797 3.16222 3.24432 3.29126 3.40187 3.46236 3.63919 4.00104 4.29779 4.34500 4.43169 4.52254 4.76128 4.82344 5.02087 5.08619 5.09284 5.25120 5.41026 5.51906 5.58120 5.65945 5.84720 5.92988 5.98056 6.15047 6.31337 6.39580 7.07886 7.51927 7.88837 7.94133 8.21886 8.59070 9.01070 9.43735 10.24081 Molecular weight = 306.06amu Principal moments of inertia in cm(-1) A = 0.017929 B = 0.004380 C = 0.003986 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1561.362053 B = 6391.088136 C = 7023.287204 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.443 5.443 2 C 0.206 3.794 3 C 0.172 3.828 4 N -0.435 5.435 5 C -0.425 4.425 6 H 0.095 0.905 7 C 0.028 3.972 8 N -0.841 5.841 9 Si 1.053 2.947 10 H -0.277 1.277 11 H -0.282 1.282 12 H -0.278 1.278 13 C 0.440 3.560 14 O -0.539 6.539 15 C 0.063 3.937 16 H 0.127 0.873 17 C -0.105 4.105 18 C -0.157 4.157 19 C -0.057 4.057 20 C -0.068 4.068 21 Cl -0.074 7.074 22 C -0.075 4.075 23 C -0.125 4.125 24 C 0.129 3.871 25 O -0.273 6.273 26 H 0.107 0.893 27 H 0.132 0.868 28 H 0.279 0.721 29 H 0.106 0.894 30 H 0.103 0.897 31 H 0.136 0.864 32 H 0.139 0.861 33 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.626 5.208 11.100 13.490 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.122 5.122 2 C -0.113 4.113 3 C 0.044 3.956 4 N -0.158 5.158 5 C -0.551 4.551 6 H 0.113 0.887 7 C -0.184 4.184 8 N -0.472 5.472 9 Si 0.878 3.122 10 H -0.202 1.202 11 H -0.208 1.208 12 H -0.204 1.204 13 C 0.228 3.772 14 O -0.419 6.419 15 C 0.002 3.998 16 H 0.144 0.856 17 C -0.142 4.142 18 C -0.158 4.158 19 C -0.076 4.076 20 C -0.095 4.095 21 Cl -0.045 7.045 22 C -0.094 4.094 23 C -0.144 4.144 24 C 0.083 3.917 25 O -0.185 6.185 26 H 0.124 0.876 27 H 0.150 0.850 28 H 0.090 0.910 29 H 0.125 0.875 30 H 0.121 0.879 31 H 0.154 0.846 32 H 0.157 0.843 33 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges 4.006 4.859 9.651 11.523 hybrid contribution 0.679 -0.212 1.423 1.591 sum 4.685 4.647 11.073 12.890 Atomic orbital electron populations 1.81060 1.13218 1.08221 1.09661 1.30048 0.95850 0.92880 0.92516 1.19428 0.80921 0.88654 1.06594 1.43420 1.55423 1.10752 1.06186 1.20163 1.55459 0.94543 0.84915 0.88725 1.26323 0.94368 0.95830 1.01839 1.70850 1.14518 1.30135 1.31648 0.83743 0.76645 0.76934 0.74888 1.20181 1.20802 1.20405 1.20394 0.83206 0.89206 0.84384 1.90603 1.47779 1.18022 1.85447 1.23420 1.00603 0.89794 0.85938 0.85567 1.21965 0.92141 0.97695 1.02396 1.20561 0.94975 0.97017 1.03242 1.20055 0.90672 0.99647 0.97193 1.20541 0.85910 0.98504 1.04534 1.98349 1.17296 1.91985 1.96889 1.20690 0.94754 0.95108 0.98844 1.20158 0.91113 1.00210 1.02889 1.19730 0.84342 0.92762 0.94836 1.87029 1.19866 1.68157 1.43424 0.87582 0.85027 0.90997 0.87548 0.87863 0.84629 0.84278 0.84491 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.44 -8.84 18.54 42.15 0.78 -8.06 16 2 C 0.21 3.82 15.73 -20.76 -0.33 3.49 16 3 C 0.17 2.98 4.79 -6.83 -0.03 2.95 16 4 N -0.43 -9.53 2.40 -117.94 -0.28 -9.81 16 5 C -0.43 -10.76 8.76 -14.93 -0.13 -10.89 16 6 H 0.10 2.65 7.76 -52.49 -0.41 2.25 16 7 C 0.03 0.67 4.52 -17.47 -0.08 0.59 16 8 N -0.84 -20.29 12.22 55.50 0.68 -19.61 16 9 Si 1.05 22.06 30.06 -169.99 -5.11 16.95 16 10 H -0.28 -5.72 7.11 56.52 0.40 -5.32 16 11 H -0.28 -5.89 7.11 56.52 0.40 -5.49 16 12 H -0.28 -5.75 7.11 56.52 0.40 -5.35 16 13 C 0.44 9.71 6.91 -10.99 -0.08 9.63 16 14 O -0.54 -14.38 16.27 -13.51 -0.22 -14.60 16 15 C 0.06 1.05 3.15 -26.99 -0.09 0.96 16 16 H 0.13 1.80 8.02 -51.93 -0.42 1.39 16 17 C -0.10 -1.40 5.29 -26.52 -0.14 -1.54 16 18 C -0.16 -2.33 6.26 -104.10 -0.65 -2.98 16 19 C -0.06 -0.76 9.82 -39.69 -0.39 -1.15 16 20 C -0.07 -0.88 6.33 -39.45 -0.25 -1.13 16 21 Cl -0.07 -0.85 28.97 -51.86 -1.50 -2.35 16 22 C -0.08 -0.94 9.81 -39.64 -0.39 -1.33 16 23 C -0.12 -1.77 10.06 -39.31 -0.40 -2.17 16 24 C 0.13 2.13 6.87 -38.96 -0.27 1.86 16 25 O -0.27 -4.92 10.46 -40.75 -0.43 -5.34 16 26 H 0.11 1.37 4.47 -51.93 -0.23 1.14 16 27 H 0.13 2.41 5.74 -51.93 -0.30 2.11 16 28 H 0.28 6.62 8.12 -40.82 -0.33 6.28 16 29 H 0.11 1.41 6.40 -51.93 -0.33 1.07 16 30 H 0.10 1.00 8.14 -51.93 -0.42 0.58 16 31 H 0.14 1.53 8.06 -52.48 -0.42 1.11 16 32 H 0.14 1.36 8.06 -52.49 -0.42 0.93 16 33 H 0.14 1.70 8.06 -52.49 -0.42 1.28 16 LS Contribution 311.37 15.07 4.69 4.69 Total: -1.00 -30.73 311.37 -7.11 -37.84 By element: Atomic # 1 Polarization: 4.49 SS G_CDS: -2.50 Total: 1.99 kcal Atomic # 6 Polarization: 1.51 SS G_CDS: -3.21 Total: -1.70 kcal Atomic # 7 Polarization: -38.65 SS G_CDS: 1.18 Total: -37.48 kcal Atomic # 8 Polarization: -19.30 SS G_CDS: -0.65 Total: -19.94 kcal Atomic # 14 Polarization: 22.06 SS G_CDS: -5.11 Total: 16.95 kcal Atomic # 17 Polarization: -0.85 SS G_CDS: -1.50 Total: -2.35 kcal Total LS contribution 4.69 Total: 4.69 kcal Total: -30.73 -7.11 -37.84 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000065595880.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 38.732 kcal (2) G-P(sol) polarization free energy of solvation -30.731 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 8.001 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.107 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.838 kcal (6) G-S(sol) free energy of system = (1) + (5) 0.894 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds