Wall clock time and date at job start Fri Apr 10 2020 17:54:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35799 * 117.00524 * 2 1 4 4 C 1.39632 * 119.30500 * 359.97438 * 3 2 1 5 5 C 1.35998 * 121.53774 * 179.97438 * 4 3 2 6 6 C 1.40837 * 119.64241 * 0.02562 * 5 4 3 7 7 C 1.39754 * 121.73945 * 180.02562 * 6 5 4 8 8 C 1.40084 * 119.17273 * 179.22207 * 7 6 5 9 9 C 1.41092 * 119.55098 * 180.23630 * 8 7 6 10 10 H 1.07999 * 119.99633 * 330.29532 * 9 8 7 11 11 C 1.39910 * 120.00198 * 150.29246 * 9 8 7 12 12 N 1.30862 * 119.99809 * 161.68174 * 11 9 8 13 13 Si 1.86795 * 120.00208 * 341.67984 * 11 9 8 14 14 H 1.48502 * 109.47093 * 95.42633 * 13 11 9 15 15 H 1.48501 * 109.47536 * 215.42343 * 13 11 9 16 16 H 1.48500 * 109.47216 * 335.42605 * 13 11 9 17 17 C 1.41379 * 120.89698 * 0.72367 * 8 7 6 18 18 C 1.35279 * 121.39221 * 359.53306 * 17 8 7 19 19 C 1.41073 * 119.97087 * 359.97438 * 18 17 8 20 20 C 1.38132 * 119.31108 * 180.02562 * 3 2 1 21 21 Br 1.89103 * 120.30431 * 359.97438 * 20 3 2 22 22 H 1.08997 * 109.47494 * 180.02562 * 1 2 3 23 23 H 1.09000 * 109.46709 * 300.00212 * 1 2 3 24 24 H 1.09003 * 109.46663 * 59.99671 * 1 2 3 25 25 H 1.08008 * 119.23474 * 0.02562 * 4 3 2 26 26 H 1.07997 * 120.18194 * 179.97438 * 5 4 3 27 27 H 1.08003 * 120.41104 * 359.97438 * 7 6 5 28 28 H 0.96998 * 119.99729 * 180.02562 * 12 11 9 29 29 H 1.08001 * 119.29946 * 179.51499 * 17 8 7 30 30 H 1.08003 * 120.01161 * 179.97438 * 18 17 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0456 1.2099 0.0000 4 6 1.2711 2.3717 -0.0005 5 6 1.8410 3.6066 0.0000 6 6 3.2442 3.7261 0.0005 7 6 3.8759 4.9728 0.0015 8 6 5.2755 5.0291 0.0186 9 6 5.9214 6.2835 0.0249 10 1 5.4520 7.1348 -0.4455 11 6 7.1698 6.4245 0.6405 12 7 7.9288 7.4511 0.3532 13 14 7.7533 5.1474 1.8725 14 1 8.6116 4.1506 1.1833 15 1 8.5335 5.8147 2.9454 16 1 6.5786 4.4614 2.4683 17 6 6.0497 3.8462 0.0194 18 6 5.4694 2.6242 0.0131 19 6 4.0631 2.5119 0.0062 20 6 3.4258 1.2655 -0.0005 21 35 4.4450 -0.3274 -0.0005 22 1 -0.3634 -1.0276 0.0005 23 1 -0.3633 0.5139 0.8900 24 1 -0.3633 0.5139 -0.8900 25 1 0.1943 2.2878 -0.0005 26 1 1.2208 4.4907 -0.0009 27 1 3.2921 5.8814 0.0015 28 1 8.7945 7.5486 0.7798 29 1 7.1272 3.9197 0.0248 30 1 6.0824 1.7350 0.0135 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000072226982.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 17:54:20 Heat of formation + Delta-G solvation = -1.122446 kcal Electronic energy + Delta-G solvation = -16600.223200 eV Core-core repulsion = 13792.544481 eV Total energy + Delta-G solvation = -2807.678719 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 306.000 amu Computer time = 0.26 seconds Orbital eigenvalues (eV) -39.68328 -38.06234 -35.33718 -33.33722 -32.53370 -30.05264 -29.49026 -28.48342 -26.91525 -25.02792 -22.47025 -21.40631 -20.61704 -18.29249 -17.53216 -16.49257 -15.69984 -15.45952 -15.20905 -14.50769 -13.91482 -13.72196 -13.05430 -12.89051 -12.78021 -12.51305 -12.20502 -12.04324 -11.65949 -11.16912 -10.98160 -10.85181 -10.51164 -10.37089 -10.19944 -9.84812 -9.83103 -9.50434 -9.29843 -8.62655 -7.58478 -7.18377 -7.00488 -4.58461 1.15815 1.84985 2.23787 2.78034 2.97450 3.13626 3.16020 3.58515 3.64116 3.79843 4.46095 5.11948 5.21767 5.26230 5.27770 5.45214 5.55534 5.62028 5.88721 6.03816 6.13732 6.24620 6.44341 6.65715 6.72570 6.76806 6.95358 7.21949 7.27487 7.42923 7.59843 7.77675 7.88282 8.09759 8.40694 8.55218 9.82843 Molecular weight = 306.00amu Principal moments of inertia in cm(-1) A = 0.022411 B = 0.005684 C = 0.004699 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1249.074527 B = 4924.949792 C = 5957.289865 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.031 3.969 2 O -0.314 6.314 3 C 0.081 3.919 4 C -0.180 4.180 5 C -0.095 4.095 6 C -0.010 4.010 7 C -0.237 4.237 8 C 0.086 3.914 9 C -0.429 4.429 10 H 0.096 0.904 11 C 0.081 3.919 12 N -0.792 5.792 13 Si 0.904 3.096 14 H -0.265 1.265 15 H -0.284 1.284 16 H -0.241 1.241 17 C -0.159 4.159 18 C -0.095 4.095 19 C -0.092 4.092 20 C -0.079 4.079 21 Br -0.064 7.064 22 H 0.092 0.908 23 H 0.049 0.951 24 H 0.050 0.950 25 H 0.120 0.880 26 H 0.122 0.878 27 H 0.110 0.890 28 H 0.289 0.711 29 H 0.108 0.892 30 H 0.115 0.885 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.117 -11.294 0.635 13.922 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.064 4.064 2 O -0.228 6.228 3 C 0.035 3.965 4 C -0.199 4.199 5 C -0.113 4.113 6 C -0.011 4.011 7 C -0.257 4.257 8 C 0.083 3.917 9 C -0.457 4.457 10 H 0.114 0.886 11 C -0.140 4.140 12 N -0.415 5.415 13 Si 0.729 3.271 14 H -0.191 1.191 15 H -0.210 1.210 16 H -0.164 1.164 17 C -0.178 4.178 18 C -0.113 4.113 19 C -0.095 4.095 20 C -0.159 4.159 21 Br 0.021 6.979 22 H 0.110 0.890 23 H 0.068 0.932 24 H 0.068 0.932 25 H 0.138 0.862 26 H 0.140 0.860 27 H 0.128 0.872 28 H 0.100 0.900 29 H 0.126 0.874 30 H 0.133 0.867 Dipole moment (debyes) X Y Z Total from point charges -7.407 -11.862 0.643 14.000 hybrid contribution -0.073 0.154 0.476 0.506 sum -7.480 -11.708 1.119 13.939 Atomic orbital electron populations 1.22914 0.79624 1.03021 1.00852 1.86078 1.20213 1.26828 1.89697 1.18168 0.90227 0.84300 1.03831 1.20582 0.98864 0.92125 1.08311 1.20813 0.94049 0.96389 1.00089 1.18729 0.91694 0.92528 0.98146 1.20819 0.93643 0.94257 1.17011 1.17660 0.92081 0.92452 0.89519 1.19594 1.00391 0.96187 1.29493 0.88594 1.26256 0.95045 0.96220 0.96472 1.69695 1.09266 1.28040 1.34489 0.86444 0.80385 0.80268 0.80000 1.19072 1.21034 1.16407 1.21046 0.99103 0.92913 1.04696 1.20672 0.92802 0.97466 1.00357 1.18124 0.93136 0.89643 1.08558 1.20757 0.90467 0.90774 1.13869 1.96476 1.71756 1.31783 1.97879 0.88966 0.93190 0.93172 0.86237 0.85981 0.87200 0.89986 0.87430 0.86696 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.35 9.79 101.05 0.99 1.34 16 2 O -0.31 -5.05 9.76 -19.11 -0.19 -5.23 16 3 C 0.08 1.47 6.67 -39.10 -0.26 1.21 16 4 C -0.18 -2.96 8.90 -39.87 -0.35 -3.32 16 5 C -0.09 -1.69 9.80 -39.40 -0.39 -2.08 16 6 C -0.01 -0.21 5.87 -105.04 -0.62 -0.82 16 7 C -0.24 -5.34 9.56 -38.32 -0.37 -5.71 16 8 C 0.09 2.08 5.09 -106.93 -0.54 1.53 16 9 C -0.43 -10.90 9.51 -37.87 -0.36 -11.26 16 10 H 0.10 2.54 8.06 -52.49 -0.42 2.11 16 11 C 0.08 1.99 5.38 -17.34 -0.09 1.90 16 12 N -0.79 -19.81 13.93 55.55 0.77 -19.04 16 13 Si 0.90 19.43 24.49 -169.99 -4.16 15.27 16 14 H -0.26 -5.48 6.70 56.52 0.38 -5.10 16 15 H -0.28 -5.87 7.11 56.52 0.40 -5.47 16 16 H -0.24 -5.37 6.88 56.52 0.39 -4.98 16 17 C -0.16 -3.65 6.98 -39.44 -0.28 -3.93 16 18 C -0.09 -2.04 9.38 -39.56 -0.37 -2.41 16 19 C -0.09 -1.98 5.88 -104.86 -0.62 -2.60 16 20 C -0.08 -1.56 6.27 -38.97 -0.24 -1.81 16 21 Br -0.06 -1.12 31.48 -68.01 -2.14 -3.26 16 22 H 0.09 0.79 8.14 -51.93 -0.42 0.37 16 23 H 0.05 0.50 7.61 -51.93 -0.40 0.11 16 24 H 0.05 0.50 7.61 -51.93 -0.40 0.11 16 25 H 0.12 1.56 6.14 -52.48 -0.32 1.24 16 26 H 0.12 1.86 8.06 -52.49 -0.42 1.44 16 27 H 0.11 2.32 8.06 -52.48 -0.42 1.89 16 28 H 0.29 6.52 8.30 -40.82 -0.34 6.18 16 29 H 0.11 2.41 4.67 -52.49 -0.25 2.16 16 30 H 0.12 2.26 6.76 -52.48 -0.35 1.91 16 LS Contribution 272.85 15.07 4.11 4.11 Total: -1.00 -26.46 272.85 -7.68 -34.14 By element: Atomic # 1 Polarization: 4.55 SS G_CDS: -2.57 Total: 1.98 kcal Atomic # 6 Polarization: -24.46 SS G_CDS: -3.50 Total: -27.96 kcal Atomic # 7 Polarization: -19.81 SS G_CDS: 0.77 Total: -19.04 kcal Atomic # 8 Polarization: -5.05 SS G_CDS: -0.19 Total: -5.23 kcal Atomic # 14 Polarization: 19.43 SS G_CDS: -4.16 Total: 15.27 kcal Atomic # 35 Polarization: -1.12 SS G_CDS: -2.14 Total: -3.26 kcal Total LS contribution 4.11 Total: 4.11 kcal Total: -26.46 -7.68 -34.14 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000072226982.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 33.017 kcal (2) G-P(sol) polarization free energy of solvation -26.459 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 6.558 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.681 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.140 kcal (6) G-S(sol) free energy of system = (1) + (5) -1.122 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.27 seconds