Wall clock time and date at job start Fri Apr 10 2020 17:54:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.53006 * 109.47029 * 2 1 4 4 H 1.08997 * 109.47061 * 304.99720 * 3 2 1 5 5 N 1.46502 * 109.47066 * 64.99738 * 3 2 1 6 6 C 1.34773 * 120.00145 * 274.99857 * 5 3 2 7 7 O 1.21278 * 120.00009 * 0.02562 * 6 5 3 8 8 C 1.50701 * 119.99901 * 179.97438 * 6 5 3 9 9 C 1.50695 * 109.46921 * 179.97438 * 8 6 5 10 10 C 1.38327 * 119.96983 * 269.72858 * 9 8 6 11 11 C 1.38277 * 120.13704 * 179.76844 * 10 9 8 12 12 C 1.38122 * 120.07087 * 0.50874 * 11 10 9 13 13 C 1.38854 * 119.93061 * 359.74085 * 12 11 10 14 14 O 1.35754 * 120.06973 * 179.97438 * 13 12 11 15 15 C 1.34831 * 116.99655 * 354.49322 * 14 13 12 16 16 H 1.07998 * 120.00346 * 5.05077 * 15 14 13 17 17 C 1.38658 * 119.99588 * 185.06179 * 15 14 13 18 18 N 1.31558 * 120.00215 * 359.97438 * 17 15 14 19 19 Si 1.86800 * 119.99808 * 180.02562 * 17 15 14 20 20 H 1.48494 * 109.47598 * 89.99446 * 19 17 15 21 21 H 1.48499 * 109.47129 * 209.99565 * 19 17 15 22 22 H 1.48500 * 109.46912 * 329.99218 * 19 17 15 23 23 C 1.38083 * 119.96439 * 90.00332 * 9 8 6 24 24 C 1.50698 * 109.47046 * 184.99834 * 3 2 1 25 25 N 1.34778 * 119.99851 * 60.27337 * 24 3 2 26 26 O 1.21280 * 120.00075 * 239.99787 * 24 3 2 27 27 H 1.09005 * 109.47522 * 300.00043 * 1 2 3 28 28 H 1.09001 * 109.47099 * 60.00209 * 1 2 3 29 29 H 1.09001 * 109.47206 * 180.02562 * 1 2 3 30 30 H 1.08996 * 109.47218 * 239.99921 * 2 1 3 31 31 H 1.09001 * 109.47099 * 119.99791 * 2 1 3 32 32 H 0.97001 * 119.99409 * 95.00453 * 5 3 2 33 33 H 1.08993 * 109.47291 * 300.00088 * 8 6 5 34 34 H 1.09006 * 109.47031 * 60.00530 * 8 6 5 35 35 H 1.08000 * 119.92845 * 359.97438 * 10 9 8 36 36 H 1.08001 * 119.96414 * 180.24698 * 11 10 9 37 37 H 1.08002 * 120.03231 * 179.72642 * 12 11 10 38 38 H 0.97000 * 120.00032 * 180.02562 * 18 17 15 39 39 H 1.08004 * 120.03242 * 359.95275 * 23 9 8 40 40 H 0.97007 * 119.99814 * 179.72661 * 25 24 3 41 41 H 0.97004 * 120.00040 * 359.72435 * 25 24 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4426 0.0000 4 1 1.6054 1.9816 -0.8418 5 7 1.6523 2.0976 1.2518 6 6 0.4351 2.6645 1.3669 7 8 -0.3396 2.6320 0.4344 8 6 0.0361 3.3377 2.6548 9 6 -1.3612 3.8863 2.5230 10 6 -1.5566 5.1764 2.0638 11 6 -2.8375 5.6816 1.9369 12 6 -3.9257 4.9026 2.2785 13 6 -3.7327 3.6090 2.7446 14 8 -4.8002 2.8410 3.0816 15 6 -6.0125 3.4302 3.0497 16 1 -6.1115 4.4428 2.6873 17 6 -7.1322 2.7362 3.4823 18 7 -7.0118 1.5027 3.9235 19 14 -8.8120 3.5523 3.4374 20 1 -9.4580 3.2837 2.1276 21 1 -9.6578 3.0044 4.5281 22 1 -8.6554 5.0175 3.6210 23 6 -2.4450 3.1025 2.8660 24 6 3.5419 1.4444 -0.1238 25 7 4.1295 0.8961 -1.2057 26 8 4.2216 1.9436 0.7478 27 1 -0.3634 0.5138 0.8900 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3634 -1.0277 0.0005 30 1 1.8933 -0.5138 -0.8899 31 1 1.8933 -0.5138 0.8900 32 1 2.2719 2.1232 1.9977 33 1 0.0671 2.6131 3.4684 34 1 0.7275 4.1531 2.8679 35 1 -0.7071 5.7892 1.8007 36 1 -2.9870 6.6879 1.5743 37 1 -4.9257 5.2994 2.1833 38 1 -7.7952 1.0171 4.2258 39 1 -2.2917 2.0965 3.2280 40 1 5.0961 0.9008 -1.2873 41 1 3.5858 0.4967 -1.9028 RHF calculation, no. of doubly occupied orbitals= 57 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000291457551.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 17:54:45 Heat of formation + Delta-G solvation = -83.954902 kcal Electronic energy + Delta-G solvation = -24564.741554 eV Core-core repulsion = 20831.148412 eV Total energy + Delta-G solvation = -3733.593143 eV No. of doubly occupied orbitals = 57 Molecular weight (most abundant/longest-lived isotopes) = 306.141 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -40.65276 -39.38726 -38.65116 -36.50885 -35.38933 -34.17577 -32.65343 -32.22242 -31.60175 -29.15832 -28.04591 -26.47832 -25.15632 -22.49971 -21.74806 -21.39165 -20.51611 -20.22015 -18.36321 -17.55944 -17.42389 -16.88780 -16.29566 -16.02959 -15.61779 -15.08322 -14.84840 -14.48514 -14.35516 -14.28834 -13.86676 -13.57837 -13.40619 -13.18143 -12.68216 -12.48287 -12.35965 -12.22666 -11.77510 -11.63413 -11.45623 -11.21789 -11.00982 -10.77526 -10.72892 -10.55604 -10.40576 -10.32357 -10.15790 -9.71537 -9.27546 -9.12952 -8.78083 -7.99764 -7.14989 -6.38693 -3.97527 2.14109 2.16109 2.46037 2.72990 2.87218 3.16738 3.17303 3.22124 3.38029 4.01673 4.34404 4.59605 4.65574 4.78437 4.95109 5.05360 5.16865 5.20993 5.31227 5.41378 5.56701 5.59171 5.74696 5.82275 5.87959 6.00454 6.02360 6.24111 6.24471 6.33024 6.40543 6.44830 6.72723 6.83483 6.98714 7.13769 7.33861 7.43488 7.47757 7.50980 7.76836 7.89871 8.06648 8.32066 9.07287 9.78779 10.79700 Molecular weight = 306.14amu Principal moments of inertia in cm(-1) A = 0.025099 B = 0.002881 C = 0.002693 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1115.309483 B = 9715.344652 C =10395.365786 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C -0.127 4.127 3 C 0.127 3.873 4 H 0.116 0.884 5 N -0.722 5.722 6 C 0.518 3.482 7 O -0.513 6.513 8 C -0.093 4.093 9 C -0.032 4.032 10 C -0.196 4.196 11 C -0.075 4.075 12 C -0.231 4.231 13 C 0.155 3.845 14 O -0.180 6.180 15 C -0.390 4.390 16 H 0.091 0.909 17 C 0.038 3.962 18 N -0.865 5.865 19 Si 0.940 3.060 20 H -0.274 1.274 21 H -0.278 1.278 22 H -0.268 1.268 23 C -0.173 4.173 24 C 0.517 3.483 25 N -0.850 5.850 26 O -0.539 6.539 27 H 0.065 0.935 28 H 0.063 0.937 29 H 0.051 0.949 30 H 0.071 0.929 31 H 0.069 0.931 32 H 0.408 0.592 33 H 0.100 0.900 34 H 0.099 0.901 35 H 0.102 0.898 36 H 0.106 0.894 37 H 0.126 0.874 38 H 0.269 0.731 39 H 0.113 0.887 40 H 0.404 0.596 41 H 0.404 0.596 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 19.448 -1.314 -8.151 21.128 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.166 4.166 3 C 0.018 3.982 4 H 0.133 0.867 5 N -0.378 5.378 6 C 0.305 3.695 7 O -0.387 6.387 8 C -0.133 4.133 9 C -0.032 4.032 10 C -0.215 4.215 11 C -0.093 4.093 12 C -0.250 4.250 13 C 0.102 3.898 14 O -0.084 6.084 15 C -0.466 4.466 16 H 0.108 0.892 17 C -0.165 4.165 18 N -0.500 5.500 19 Si 0.765 3.235 20 H -0.199 1.199 21 H -0.203 1.203 22 H -0.192 1.192 23 C -0.193 4.193 24 C 0.301 3.699 25 N -0.414 5.414 26 O -0.415 6.415 27 H 0.084 0.916 28 H 0.083 0.917 29 H 0.070 0.930 30 H 0.090 0.910 31 H 0.088 0.912 32 H 0.244 0.756 33 H 0.118 0.882 34 H 0.118 0.882 35 H 0.120 0.880 36 H 0.125 0.875 37 H 0.143 0.857 38 H 0.079 0.921 39 H 0.131 0.869 40 H 0.235 0.765 41 H 0.233 0.767 Dipole moment (debyes) X Y Z Total from point charges 18.955 -1.380 -8.002 20.621 hybrid contribution -0.350 0.224 -0.196 0.460 sum 18.605 -1.156 -8.198 20.364 Atomic orbital electron populations 1.21825 0.93195 1.01391 1.04065 1.21936 0.98519 0.93631 1.02555 1.20822 0.90422 0.96051 0.90935 0.86681 1.45795 1.17524 1.58900 1.15580 1.20725 0.80610 0.77773 0.90394 1.90762 1.50458 1.57201 1.40262 1.20579 0.96212 1.01101 0.95424 1.18645 0.91760 0.93876 0.98952 1.20355 0.96365 0.95904 1.08857 1.20673 0.92403 0.98295 0.97944 1.21172 0.99420 0.95619 1.08815 1.19271 0.88491 0.89861 0.92224 1.83977 1.13043 1.36087 1.75300 1.21310 0.81324 0.99778 1.44216 0.89160 1.25264 0.99232 0.95831 0.96215 1.70041 1.30608 1.09676 1.39722 0.85729 0.80466 0.79052 0.78277 1.19942 1.20315 1.19240 1.19935 0.89727 1.00275 1.09345 1.20727 0.90711 0.76798 0.81634 1.43788 1.11696 1.62420 1.23544 1.90748 1.65493 1.44997 1.40265 0.91622 0.91749 0.92954 0.91013 0.91224 0.75567 0.88153 0.88247 0.87957 0.87541 0.85672 0.92140 0.86864 0.76486 0.76670 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.75 8.51 37.16 0.32 -1.43 16 2 C -0.13 -1.09 5.55 -26.73 -0.15 -1.24 16 3 C 0.13 1.21 2.67 -69.08 -0.18 1.02 16 4 H 0.12 1.16 7.58 -51.93 -0.39 0.77 16 5 N -0.72 -7.98 4.90 -54.93 -0.27 -8.25 16 6 C 0.52 7.30 6.39 -10.99 -0.07 7.23 16 7 O -0.51 -9.10 13.17 5.56 0.07 -9.03 16 8 C -0.09 -1.26 5.83 -29.04 -0.17 -1.43 16 9 C -0.03 -0.58 4.37 -104.65 -0.46 -1.04 16 10 C -0.20 -3.57 9.70 -39.53 -0.38 -3.96 16 11 C -0.07 -1.45 10.04 -39.61 -0.40 -1.85 16 12 C -0.23 -5.25 9.17 -39.40 -0.36 -5.61 16 13 C 0.15 3.88 6.65 -39.11 -0.26 3.62 16 14 O -0.18 -5.28 9.76 0.04 0.00 -5.28 16 15 C -0.39 -11.15 9.49 30.89 0.29 -10.86 16 16 H 0.09 2.40 5.20 -52.49 -0.27 2.13 16 17 C 0.04 1.07 5.49 -17.51 -0.10 0.98 16 18 N -0.87 -25.78 13.67 55.48 0.76 -25.03 16 19 Si 0.94 20.92 29.55 -169.99 -5.02 15.89 16 20 H -0.27 -5.95 7.11 56.52 0.40 -5.55 16 21 H -0.28 -6.04 7.11 56.52 0.40 -5.64 16 22 H -0.27 -5.73 7.11 56.52 0.40 -5.33 16 23 C -0.17 -3.79 9.65 -39.39 -0.38 -4.17 16 24 C 0.52 4.62 7.49 -10.99 -0.08 4.54 16 25 N -0.85 -4.10 8.74 31.22 0.27 -3.83 16 26 O -0.54 -6.74 16.67 5.56 0.09 -6.65 16 27 H 0.06 0.96 5.65 -51.93 -0.29 0.67 16 28 H 0.06 0.83 7.85 -51.93 -0.41 0.42 16 29 H 0.05 0.57 8.14 -51.93 -0.42 0.15 16 30 H 0.07 0.41 7.44 -51.93 -0.39 0.03 16 31 H 0.07 0.60 8.14 -51.93 -0.42 0.17 16 32 H 0.41 4.04 7.79 -40.82 -0.32 3.72 16 33 H 0.10 1.17 8.08 -51.93 -0.42 0.75 16 34 H 0.10 1.09 8.08 -51.93 -0.42 0.67 16 35 H 0.10 1.60 8.06 -52.49 -0.42 1.17 16 36 H 0.11 1.75 8.06 -52.49 -0.42 1.32 16 37 H 0.13 2.83 5.64 -52.49 -0.30 2.54 16 38 H 0.27 7.34 8.31 -40.82 -0.34 7.00 16 39 H 0.11 2.40 8.06 -52.48 -0.42 1.98 16 40 H 0.40 1.52 8.93 -40.82 -0.36 1.15 16 41 H 0.40 0.92 8.20 -40.82 -0.33 0.59 16 LS Contribution 347.99 15.07 5.24 5.24 Total: -1.00 -36.04 347.99 -6.39 -42.43 By element: Atomic # 1 Polarization: 13.86 SS G_CDS: -5.15 Total: 8.71 kcal Atomic # 6 Polarization: -11.83 SS G_CDS: -2.38 Total: -14.21 kcal Atomic # 7 Polarization: -37.87 SS G_CDS: 0.76 Total: -37.11 kcal Atomic # 8 Polarization: -21.12 SS G_CDS: 0.17 Total: -20.96 kcal Atomic # 14 Polarization: 20.92 SS G_CDS: -5.02 Total: 15.89 kcal Total LS contribution 5.24 Total: 5.24 kcal Total: -36.04 -6.39 -42.43 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000291457551.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -41.528 kcal (2) G-P(sol) polarization free energy of solvation -36.040 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -77.568 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.386 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.427 kcal (6) G-S(sol) free energy of system = (1) + (5) -83.955 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds