Wall clock time and date at job start Fri Apr 10 2020 17:58:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.46764 * 124.34448 * 2 1 4 4 C 1.54479 * 105.53253 * 163.21206 * 3 2 1 5 5 C 1.54629 * 101.76722 * 25.21078 * 4 3 2 6 6 H 1.08996 * 110.48482 * 216.52452 * 5 4 3 7 7 C 1.50694 * 110.49087 * 93.87849 * 5 4 3 8 8 O 1.21287 * 119.99667 * 3.76877 * 7 5 4 9 9 N 1.34777 * 120.00497 * 183.77608 * 7 5 4 10 10 C 1.46497 * 120.00105 * 179.97438 * 9 7 5 11 11 H 1.08997 * 110.56307 * 32.95052 * 10 9 7 12 12 C 1.54851 * 110.62272 * 155.84850 * 10 9 7 13 13 C 1.55853 * 103.44138 * 118.49035 * 12 10 9 14 14 H 1.09001 * 115.55702 * 159.56836 * 13 12 10 15 15 C 1.55845 * 105.06279 * 288.17065 * 13 12 10 16 16 C 1.54861 * 103.44234 * 71.82965 * 15 13 12 17 17 C 1.55840 * 110.62469 * 270.04802 * 10 9 7 18 18 H 1.09005 * 115.56202 * 81.95115 * 17 10 9 19 19 N 1.50230 * 101.05104 * 32.93708 * 13 12 10 20 20 C 1.36938 * 130.83685 * 126.02933 * 19 13 12 21 21 H 1.08008 * 119.99751 * 180.02562 * 20 19 13 22 22 C 1.38813 * 120.00364 * 0.02766 * 20 19 13 23 23 N 1.31618 * 119.99542 * 359.97438 * 22 20 19 24 24 Si 1.86797 * 120.00181 * 179.97438 * 22 20 19 25 25 H 1.48503 * 109.47352 * 359.97438 * 24 22 20 26 26 H 1.48505 * 109.47279 * 119.99817 * 24 22 20 27 27 H 1.48492 * 109.47050 * 239.99517 * 24 22 20 28 28 C 1.34417 * 124.35387 * 179.82557 * 2 1 3 29 29 O 1.21277 * 124.94168 * 0.43244 * 28 2 1 30 30 H 1.09004 * 109.46840 * 180.19650 * 1 2 3 31 31 H 1.08998 * 109.47289 * 300.19305 * 1 2 3 32 32 H 1.08996 * 109.47304 * 60.20263 * 1 2 3 33 33 H 1.08996 * 110.39119 * 44.10437 * 3 2 1 34 34 H 1.09003 * 110.11423 * 282.17983 * 3 2 1 35 35 H 1.08998 * 110.97291 * 267.08774 * 4 3 2 36 36 H 1.09001 * 111.00266 * 143.34177 * 4 3 2 37 37 H 0.97001 * 119.99359 * 359.97438 * 9 7 5 38 38 H 1.08993 * 110.63098 * 236.97454 * 12 10 9 39 39 H 1.09000 * 110.62960 * 0.02562 * 12 10 9 40 40 H 1.09000 * 110.62505 * 190.31651 * 15 13 12 41 41 H 1.08993 * 110.63197 * 313.33788 * 15 13 12 42 42 H 1.09001 * 110.62488 * 118.48520 * 16 15 13 43 43 H 1.08997 * 110.62234 * 241.35046 * 16 15 13 44 44 H 0.97001 * 119.99609 * 180.02562 * 23 22 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2930 1.2118 0.0000 4 6 3.7029 0.7494 0.4299 5 6 3.6899 -0.7376 0.0063 6 1 4.2361 -1.3447 0.7282 7 6 4.2776 -0.8987 -1.3720 8 8 4.7389 0.0623 -1.9505 9 7 4.2905 -2.1105 -1.9618 10 6 4.8614 -2.2668 -3.3019 11 1 5.6910 -1.5750 -3.4477 12 6 5.3222 -3.7272 -3.5315 13 6 4.4445 -4.2000 -4.7295 14 1 4.8257 -5.0591 -5.2814 15 6 3.0100 -4.3608 -4.1420 16 6 2.5492 -2.9002 -3.9124 17 6 3.7691 -2.0517 -4.3924 18 1 3.5548 -1.0132 -4.6451 19 7 4.2977 -2.9197 -5.5017 20 6 4.5645 -2.6294 -6.8131 21 1 4.3918 -1.6326 -7.1914 22 6 5.0569 -3.6161 -7.6562 23 7 5.2678 -4.8306 -7.1950 24 14 5.4201 -3.2202 -9.4452 25 1 5.0995 -1.7949 -9.7118 26 1 6.8580 -3.4652 -9.7244 27 1 4.5913 -4.0858 -10.3219 28 6 2.2235 -1.1097 0.0034 29 8 1.7948 -2.2441 -0.0007 30 1 -0.3633 -1.0277 0.0035 31 1 -0.3634 0.5168 0.8882 32 1 -0.3634 0.5107 -0.8917 33 1 1.9015 1.9392 0.7110 34 1 2.3262 1.6431 -1.0005 35 1 3.8337 0.8469 1.5076 36 1 4.4752 1.3010 -0.1062 37 1 3.9218 -2.8790 -1.4989 38 1 6.3796 -3.7595 -3.7939 39 1 5.1256 -4.3352 -2.6484 40 1 2.3566 -4.8618 -4.8562 41 1 3.0402 -4.9066 -3.1991 42 1 1.6673 -2.6770 -4.5128 43 1 2.3482 -2.7227 -2.8560 44 1 5.6123 -5.5200 -7.7841 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001095889277.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 17:58:04 Heat of formation + Delta-G solvation = -13.459785 kcal Electronic energy + Delta-G solvation = -26803.772854 eV Core-core repulsion = 23143.643792 eV Total energy + Delta-G solvation = -3660.129062 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 307.168 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -41.12129 -39.57540 -38.16668 -36.52768 -33.91711 -33.01908 -32.27142 -29.36817 -29.03553 -28.39195 -27.19871 -26.87403 -24.22455 -22.83201 -21.25984 -20.75642 -19.80904 -19.38460 -18.50837 -17.79981 -17.05025 -16.80825 -15.91800 -15.77642 -15.24200 -14.85614 -14.63945 -14.27614 -13.97261 -13.90606 -13.66626 -13.39476 -13.01974 -12.81025 -12.47520 -12.30519 -12.20467 -11.75833 -11.66649 -11.47406 -11.40753 -11.00957 -10.89282 -10.85826 -10.81334 -10.18171 -10.13861 -10.04124 -9.82778 -9.69440 -9.33304 -9.20500 -8.95754 -8.90591 -8.50297 -6.88664 -5.70463 -3.08225 2.19889 2.63038 2.90648 3.39405 3.42662 3.47148 3.48992 4.04778 4.20006 4.46429 4.57514 4.80245 4.94033 5.04545 5.13225 5.24651 5.26338 5.32247 5.40862 5.49238 5.59505 5.62992 5.80568 5.82372 5.87346 6.03273 6.11318 6.18991 6.22429 6.34582 6.39403 6.58035 6.68323 6.71145 6.80145 6.83147 6.99808 7.03812 7.31113 7.54916 7.73287 7.84043 7.90957 8.17988 8.40132 9.12793 9.75052 10.55962 11.39389 Molecular weight = 307.17amu Principal moments of inertia in cm(-1) A = 0.024067 B = 0.003843 C = 0.003770 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1163.145850 B = 7284.474633 C = 7425.830340 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.094 3.906 2 N -0.620 5.620 3 C 0.101 3.899 4 C -0.118 4.118 5 C -0.151 4.151 6 H 0.131 0.869 7 C 0.526 3.474 8 O -0.535 6.535 9 N -0.702 5.702 10 C 0.126 3.874 11 H 0.085 0.915 12 C -0.142 4.142 13 C 0.157 3.843 14 H 0.153 0.847 15 C -0.137 4.137 16 C -0.131 4.131 17 C 0.128 3.872 18 H 0.084 0.916 19 N -0.589 5.589 20 C -0.210 4.210 21 H 0.079 0.921 22 C -0.012 4.012 23 N -0.923 5.923 24 Si 0.916 3.084 25 H -0.281 1.281 26 H -0.291 1.291 27 H -0.291 1.291 28 C 0.528 3.472 29 O -0.519 6.519 30 H 0.084 0.916 31 H 0.061 0.939 32 H 0.063 0.937 33 H 0.081 0.919 34 H 0.078 0.922 35 H 0.087 0.913 36 H 0.111 0.889 37 H 0.402 0.598 38 H 0.066 0.934 39 H 0.055 0.945 40 H 0.054 0.946 41 H 0.046 0.954 42 H 0.048 0.952 43 H 0.053 0.947 44 H 0.253 0.747 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.822 8.904 18.085 20.982 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.048 4.048 2 N -0.354 5.354 3 C -0.022 4.022 4 C -0.156 4.156 5 C -0.176 4.176 6 H 0.148 0.852 7 C 0.309 3.691 8 O -0.413 6.413 9 N -0.352 5.352 10 C 0.020 3.980 11 H 0.103 0.897 12 C -0.182 4.182 13 C 0.051 3.949 14 H 0.170 0.830 15 C -0.176 4.176 16 C -0.170 4.170 17 C 0.020 3.980 18 H 0.102 0.898 19 N -0.310 5.310 20 C -0.338 4.338 21 H 0.097 0.903 22 C -0.208 4.208 23 N -0.571 5.571 24 Si 0.747 3.253 25 H -0.206 1.206 26 H -0.218 1.218 27 H -0.218 1.218 28 C 0.314 3.686 29 O -0.395 6.395 30 H 0.102 0.898 31 H 0.080 0.920 32 H 0.082 0.918 33 H 0.099 0.901 34 H 0.096 0.904 35 H 0.106 0.894 36 H 0.130 0.870 37 H 0.237 0.763 38 H 0.085 0.915 39 H 0.074 0.926 40 H 0.073 0.927 41 H 0.065 0.935 42 H 0.067 0.933 43 H 0.071 0.929 44 H 0.064 0.936 Dipole moment (debyes) X Y Z Total from point charges -5.708 8.915 17.303 20.285 hybrid contribution -0.121 -0.083 -0.551 0.570 sum -5.829 8.833 16.753 19.815 Atomic orbital electron populations 1.21586 0.77662 1.03975 1.01590 1.48086 1.06711 1.07365 1.73277 1.22154 0.90229 0.87132 1.02648 1.22585 0.97745 0.92986 1.02287 1.22190 0.95805 1.00987 0.98621 0.85174 1.19627 0.79546 0.83832 0.86084 1.90695 1.47147 1.38718 1.64702 1.46281 1.60428 1.09773 1.18739 1.22707 0.97125 0.98439 0.79714 0.89697 1.23311 1.01313 0.93713 0.99833 1.23694 0.90449 0.92715 0.88077 0.82991 1.23044 1.00640 0.95212 0.98728 1.22964 0.98250 0.96965 0.98862 1.23266 0.92235 0.94574 0.87975 0.89780 1.46509 1.73625 1.05893 1.04925 1.19114 1.35516 0.95979 0.83164 0.90299 1.24695 1.02067 0.95629 0.98359 1.69481 1.51564 1.01899 1.34173 0.85963 0.77576 0.77377 0.84388 1.20578 1.21780 1.21836 1.20339 0.88002 0.84664 0.75557 1.90756 1.78078 1.20707 1.49926 0.89754 0.91992 0.91814 0.90072 0.90388 0.89441 0.87045 0.76265 0.91516 0.92615 0.92689 0.93536 0.93312 0.92857 0.93645 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.09 0.79 11.14 59.85 0.67 1.45 16 2 N -0.62 -6.51 3.33 -180.29 -0.60 -7.11 16 3 C 0.10 0.84 7.34 -3.12 -0.02 0.82 16 4 C -0.12 -0.99 6.53 -25.10 -0.16 -1.16 16 5 C -0.15 -1.69 3.33 -91.78 -0.31 -2.00 16 6 H 0.13 1.19 8.14 -51.93 -0.42 0.76 16 7 C 0.53 7.94 7.19 -10.99 -0.08 7.86 16 8 O -0.54 -9.59 15.12 5.55 0.08 -9.50 16 9 N -0.70 -11.19 3.64 -51.40 -0.19 -11.38 16 10 C 0.13 2.43 3.13 -65.44 -0.20 2.22 16 11 H 0.08 1.79 7.58 -51.93 -0.39 1.40 16 12 C -0.14 -2.79 6.20 -24.23 -0.15 -2.94 16 13 C 0.16 3.65 4.69 -62.80 -0.29 3.36 16 14 H 0.15 4.00 5.57 -51.93 -0.29 3.71 16 15 C -0.14 -2.82 6.44 -24.23 -0.16 -2.98 16 16 C -0.13 -2.62 6.31 -24.06 -0.15 -2.77 16 17 C 0.13 2.79 5.39 -62.51 -0.34 2.45 16 18 H 0.08 1.87 8.14 -51.93 -0.42 1.45 16 19 N -0.59 -14.98 2.98 -145.47 -0.43 -15.41 16 20 C -0.21 -5.86 10.58 -15.06 -0.16 -6.02 16 21 H 0.08 2.16 7.83 -52.48 -0.41 1.75 16 22 C -0.01 -0.34 5.50 -17.43 -0.10 -0.44 16 23 N -0.92 -26.46 10.48 55.49 0.58 -25.88 16 24 Si 0.92 22.21 29.55 -169.99 -5.02 17.18 16 25 H -0.28 -6.65 7.11 56.52 0.40 -6.25 16 26 H -0.29 -7.08 7.11 56.52 0.40 -6.68 16 27 H -0.29 -7.11 7.11 56.52 0.40 -6.71 16 28 C 0.53 6.79 7.24 -10.86 -0.08 6.71 16 29 O -0.52 -8.22 17.17 5.56 0.10 -8.12 16 30 H 0.08 0.81 7.53 -51.93 -0.39 0.42 16 31 H 0.06 0.37 8.14 -51.93 -0.42 -0.05 16 32 H 0.06 0.48 8.14 -51.93 -0.42 0.06 16 33 H 0.08 0.45 8.14 -51.93 -0.42 0.03 16 34 H 0.08 0.73 8.14 -51.93 -0.42 0.31 16 35 H 0.09 0.51 8.14 -51.93 -0.42 0.09 16 36 H 0.11 1.05 6.92 -51.93 -0.36 0.70 16 37 H 0.40 6.02 7.70 -40.82 -0.31 5.70 16 38 H 0.07 1.37 8.14 -51.93 -0.42 0.95 16 39 H 0.06 0.95 7.38 -51.93 -0.38 0.56 16 40 H 0.05 1.20 8.14 -51.93 -0.42 0.78 16 41 H 0.05 0.85 7.81 -51.93 -0.41 0.44 16 42 H 0.05 1.00 8.14 -51.93 -0.42 0.58 16 43 H 0.05 0.99 6.40 -51.93 -0.33 0.66 16 44 H 0.25 7.04 8.31 -40.82 -0.34 6.70 16 LS Contribution 349.07 15.07 5.26 5.26 Total: -1.00 -32.64 349.07 -8.40 -41.04 By element: Atomic # 1 Polarization: 14.00 SS G_CDS: -6.64 Total: 7.36 kcal Atomic # 6 Polarization: 8.10 SS G_CDS: -1.53 Total: 6.57 kcal Atomic # 7 Polarization: -59.15 SS G_CDS: -0.64 Total: -59.79 kcal Atomic # 8 Polarization: -17.80 SS G_CDS: 0.18 Total: -17.62 kcal Atomic # 14 Polarization: 22.21 SS G_CDS: -5.02 Total: 17.18 kcal Total LS contribution 5.26 Total: 5.26 kcal Total: -32.64 -8.40 -41.04 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001095889277.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 27.583 kcal (2) G-P(sol) polarization free energy of solvation -32.643 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -5.060 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.400 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.043 kcal (6) G-S(sol) free energy of system = (1) + (5) -13.460 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds