Wall clock time and date at job start Fri Apr 10 2020 17:58:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 N 1.46498 * 109.47426 * 2 1 4 4 C 1.35315 * 125.87044 * 125.00240 * 3 2 1 5 5 C 1.35353 * 106.17299 * 180.02562 * 4 3 2 6 6 C 1.50699 * 126.75036 * 179.97438 * 5 4 3 7 7 C 1.50698 * 109.47078 * 125.00318 * 6 5 4 8 8 O 1.21283 * 120.00031 * 359.97438 * 7 6 5 9 9 N 1.34779 * 119.99863 * 180.02562 * 7 6 5 10 10 C 1.47423 * 125.65136 * 359.94184 * 9 7 6 11 11 C 1.54907 * 104.83389 * 155.92354 * 10 9 7 12 12 C 1.55154 * 101.58028 * 37.00608 * 11 10 9 13 13 H 1.09002 * 110.71758 * 82.86829 * 12 11 10 14 14 N 1.46504 * 110.72115 * 206.13249 * 12 11 10 15 15 C 1.36935 * 120.00499 * 268.52945 * 14 12 11 16 16 H 1.08004 * 119.99410 * 359.97438 * 15 14 12 17 17 C 1.38809 * 120.00015 * 180.02562 * 15 14 12 18 18 N 1.31618 * 120.00384 * 359.97438 * 17 15 14 19 19 Si 1.86798 * 119.99707 * 179.97438 * 17 15 14 20 20 H 1.48502 * 109.47464 * 59.99877 * 19 17 15 21 21 H 1.48504 * 109.47090 * 179.97438 * 19 17 15 22 22 H 1.48495 * 109.47323 * 299.99694 * 19 17 15 23 23 C 1.47026 * 125.64538 * 179.97438 * 9 7 6 24 24 H 1.09005 * 110.01070 * 61.52249 * 23 9 7 25 25 C 1.52997 * 109.88309 * 300.42781 * 23 9 7 26 26 N 1.33773 * 106.49631 * 0.26268 * 5 4 3 27 27 N 1.28630 * 108.88834 * 359.56284 * 26 5 4 28 28 H 1.09001 * 109.46818 * 300.00453 * 1 2 3 29 29 H 1.08999 * 109.47077 * 59.99921 * 1 2 3 30 30 H 1.08991 * 109.47341 * 180.02562 * 1 2 3 31 31 H 1.09005 * 109.47243 * 239.99779 * 2 1 3 32 32 H 1.08999 * 109.47077 * 120.00078 * 2 1 3 33 33 H 1.07992 * 126.90945 * 359.97438 * 4 3 2 34 34 H 1.09005 * 109.46687 * 5.00419 * 6 5 4 35 35 H 1.09001 * 109.47490 * 245.00430 * 6 5 4 36 36 H 1.09001 * 110.36690 * 37.08054 * 10 9 7 37 37 H 1.08999 * 110.45546 * 274.80806 * 10 9 7 38 38 H 1.09000 * 111.00056 * 278.93619 * 11 10 9 39 39 H 1.08999 * 111.03738 * 155.09946 * 11 10 9 40 40 H 0.97002 * 119.99396 * 88.52547 * 14 12 11 41 41 H 0.96998 * 120.00318 * 180.02562 * 18 17 15 42 42 H 1.09002 * 109.47153 * 302.19087 * 25 23 9 43 43 H 1.09001 * 109.46832 * 182.19278 * 25 23 9 44 44 H 1.09004 * 109.47261 * 62.19259 * 25 23 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0184 1.3812 0.0000 4 6 2.8757 1.9190 0.8982 5 6 3.0534 3.2078 0.5248 6 6 3.9219 4.2328 1.2075 7 6 4.8932 4.8118 0.2114 8 8 4.8817 4.4294 -0.9395 9 7 5.7755 5.7538 0.5997 10 6 5.8982 6.3072 1.9606 11 6 7.3547 6.8277 2.0472 12 6 7.5715 7.3860 0.6159 13 1 7.1666 8.3944 0.5299 14 7 8.9927 7.3646 0.2609 15 6 9.7779 8.4578 0.5128 16 1 9.3494 9.3360 0.9728 17 6 11.1244 8.4377 0.1760 18 7 11.6465 7.3676 -0.3851 19 14 12.1953 9.9292 0.5190 20 1 12.1943 10.2149 1.9763 21 1 13.5840 9.6554 0.0697 22 1 11.6593 11.1030 -0.2158 23 6 6.7744 6.4002 -0.2640 24 1 6.2772 6.9410 -1.0693 25 6 7.7162 5.3461 -0.8493 26 7 2.3014 3.3945 -0.5657 27 7 1.7052 2.2918 -0.8542 28 1 -0.3633 0.5139 0.8900 29 1 -0.3633 0.5138 -0.8900 30 1 -0.3633 -1.0276 0.0005 31 1 1.8933 -0.5139 -0.8900 32 1 1.8933 -0.5138 0.8900 33 1 3.3267 1.4204 1.7434 34 1 4.4734 3.7588 2.0195 35 1 3.2961 5.0294 1.6099 36 1 5.7290 5.5279 2.7037 37 1 5.1935 7.1263 2.1037 38 1 8.0484 6.0139 2.2583 39 1 7.4441 7.6179 2.7926 40 1 9.3774 6.5760 -0.1525 41 1 12.5875 7.3534 -0.6201 42 1 8.1961 4.7974 -0.0389 43 1 8.4771 5.8361 -1.4569 44 1 7.1465 4.6539 -1.4693 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000986601064.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 17:58:43 Heat of formation + Delta-G solvation = 86.091243 kcal Electronic energy + Delta-G solvation = -25145.970105 eV Core-core repulsion = 21522.450651 eV Total energy + Delta-G solvation = -3623.519454 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 307.175 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -43.35084 -39.86981 -37.45667 -35.72818 -34.13694 -32.84655 -31.54239 -31.08882 -30.61815 -29.23004 -27.71346 -25.15570 -24.95770 -23.54916 -22.66489 -21.98886 -21.23708 -19.51751 -18.50919 -17.59768 -17.41847 -16.92118 -16.38629 -15.73435 -15.31966 -14.92532 -14.86309 -14.58398 -14.20431 -13.85641 -13.65210 -13.20826 -13.09391 -12.97990 -12.73567 -12.36835 -12.24928 -12.09003 -11.98235 -11.73004 -11.57675 -11.48863 -11.14138 -10.94323 -10.80649 -10.78773 -10.40636 -10.20050 -10.14525 -9.97279 -9.70641 -9.51455 -9.16545 -8.92664 -8.28211 -7.00718 -5.79949 -3.09618 1.46719 2.13448 2.46358 2.93688 3.30615 3.42817 3.47699 3.48478 3.99261 4.22567 4.34141 4.56864 4.58238 4.62764 4.69388 4.91700 5.03411 5.09008 5.11443 5.21302 5.31439 5.37411 5.44943 5.54050 5.59799 5.63844 5.69045 5.76066 5.88855 6.00062 6.12739 6.15426 6.28155 6.38329 6.43325 6.59653 6.63950 6.77786 6.91103 7.04099 7.67241 7.87877 8.38448 8.47671 8.50401 9.50034 10.05712 10.40674 11.42423 Molecular weight = 307.17amu Principal moments of inertia in cm(-1) A = 0.043779 B = 0.002457 C = 0.002409 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 639.425820 B =11392.102973 C =11620.673059 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.167 4.167 2 C 0.112 3.888 3 N -0.295 5.295 4 C -0.048 4.048 5 C -0.002 4.002 6 C -0.050 4.050 7 C 0.528 3.472 8 O -0.525 6.525 9 N -0.612 5.612 10 C 0.097 3.903 11 C -0.154 4.154 12 C 0.173 3.827 13 H 0.065 0.935 14 N -0.716 5.716 15 C -0.244 4.244 16 H 0.071 0.929 17 C -0.011 4.011 18 N -0.932 5.932 19 Si 0.909 3.091 20 H -0.286 1.286 21 H -0.291 1.291 22 H -0.285 1.285 23 C 0.129 3.871 24 H 0.070 0.930 25 C -0.157 4.157 26 N -0.238 5.238 27 N -0.087 5.087 28 H 0.063 0.937 29 H 0.075 0.925 30 H 0.082 0.918 31 H 0.098 0.902 32 H 0.104 0.896 33 H 0.189 0.811 34 H 0.108 0.892 35 H 0.108 0.892 36 H 0.067 0.933 37 H 0.065 0.935 38 H 0.074 0.926 39 H 0.075 0.925 40 H 0.391 0.609 41 H 0.257 0.743 42 H 0.053 0.947 43 H 0.079 0.921 44 H 0.058 0.942 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -20.482 -14.552 8.213 26.433 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.225 4.225 2 C -0.008 4.008 3 N -0.089 5.089 4 C -0.199 4.199 5 C -0.141 4.141 6 C -0.092 4.092 7 C 0.315 3.685 8 O -0.400 6.400 9 N -0.347 5.347 10 C -0.026 4.026 11 C -0.196 4.196 12 C 0.061 3.939 13 H 0.083 0.917 14 N -0.359 5.359 15 C -0.375 4.375 16 H 0.089 0.911 17 C -0.208 4.208 18 N -0.579 5.579 19 Si 0.740 3.260 20 H -0.213 1.213 21 H -0.217 1.217 22 H -0.212 1.212 23 C 0.025 3.975 24 H 0.088 0.912 25 C -0.215 4.215 26 N -0.105 5.105 27 N -0.066 5.066 28 H 0.082 0.918 29 H 0.094 0.906 30 H 0.100 0.900 31 H 0.117 0.883 32 H 0.123 0.877 33 H 0.206 0.794 34 H 0.126 0.874 35 H 0.126 0.874 36 H 0.086 0.914 37 H 0.084 0.916 38 H 0.092 0.908 39 H 0.094 0.906 40 H 0.229 0.771 41 H 0.067 0.933 42 H 0.072 0.928 43 H 0.097 0.903 44 H 0.077 0.923 Dipole moment (debyes) X Y Z Total from point charges -21.267 -14.371 6.296 26.428 hybrid contribution 1.452 0.088 1.220 1.899 sum -19.815 -14.283 7.515 25.556 Atomic orbital electron populations 1.22076 0.92722 1.03619 1.04082 1.22066 0.96879 0.76691 1.05212 1.47414 1.30851 1.11988 1.18685 1.23279 1.00916 0.95424 1.00273 1.21251 1.02155 0.93969 0.96719 1.19866 0.95325 0.96874 0.97095 1.19867 0.80656 0.79014 0.88936 1.90732 1.70144 1.59699 1.19432 1.48584 1.34781 1.39590 1.11766 1.22370 0.98992 0.97793 0.83456 1.23548 0.93285 1.01319 1.01403 1.21184 0.86636 0.95552 0.90509 0.91660 1.42657 1.02464 1.17893 1.72917 1.19212 0.90647 0.93893 1.33776 0.91097 1.24759 0.97062 0.97614 1.01341 1.69649 1.13004 1.28033 1.47241 0.86246 0.79728 0.82221 0.77823 1.21253 1.21730 1.21214 1.21841 0.88603 0.94055 0.93020 0.91183 1.21988 0.99408 0.98842 1.01282 1.75125 1.07635 1.15602 1.12091 1.78291 1.21001 0.92787 1.14567 0.91763 0.90596 0.89950 0.88331 0.87743 0.79390 0.87426 0.87385 0.91428 0.91635 0.90775 0.90644 0.77126 0.93349 0.92767 0.90272 0.92286 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -0.75 10.04 37.16 0.37 -0.38 16 2 C 0.11 0.57 7.17 -4.04 -0.03 0.55 16 3 N -0.30 -3.00 3.44 -61.26 -0.21 -3.21 16 4 C -0.05 -0.46 11.49 -17.04 -0.20 -0.66 16 5 C 0.00 -0.03 6.00 -82.78 -0.50 -0.52 16 6 C -0.05 -0.56 5.29 -29.04 -0.15 -0.71 16 7 C 0.53 8.42 7.62 -10.99 -0.08 8.33 16 8 O -0.52 -10.66 14.52 5.56 0.08 -10.58 16 9 N -0.61 -9.48 3.08 -163.02 -0.50 -9.99 16 10 C 0.10 1.21 6.69 -2.53 -0.02 1.19 16 11 C -0.15 -2.45 6.77 -24.59 -0.17 -2.61 16 12 C 0.17 3.34 3.48 -66.10 -0.23 3.11 16 13 H 0.07 1.26 8.09 -51.93 -0.42 0.84 16 14 N -0.72 -17.38 4.94 -51.65 -0.26 -17.63 16 15 C -0.24 -6.56 9.96 -15.06 -0.15 -6.71 16 16 H 0.07 1.83 7.83 -52.48 -0.41 1.42 16 17 C -0.01 -0.32 5.50 -17.43 -0.10 -0.42 16 18 N -0.93 -27.68 13.06 55.49 0.72 -26.95 16 19 Si 0.91 21.99 29.55 -169.99 -5.02 16.97 16 20 H -0.29 -6.77 7.11 56.52 0.40 -6.37 16 21 H -0.29 -7.15 7.11 56.52 0.40 -6.75 16 22 H -0.29 -6.82 7.11 56.52 0.40 -6.42 16 23 C 0.13 2.35 3.48 -66.96 -0.23 2.12 16 24 H 0.07 1.35 8.14 -51.93 -0.42 0.92 16 25 C -0.16 -3.07 7.93 37.16 0.29 -2.77 16 26 N -0.24 -3.89 11.84 33.29 0.39 -3.50 16 27 N -0.09 -1.25 12.91 60.35 0.78 -0.47 16 28 H 0.06 0.32 8.14 -51.93 -0.42 -0.11 16 29 H 0.07 0.48 8.12 -51.93 -0.42 0.06 16 30 H 0.08 0.18 8.14 -51.93 -0.42 -0.25 16 31 H 0.10 0.44 8.14 -51.93 -0.42 0.02 16 32 H 0.10 0.21 8.07 -51.93 -0.42 -0.20 16 33 H 0.19 0.96 8.06 -52.49 -0.42 0.54 16 34 H 0.11 0.84 7.83 -51.93 -0.41 0.43 16 35 H 0.11 1.01 8.14 -51.93 -0.42 0.58 16 36 H 0.07 0.65 7.48 -51.93 -0.39 0.26 16 37 H 0.07 0.71 8.14 -51.93 -0.42 0.29 16 38 H 0.07 1.28 8.14 -51.93 -0.42 0.86 16 39 H 0.07 1.13 8.14 -51.93 -0.42 0.71 16 40 H 0.39 10.07 5.06 -40.82 -0.21 9.86 16 41 H 0.26 7.42 8.31 -40.82 -0.34 7.08 16 42 H 0.05 1.06 8.04 -51.93 -0.42 0.64 16 43 H 0.08 1.69 6.76 -51.93 -0.35 1.34 16 44 H 0.06 1.18 6.77 -51.93 -0.35 0.83 16 LS Contribution 361.62 15.07 5.45 5.45 Total: -1.00 -36.34 361.62 -6.48 -42.82 By element: Atomic # 1 Polarization: 13.31 SS G_CDS: -6.73 Total: 6.57 kcal Atomic # 6 Polarization: 1.70 SS G_CDS: -1.18 Total: 0.52 kcal Atomic # 7 Polarization: -62.67 SS G_CDS: 0.93 Total: -61.74 kcal Atomic # 8 Polarization: -10.66 SS G_CDS: 0.08 Total: -10.58 kcal Atomic # 14 Polarization: 21.99 SS G_CDS: -5.02 Total: 16.97 kcal Total LS contribution 5.45 Total: 5.45 kcal Total: -36.34 -6.48 -42.82 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000986601064.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 128.912 kcal (2) G-P(sol) polarization free energy of solvation -36.342 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 92.570 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.479 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.821 kcal (6) G-S(sol) free energy of system = (1) + (5) 86.091 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds