Wall clock time and date at job start Fri Apr 10 2020 17:59:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.53001 * 109.47162 * 2 1 4 4 H 1.09001 * 109.46672 * 304.99447 * 3 2 1 5 5 C 1.52996 * 109.47108 * 185.00168 * 3 2 1 6 6 N 1.46500 * 109.47464 * 64.99812 * 3 2 1 7 7 C 1.46500 * 120.00014 * 59.99815 * 6 3 2 8 8 C 1.34772 * 119.99834 * 240.00267 * 6 3 2 9 9 O 1.21389 * 120.00402 * 356.43677 * 8 6 3 10 10 C 1.49246 * 120.00000 * 176.43546 * 8 6 3 11 11 O 1.21739 * 119.99735 * 5.92793 * 10 8 6 12 12 N 1.33171 * 120.00090 * 185.92534 * 10 8 6 13 13 C 1.33375 * 119.99988 * 180.02562 * 12 10 8 14 14 C 1.40856 * 126.35502 * 0.02562 * 13 12 10 15 15 C 1.35298 * 108.22715 * 180.02562 * 14 13 12 16 16 N 1.36224 * 108.88108 * 359.97438 * 15 14 13 17 17 C 1.46497 * 125.86100 * 180.02562 * 16 15 14 18 18 C 1.50703 * 109.47264 * 84.97409 * 17 16 15 19 19 H 1.08007 * 119.99644 * 0.02562 * 18 17 16 20 20 C 1.37871 * 120.00077 * 179.97438 * 18 17 16 21 21 N 1.31516 * 119.99931 * 0.02562 * 20 18 17 22 22 Si 1.86805 * 120.00046 * 180.02562 * 20 18 17 23 23 H 1.48503 * 109.46877 * 60.00311 * 22 20 18 24 24 H 1.48496 * 109.47013 * 180.02562 * 22 20 18 25 25 H 1.48503 * 109.47093 * 300.00268 * 22 20 18 26 26 N 1.37286 * 126.35385 * 179.71624 * 13 12 10 27 27 H 0.96998 * 126.33837 * 0.02562 * 26 13 12 28 28 H 1.09000 * 109.47044 * 60.00213 * 1 2 3 29 29 H 1.08996 * 109.47068 * 180.02562 * 1 2 3 30 30 H 1.08997 * 109.47169 * 300.00700 * 1 2 3 31 31 H 1.08999 * 109.46771 * 119.99310 * 2 1 3 32 32 H 1.08997 * 109.47609 * 239.99604 * 2 1 3 33 33 H 1.09001 * 109.47534 * 180.02562 * 5 3 2 34 34 H 1.09001 * 109.46764 * 299.99222 * 5 3 2 35 35 H 1.08993 * 109.47655 * 59.99251 * 5 3 2 36 36 H 1.08998 * 109.46854 * 95.99573 * 7 6 3 37 37 H 1.09001 * 109.47129 * 215.99053 * 7 6 3 38 38 H 1.08998 * 109.47198 * 335.99240 * 7 6 3 39 39 H 1.07999 * 125.88154 * 359.97438 * 14 13 12 40 40 H 1.07998 * 125.56031 * 180.02562 * 15 14 13 41 41 H 1.08994 * 109.47080 * 204.97986 * 17 16 15 42 42 H 1.09005 * 109.47129 * 324.97905 * 17 16 15 43 43 H 0.97003 * 119.99626 * 180.02562 * 21 20 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 1 1.6054 1.9815 -0.8419 5 6 3.5648 1.4443 -0.1258 6 7 1.6524 2.0976 1.2518 7 6 2.1138 1.5591 2.5337 8 6 0.8714 3.1955 1.2240 9 8 0.5423 3.6796 0.1605 10 6 0.4110 3.8164 2.5007 11 8 0.8270 3.3980 3.5656 12 7 -0.4547 4.8279 2.4751 13 6 -0.8657 5.3830 3.6160 14 6 -0.4729 5.0085 4.9158 15 6 -1.1108 5.8112 5.7985 16 7 -1.8968 6.6858 5.1108 17 6 -2.7489 7.7210 5.7012 18 6 -1.9300 8.9598 5.9576 19 1 -0.8799 8.9747 5.7056 20 6 -2.5216 10.0745 6.5130 21 7 -3.8004 10.0565 6.8194 22 14 -1.5066 11.6104 6.8302 23 1 -0.9428 12.1045 5.5483 24 1 -2.3704 12.6596 7.4287 25 1 -0.3998 11.2877 7.7662 26 7 -1.7456 6.4294 3.7413 27 1 -2.1839 6.9018 3.0163 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3633 -1.0276 0.0005 30 1 -0.3633 0.5139 0.8899 31 1 1.8933 -0.5137 0.8901 32 1 1.8934 -0.5139 -0.8899 33 1 3.9283 2.4720 -0.1253 34 1 3.9994 0.9054 0.7161 35 1 3.8532 0.9569 -1.0570 36 1 3.0083 2.0945 2.8518 37 1 1.3312 1.6822 3.2823 38 1 2.3452 0.4999 2.4208 39 1 0.2178 4.2164 5.1648 40 1 -1.0123 5.7665 6.8731 41 1 -3.5613 7.9581 5.0143 42 1 -3.1628 7.3579 6.6420 43 1 -4.2167 10.8409 7.2098 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000444496125.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 10 2020 17:59:46 Heat of formation + Delta-G solvation = 40.758326 kcal Electronic energy + Delta-G solvation = -25131.318386 eV Core-core repulsion = 21408.114487 eV Total energy + Delta-G solvation = -3723.203899 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 308.164 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -41.08004 -40.09489 -38.03444 -36.53161 -34.47257 -33.31329 -32.63162 -31.23973 -30.80366 -30.07444 -27.19619 -26.69661 -25.08061 -23.75138 -22.97615 -21.64698 -21.43580 -19.97112 -18.79199 -17.27952 -16.96455 -16.84053 -16.16350 -15.72251 -15.54968 -15.08368 -14.84447 -14.37480 -14.31577 -14.02367 -13.83371 -13.45512 -13.25077 -13.09186 -13.00826 -12.70156 -12.48642 -12.29958 -12.23223 -11.98942 -11.79691 -11.43164 -11.25501 -11.09719 -11.08333 -10.87656 -10.60799 -10.58551 -10.49094 -9.71061 -9.19766 -9.07642 -8.98026 -8.55400 -8.23774 -7.16438 -6.58483 -4.73733 1.27056 1.85374 2.37406 2.98671 3.03789 3.09775 3.12757 3.19143 3.99322 4.14243 4.45201 4.52804 4.74064 4.77084 4.93541 4.99255 5.09079 5.26159 5.30268 5.41905 5.49554 5.62909 5.69497 5.76289 5.78020 5.84116 5.85015 6.01503 6.05376 6.11066 6.17154 6.26032 6.37088 6.43529 6.56478 6.71463 7.23571 7.30986 7.38153 7.42073 7.45168 7.74941 8.00356 8.32899 8.36078 8.97574 9.11931 10.45537 Molecular weight = 308.16amu Principal moments of inertia in cm(-1) A = 0.032303 B = 0.002516 C = 0.002488 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 866.573587 B =11126.991614 C =11251.338046 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C -0.132 4.132 3 C 0.130 3.870 4 H 0.100 0.900 5 C -0.159 4.159 6 N -0.595 5.595 7 C 0.070 3.930 8 C 0.525 3.475 9 O -0.513 6.513 10 C 0.487 3.513 11 O -0.568 6.568 12 N -0.664 5.664 13 C 0.464 3.536 14 C -0.329 4.329 15 C 0.166 3.834 16 N -0.330 5.330 17 C 0.251 3.749 18 C -0.562 4.562 19 H 0.070 0.930 20 C 0.072 3.928 21 N -0.885 5.885 22 Si 0.911 3.089 23 H -0.273 1.273 24 H -0.282 1.282 25 H -0.271 1.271 26 N -0.457 5.457 27 H 0.449 0.551 28 H 0.055 0.945 29 H 0.052 0.948 30 H 0.055 0.945 31 H 0.066 0.934 32 H 0.072 0.928 33 H 0.059 0.941 34 H 0.058 0.942 35 H 0.065 0.935 36 H 0.051 0.949 37 H 0.109 0.891 38 H 0.056 0.944 39 H 0.187 0.813 40 H 0.192 0.808 41 H 0.054 0.946 42 H 0.072 0.928 43 H 0.274 0.726 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.397 -15.109 -5.247 17.622 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C -0.170 4.170 3 C 0.027 3.973 4 H 0.118 0.882 5 C -0.217 4.217 6 N -0.331 5.331 7 C -0.072 4.072 8 C 0.308 3.692 9 O -0.387 6.387 10 C 0.268 3.732 11 O -0.451 6.451 12 N -0.429 5.429 13 C 0.216 3.784 14 C -0.361 4.361 15 C 0.018 3.982 16 N -0.114 5.114 17 C 0.135 3.865 18 C -0.600 4.600 19 H 0.088 0.912 20 C -0.134 4.134 21 N -0.521 5.521 22 Si 0.737 3.263 23 H -0.198 1.198 24 H -0.207 1.207 25 H -0.196 1.196 26 N -0.179 5.179 27 H 0.296 0.704 28 H 0.074 0.926 29 H 0.071 0.929 30 H 0.074 0.926 31 H 0.085 0.915 32 H 0.090 0.910 33 H 0.078 0.922 34 H 0.077 0.923 35 H 0.084 0.916 36 H 0.070 0.930 37 H 0.127 0.873 38 H 0.074 0.926 39 H 0.204 0.796 40 H 0.209 0.791 41 H 0.072 0.928 42 H 0.090 0.910 43 H 0.083 0.917 Dipole moment (debyes) X Y Z Total from point charges 6.730 -14.374 -5.927 16.942 hybrid contribution 0.542 0.942 0.466 1.182 sum 7.272 -13.432 -5.461 16.221 Atomic orbital electron populations 1.21718 0.95366 1.01204 1.02466 1.21891 0.96764 0.96002 1.02334 1.21162 0.94919 0.93304 0.87895 0.88181 1.22115 0.95123 1.02490 1.01994 1.47777 1.49941 1.27768 1.07585 1.22294 1.02270 0.97345 0.85308 1.20074 0.78520 0.80373 0.90187 1.90663 1.55174 1.61099 1.31797 1.20218 0.81962 0.83363 0.87653 1.90491 1.58890 1.63656 1.32086 1.68704 1.28574 1.21446 1.24217 1.19142 0.83952 0.83555 0.91723 1.22512 1.12970 1.09965 0.90666 1.22992 0.88486 0.87489 0.99225 1.48198 1.39772 1.30830 0.92566 1.20186 0.88745 0.83179 0.94390 1.21338 0.96954 0.96908 1.44819 0.91165 1.24951 0.95191 0.99087 0.94171 1.69884 1.10374 1.31126 1.40758 0.86319 0.79796 0.81097 0.79046 1.19774 1.20735 1.19617 1.44667 1.42865 1.31821 0.98516 0.70359 0.92597 0.92898 0.92616 0.91526 0.90979 0.92221 0.92299 0.91600 0.93021 0.87274 0.92571 0.79639 0.79075 0.92774 0.91005 0.91661 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.60 9.80 37.16 0.36 -1.23 16 2 C -0.13 -1.24 5.36 -26.73 -0.14 -1.38 16 3 C 0.13 1.53 2.63 -67.93 -0.18 1.35 16 4 H 0.10 1.36 6.90 -51.93 -0.36 1.00 16 5 C -0.16 -1.51 9.19 37.16 0.34 -1.17 16 6 N -0.59 -8.50 2.21 -174.52 -0.39 -8.89 16 7 C 0.07 0.86 8.57 59.85 0.51 1.38 16 8 C 0.52 9.64 7.73 -11.68 -0.09 9.55 16 9 O -0.51 -10.69 16.25 5.46 0.09 -10.60 16 10 C 0.49 9.58 7.66 -12.39 -0.09 9.49 16 11 O -0.57 -10.69 10.05 5.15 0.05 -10.64 16 12 N -0.66 -13.69 10.34 -11.99 -0.12 -13.81 16 13 C 0.46 8.78 8.07 -155.17 -1.25 7.53 16 14 C -0.33 -5.63 9.52 -39.64 -0.38 -6.01 16 15 C 0.17 2.56 11.46 -16.65 -0.19 2.37 16 16 N -0.33 -5.78 3.63 -62.22 -0.23 -6.00 16 17 C 0.25 4.99 6.19 -5.19 -0.03 4.95 16 18 C -0.56 -12.93 9.39 -34.44 -0.32 -13.26 16 19 H 0.07 1.66 7.81 -52.48 -0.41 1.25 16 20 C 0.07 1.70 5.46 -17.82 -0.10 1.61 16 21 N -0.89 -21.95 13.29 55.43 0.74 -21.22 16 22 Si 0.91 18.89 29.54 -169.99 -5.02 13.87 16 23 H -0.27 -5.72 7.11 56.52 0.40 -5.32 16 24 H -0.28 -5.81 7.11 56.52 0.40 -5.41 16 25 H -0.27 -5.58 7.11 56.52 0.40 -5.17 16 26 N -0.46 -7.96 7.37 31.31 0.23 -7.73 16 27 H 0.45 7.02 8.96 -182.56 -1.64 5.38 16 28 H 0.05 0.63 8.14 -51.93 -0.42 0.20 16 29 H 0.05 0.47 8.14 -51.93 -0.42 0.05 16 30 H 0.05 0.71 7.75 -51.93 -0.40 0.30 16 31 H 0.07 0.58 6.50 -51.93 -0.34 0.24 16 32 H 0.07 0.55 8.14 -51.93 -0.42 0.13 16 33 H 0.06 0.64 8.14 -51.93 -0.42 0.22 16 34 H 0.06 0.51 7.67 -51.93 -0.40 0.11 16 35 H 0.07 0.50 8.14 -51.93 -0.42 0.08 16 36 H 0.05 0.64 8.14 -51.93 -0.42 0.21 16 37 H 0.11 1.55 5.35 -51.94 -0.28 1.27 16 38 H 0.06 0.54 6.36 -51.93 -0.33 0.21 16 39 H 0.19 3.18 5.77 -52.49 -0.30 2.88 16 40 H 0.19 2.23 8.06 -52.49 -0.42 1.81 16 41 H 0.05 1.12 8.14 -51.93 -0.42 0.70 16 42 H 0.07 1.42 8.14 -51.93 -0.42 1.00 16 43 H 0.27 6.49 8.31 -40.82 -0.34 6.15 16 LS Contribution 359.60 15.07 5.42 5.42 Total: -1.00 -28.95 359.60 -8.19 -37.14 By element: Atomic # 1 Polarization: 14.68 SS G_CDS: -7.39 Total: 7.28 kcal Atomic # 6 Polarization: 16.74 SS G_CDS: -1.56 Total: 15.18 kcal Atomic # 7 Polarization: -57.88 SS G_CDS: 0.23 Total: -57.65 kcal Atomic # 8 Polarization: -21.38 SS G_CDS: 0.14 Total: -21.24 kcal Atomic # 14 Polarization: 18.89 SS G_CDS: -5.02 Total: 13.87 kcal Total LS contribution 5.42 Total: 5.42 kcal Total: -28.95 -8.19 -37.14 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000444496125.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 77.899 kcal (2) G-P(sol) polarization free energy of solvation -28.954 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 48.945 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.186 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.140 kcal (6) G-S(sol) free energy of system = (1) + (5) 40.758 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds